RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 TGIF2LYQ8IUE0 185 aa17.89■□□□□ 0.45
TMEFF1-201ENST00000374879 ODF3L1Q8IXM7 274 aa17.89■□□□□ 0.45
TMEFF1-201ENST00000374879 MRGPRX4Q96LA9 322 aa17.89■□□□□ 0.45
TMEFF1-201ENST00000374879 OR2J1Q9GZK6 312 aa17.89■□□□□ 0.45
TMEFF1-201ENST00000374879 HRASLS2Q9NWW9 162 aa17.89■□□□□ 0.45
TMEFF1-201ENST00000374879 ZNF319Q9P2F9 582 aa17.89■□□□□ 0.45
TMEFF1-201ENST00000374879 NKX2-6A6NCS4 301 aa17.88■□□□□ 0.45
TMEFF1-201ENST00000374879 HNRNPA2B1P22626 353 aaKnown RBP17.88■□□□□ 0.45
TMEFF1-201ENST00000374879 TFF2Q03403 129 aa17.88■□□□□ 0.45
TMEFF1-201ENST00000374879 SMAD4Q13485 552 aaKnown RBP17.88■□□□□ 0.45
TMEFF1-201ENST00000374879 TDRG1Q3Y452 100 aa17.88■□□□□ 0.45
TMEFF1-201ENST00000374879 MEX3BQ6ZN04 569 aaKnown RBP17.88■□□□□ 0.45
TMEFF1-201ENST00000374879 PRR22Q8IZ63 422 aa17.88■□□□□ 0.45
TMEFF1-201ENST00000374879 PTPMT1Q8WUK0 201 aaPredicted RBP17.88■□□□□ 0.45
TMEFF1-201ENST00000374879 SLC2A9Q9NRM0 540 aa17.88■□□□□ 0.45
TMEFF1-201ENST00000374879 CCDC163A0A0D9SF12 145 aa17.88■□□□□ 0.45
TMEFF1-201ENST00000374879 PHF1O43189 567 aaPredicted RBP17.88■□□□□ 0.45
TMEFF1-201ENST00000374879 SSSCA1O60232 199 aa17.88■□□□□ 0.45
TMEFF1-201ENST00000374879 PPP1CAP62136 330 aa17.88■□□□□ 0.45
TMEFF1-201ENST00000374879 ARL6IP1Q15041 203 aa17.88■□□□□ 0.45
TMEFF1-201ENST00000374879 ZNF100Q8IYN0 542 aa17.88■□□□□ 0.45
TMEFF1-201ENST00000374879 SDSLQ96GA7 329 aa17.88■□□□□ 0.45
TMEFF1-201ENST00000374879 ZNF850A8MQ14 1090 aa17.87■□□□□ 0.45
TMEFF1-201ENST00000374879 IGHMP01871 453 aa17.87■□□□□ 0.45
TMEFF1-201ENST00000374879 GALR1P47211 349 aa17.87■□□□□ 0.45
TMEFF1-201ENST00000374879 DCAF7P61962 342 aa17.87■□□□□ 0.45
TMEFF1-201ENST00000374879 ACTL10Q5JWF8 245 aa17.87■□□□□ 0.45
TMEFF1-201ENST00000374879 C11orf40Q8WZ69 217 aa17.87■□□□□ 0.45
TMEFF1-201ENST00000374879 CCDC3Q9BQI4 270 aa17.87■□□□□ 0.45
TMEFF1-201ENST00000374879 HIPK2Q9H2X6 1198 aa17.87■□□□□ 0.45
TMEFF1-201ENST00000374879 MYO9BQ13459 2157 aa17.87■□□□□ 0.45
TMEFF1-201ENST00000374879 A0A1W2PPQ1 181 aa17.87■□□□□ 0.45
TMEFF1-201ENST00000374879 SLC33A1O00400 549 aaPredicted RBP17.87■□□□□ 0.45
TMEFF1-201ENST00000374879 FAM3BP58499 235 aaPredicted RBP17.87■□□□□ 0.45
TMEFF1-201ENST00000374879 FUT7Q11130 342 aa17.87■□□□□ 0.45
TMEFF1-201ENST00000374879 DEFB110Q30KQ9 67 aa17.87■□□□□ 0.45
TMEFF1-201ENST00000374879 AARDQ4LEZ3 155 aa17.87■□□□□ 0.45
TMEFF1-201ENST00000374879 ZNF784Q8NCA9 323 aaPredicted RBP17.87■□□□□ 0.45
TMEFF1-201ENST00000374879 MIEN1Q9BRT3 115 aa17.87■□□□□ 0.45
TMEFF1-201ENST00000374879 FBRSQ9HAH7 460 aa17.87■□□□□ 0.45
TMEFF1-201ENST00000374879 CLDN16Q9Y5I7 305 aa17.87■□□□□ 0.45
TMEFF1-201ENST00000374879 OPRM1P35372 400 aa17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 NKX2-1P43699 371 aaPredicted RBP17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 FGF8P55075 233 aaPredicted RBP17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 LCN15Q6UWW0 184 aa17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 MRGPRX1Q96LB2 322 aa17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 NKX2-4Q9H2Z4 354 aa17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 LYRM2Q9NU23 88 aaPredicted RBP17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 PLEKHJ1Q9NW61 149 aa17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 TRAV1-1A0A0B4J248 108 aa17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 A0A0J9YY10 115 aa17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 SHISA7A6NL88 538 aa17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 TNFRSF10CO14798 259 aa17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 CNOT4O95628 575 aaKnown RBP17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 CLPSP04118 112 aa17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 CD33P20138 364 aa17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 KISS1Q15726 138 aa17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 CRIP3Q6Q6R5 217 aa17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 C11orf42Q8N5U0 333 aa17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 ZNF321PQ8N8H1 164 aa17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 SLC38A9Q8NBW4 561 aa17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 CPEB3Q8NE35 698 aaKnown RBP17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 OR8B12Q8NGG6 310 aa17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 SSC4DQ8WTU2 575 aa17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 ELL3Q9HB65 397 aaPredicted RBP17.86■□□□□ 0.45
TMEFF1-201ENST00000374879 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 A0A1B0GUS0 222 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 TNFSF12O43508 249 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 IL33O95760 270 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 DNM1P34Q6PK57 102 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 HLA-CQ95604 372 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 NXF5Q9H1B4 397 aaKnown RBP17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 PARD6AQ9NPB6 346 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 ZNF154Q13106 437 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 ZNF787Q6DD87 383 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 H1FOOQ8IZA3 346 aaPredicted RBP17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 TMEM256Q8N2U0 113 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 MS4A10Q96PG2 267 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 TP53RKQ96S44 253 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 PRTFDC1Q9NRG1 225 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 MED29Q9NX70 200 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 PRSS50Q9UI38 385 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 ZFP30Q9Y2G7 519 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 MYO7BQ6PIF6 2116 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 TMED7-TICAM2A0A0A6YYA0 188 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 H0YIG0 161 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 NUPR1O60356 82 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 RTP5Q14D33 572 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 CXorf66Q5JRM2 361 aaPredicted RBP17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 C9orf50Q5SZB4 431 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 DPPA3Q6W0C5 159 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 ADAMTS18Q8TE60 1221 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 C22orf15Q8WYQ4 148 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 OR5B12Q96R08 314 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 SPOCK3Q9BQ16 436 aa17.85■□□□□ 0.45
TMEFF1-201ENST00000374879 KIAA2026Q5HYC2 2103 aa17.84■□□□□ 0.45
TMEFF1-201ENST00000374879 LNP1A1A4G5 178 aa17.84■□□□□ 0.45
TMEFF1-201ENST00000374879 CEBPZOSA8MTT3 80 aa17.84■□□□□ 0.45
TMEFF1-201ENST00000374879 NPIPB7O75200 414 aa17.84■□□□□ 0.45
TMEFF1-201ENST00000374879 TMEM50AO95807 157 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms