RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 SMIM17P0DL12 118 aa6.85□□□□□ -1.31
USP48-203ENST00000374732 HOXB9P17482 250 aaPredicted RBP6.85□□□□□ -1.31
USP48-203ENST00000374732 NFYAP23511 347 aaPredicted RBP6.85□□□□□ -1.31
USP48-203ENST00000374732 RAB10P61026 200 aa6.85□□□□□ -1.31
USP48-203ENST00000374732 SRPXP78539 464 aa6.85□□□□□ -1.31
USP48-203ENST00000374732 AWAT1Q58HT5 328 aa6.85□□□□□ -1.31
USP48-203ENST00000374732 AMMECR1LQ6DCA0 310 aa6.85□□□□□ -1.31
USP48-203ENST00000374732 OR5A2Q8NGI9 324 aa6.85□□□□□ -1.31
USP48-203ENST00000374732 IL22RA2Q969J5 263 aa6.85□□□□□ -1.31
USP48-203ENST00000374732 SGK494Q96LW2 274 aa6.85□□□□□ -1.31
USP48-203ENST00000374732 RASL11BQ9BPW5 248 aa6.85□□□□□ -1.31
USP48-203ENST00000374732 UQCC1Q9NVA1 299 aa6.85□□□□□ -1.31
USP48-203ENST00000374732 TAS2R16Q9NYV7 291 aa6.85□□□□□ -1.31
USP48-203ENST00000374732 MRPL27Q9P0M9 148 aaKnown RBP6.85□□□□□ -1.31
USP48-203ENST00000374732 KLHL13Q9P2N7 655 aa6.85□□□□□ -1.31
USP48-203ENST00000374732 TRBV4-1A0A0J9YWV2 114 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 NPIPB6E9PJ23 425 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 CD3EP07766 207 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 OPRD1P41143 372 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 GINS1Q14691 196 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 ZNF549Q6P9A3 640 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 Q6ZVL8 140 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 SAXO1Q8IYX7 474 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 GPR135Q8IZ08 494 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 OR1S2Q8NGQ3 325 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 SLC25A43Q8WUT9 341 aaPredicted RBP6.84□□□□□ -1.31
USP48-203ENST00000374732 ZNF419Q96HQ0 510 aaPredicted RBP6.84□□□□□ -1.31
USP48-203ENST00000374732 RASL10BQ96S79 203 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 CWH43Q9H720 699 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 TAF9BQ9HBM6 251 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 MRPL17Q9NRX2 175 aaKnown RBP6.84□□□□□ -1.31
USP48-203ENST00000374732 MARCOQ9UEW3 520 aaPredicted RBP6.84□□□□□ -1.31
USP48-203ENST00000374732 TESQ9UGI8 421 aaKnown RBP6.84□□□□□ -1.31
USP48-203ENST00000374732 V9GYH0 126 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 H3BMH7 237 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 H7BYZ3 331 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 DIRAS1O95057 198 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 TIMP1P01033 207 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 TSFMP43897 325 aaKnown RBP6.84□□□□□ -1.31
USP48-203ENST00000374732 PGFP49763 221 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 CTBP2P56545 445 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 TMEM50BP56557 158 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 MS4A13Q5J8X5 152 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 BCL2L15Q5TBC7 163 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 TBPL2Q6SJ96 375 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 OPN5Q6U736 354 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 PTGR2Q8N8N7 351 aaPredicted RBP6.84□□□□□ -1.31
USP48-203ENST00000374732 SIGLEC12Q96PQ1 595 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 PBDC1Q9BVG4 233 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 GATA5Q9BWX5 397 aaPredicted RBP6.84□□□□□ -1.31
USP48-203ENST00000374732 RBKSQ9H477 322 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 LYRM2Q9NU23 88 aaPredicted RBP6.84□□□□□ -1.31
USP48-203ENST00000374732 OSGIN2Q9Y236 505 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 HDGFL3Q9Y3E1 203 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 GREB1Q4ZG55 1949 aa6.84□□□□□ -1.31
USP48-203ENST00000374732 A0A0G2JMM0 328 aa6.84□□□□□ -1.32
USP48-203ENST00000374732 LOC285095A0A1B0GVY8 99 aa6.84□□□□□ -1.32
USP48-203ENST00000374732 A0A1W2PPB8 328 aa6.84□□□□□ -1.32
USP48-203ENST00000374732 ZNF705FA8MVS1 300 aaPredicted RBP6.84□□□□□ -1.32
USP48-203ENST00000374732 KIR3DP1A8MWS1 328 aa6.84□□□□□ -1.32
USP48-203ENST00000374732 MCRIP1C9JLW8 97 aa6.84□□□□□ -1.32
USP48-203ENST00000374732 H0YL77 283 aa6.84□□□□□ -1.32
USP48-203ENST00000374732 PRNPP04156 253 aa6.84□□□□□ -1.32
USP48-203ENST00000374732 AMY1AP04745 511 aa6.84□□□□□ -1.32
USP48-203ENST00000374732 CD1AP06126 327 aa6.84□□□□□ -1.32
USP48-203ENST00000374732 ZNF705DP0CH99 300 aaPredicted RBP6.84□□□□□ -1.32
USP48-203ENST00000374732 ZNF705BP0CI00 300 aaPredicted RBP6.84□□□□□ -1.32
USP48-203ENST00000374732 HIST1H1CP16403 213 aaKnown RBP6.84□□□□□ -1.32
USP48-203ENST00000374732 CRISP3P54108 245 aa6.84□□□□□ -1.32
USP48-203ENST00000374732 WNT3AP56704 352 aa6.84□□□□□ -1.32
USP48-203ENST00000374732 TBR1Q16650 682 aa6.84□□□□□ -1.32
USP48-203ENST00000374732 HEPN1Q6WQI6 88 aa6.84□□□□□ -1.32
USP48-203ENST00000374732 TMUB2Q71RG4 321 aa6.84□□□□□ -1.32
USP48-203ENST00000374732 OR4N5Q8IXE1 308 aa6.84□□□□□ -1.32
USP48-203ENST00000374732 OR5M3Q8NGP4 307 aa6.84□□□□□ -1.32
USP48-203ENST00000374732 LRRC58Q96CX6 371 aa6.84□□□□□ -1.32
USP48-203ENST00000374732 ATOH8Q96SQ7 321 aa6.84□□□□□ -1.32
USP48-203ENST00000374732 DUSP23Q9BVJ7 150 aa6.84□□□□□ -1.32
USP48-203ENST00000374732 TUBB1Q9H4B7 451 aa6.84□□□□□ -1.32
USP48-203ENST00000374732 PRO0628Q9UI54 55 aa6.84□□□□□ -1.32
USP48-203ENST00000374732 CHST2Q9Y4C5 530 aa6.84□□□□□ -1.32
USP48-203ENST00000374732 A0A087WWL8 130 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 IFITM5A6NNB3 132 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 C15orf65H3BRN8 121 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 EEDO75530 441 aaKnown RBP6.83□□□□□ -1.32
USP48-203ENST00000374732 TNFSF13O75888 250 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 EML2O95834 649 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 CRYAAP02489 173 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 OR10J1P30954 320 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 GABARAPL2P60520 117 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 EWSR1Q01844 656 aaKnown RBP eCLIP6.83□□□□□ -1.32
USP48-203ENST00000374732 GRHL2Q6ISB3 625 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 RPTNQ6XPR3 784 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 TBC1D26Q86UD7 250 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 GPR32P1Q8NGA4 272 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 OR5AP2Q8NGF4 316 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 VN1R17PQ8TDU5 208 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 SCAMP4Q969E2 229 aa6.83□□□□□ -1.32
USP48-203ENST00000374732 RNASE7Q9H1E1 156 aaKnown RBP6.83□□□□□ -1.32
USP48-203ENST00000374732 OR2D2Q9H210 308 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms