RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 KLRC4-KLRK1H3BQV0 150 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 PRH1P02810 166 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 RCC1P18754 421 aaPredicted RBP9.35□□□□□ -0.91
CXCL12-203ENST00000374429 ACP1P24666 158 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 PPT1P50897 306 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 PRDX4Q13162 271 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 FAM166AQ6J272 317 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 AQP3Q92482 292 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 MRPS24Q96EL2 167 aaKnown RBP9.35□□□□□ -0.91
CXCL12-203ENST00000374429 ARHGAP21Q5T5U3 1957 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 C19orf67A6NJJ6 358 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 KLK10O43240 276 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 RHBDL1O75783 438 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 SP1P08047 785 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 FGF2P09038 288 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 FTH1P19P0C7X4 201 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 WT1P19544 449 aaPredicted RBP9.35□□□□□ -0.91
CXCL12-203ENST00000374429 B3GALT5-AS1P59052 145 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 ZNF616Q08AN1 781 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 FOXO1Q12778 655 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 FAM53AQ6NSI3 398 aaPredicted RBP9.35□□□□□ -0.91
CXCL12-203ENST00000374429 ZSCAN4Q8NAM6 433 aaPredicted RBP9.35□□□□□ -0.91
CXCL12-203ENST00000374429 DMRTA2Q96SC8 542 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 GFOD1Q9NXC2 390 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 DMRT1Q9Y5R6 373 aa9.35□□□□□ -0.91
CXCL12-203ENST00000374429 CXorf65A6NEN9 183 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 TMEM14DPA8MWL7 114 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 DEFB108AA8MXU0 73 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 ONECUT2O95948 504 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 CD1AP06126 327 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 CHRM2P08172 466 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 ZNF735P0CB33 412 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 HOXC12P31275 282 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 RPS27AP62979 156 aaKnown RBP9.34□□□□□ -0.91
CXCL12-203ENST00000374429 MRPS34P82930 218 aaKnown RBP9.34□□□□□ -0.91
CXCL12-203ENST00000374429 EDDM3AQ14507 147 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 NHLRC3Q5JS37 347 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 LY6G6FQ5SQ64 297 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 OSR2Q8N2R0 312 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 SVBPQ8N300 66 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 DEFB108BQ8NET1 73 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 HAS2Q92819 552 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 MARS2Q96GW9 593 aaKnown RBP9.34□□□□□ -0.91
CXCL12-203ENST00000374429 OR2J1Q9GZK6 312 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 CHST5Q9GZS9 411 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 SLC5A7Q9GZV3 580 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 UBE2J1Q9Y385 318 aaPredicted RBP9.34□□□□□ -0.91
CXCL12-203ENST00000374429 PLSCR5A0PG75 271 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 CDIPTO14735 213 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 TDGF1P13385 188 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 LSM6P62312 80 aaKnown RBP9.34□□□□□ -0.91
CXCL12-203ENST00000374429 FAM3AP98173 230 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 NSUN5P2Q63ZY6 315 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 LYZL2Q7Z4W2 148 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 SGPP2Q8IWX5 399 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 BPIFCQ8NFQ6 507 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 RXFP4Q8TDU9 374 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 RFNGQ9Y644 331 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 OR14I1A6ND48 311 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 SNRPGP15A8MWD9 76 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 TRAPPC2LH3BP13 241 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 OR5AC1P0C628 307 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 NQO2P16083 231 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 RAB35Q15286 201 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 OR2A2Q6IF42 318 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 HSD17B13Q7Z5P4 300 aaPredicted RBP9.34□□□□□ -0.91
CXCL12-203ENST00000374429 RPS4Y2Q8TD47 263 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 MRPL24Q96A35 216 aaKnown RBP9.34□□□□□ -0.91
CXCL12-203ENST00000374429 C14orf144Q96I85 54 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 FER1L6-AS2Q96M78 137 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 PRO1933Q9H354 126 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 ZNF703Q9H7S9 590 aaPredicted RBP9.34□□□□□ -0.91
CXCL12-203ENST00000374429 FAM96BQ9Y3D0 163 aa9.34□□□□□ -0.91
CXCL12-203ENST00000374429 LOC102725191A0A1B0GVB3 256 aa9.33□□□□□ -0.92
CXCL12-203ENST00000374429 B4E171 279 aa9.33□□□□□ -0.92
CXCL12-203ENST00000374429 WDR1O75083 606 aa9.33□□□□□ -0.92
CXCL12-203ENST00000374429 GP1BAP07359 652 aa9.33□□□□□ -0.92
CXCL12-203ENST00000374429 SCTP09683 121 aa9.33□□□□□ -0.92
CXCL12-203ENST00000374429 FSTP19883 344 aa9.33□□□□□ -0.92
CXCL12-203ENST00000374429 CSRP1P21291 193 aaKnown RBP9.33□□□□□ -0.92
CXCL12-203ENST00000374429 CNN3Q15417 329 aaKnown RBP9.33□□□□□ -0.92
CXCL12-203ENST00000374429 SLC25A24Q6NUK1 477 aa9.33□□□□□ -0.92
CXCL12-203ENST00000374429 MDP1Q86V88 176 aa9.33□□□□□ -0.92
CXCL12-203ENST00000374429 ZNF808Q8N4W9 903 aaPredicted RBP9.33□□□□□ -0.92
CXCL12-203ENST00000374429 MRGPRFQ96AM1 343 aa9.33□□□□□ -0.92
CXCL12-203ENST00000374429 PPP1R3CQ9UQK1 317 aa9.33□□□□□ -0.92
CXCL12-203ENST00000374429 ZNF728P0DKX0 622 aa9.33□□□□□ -0.92
CXCL12-203ENST00000374429 PSMB6P28072 239 aa9.33□□□□□ -0.92
CXCL12-203ENST00000374429 BLOC1S1P78537 153 aa9.33□□□□□ -0.92
CXCL12-203ENST00000374429 ZNF383Q8NA42 475 aa9.33□□□□□ -0.92
CXCL12-203ENST00000374429 SCARB1Q8WTV0 552 aa9.33□□□□□ -0.92
CXCL12-203ENST00000374429 KCNE4Q8WWG9 221 aa9.33□□□□□ -0.92
CXCL12-203ENST00000374429 RTN4IP1Q8WWV3 396 aaPredicted RBP9.33□□□□□ -0.92
CXCL12-203ENST00000374429 PARD6AQ9NPB6 346 aa9.33□□□□□ -0.92
CXCL12-203ENST00000374429 RCL1Q9Y2P8 373 aaKnown RBP9.33□□□□□ -0.92
CXCL12-203ENST00000374429 TRAV14DV4A0A0A6YYC5 116 aa9.32□□□□□ -0.92
CXCL12-203ENST00000374429 IGHV3-43A0A0B4J1X8 118 aa9.32□□□□□ -0.92
CXCL12-203ENST00000374429 SYNGR3O43761 229 aa9.32□□□□□ -0.92
CXCL12-203ENST00000374429 C1QL1O75973 258 aa9.32□□□□□ -0.92
CXCL12-203ENST00000374429 IGHV3-43DP0DP04 118 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms