RNA–Protein interactions for RNA: ENST00000374217.6

UBXN11-204, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-204ENST00000374217 MARS2Q96GW9 593 aaKnown RBP13□□□□□ -0.33
UBXN11-204ENST00000374217 RCC1LQ96I51 464 aaKnown RBP13□□□□□ -0.33
UBXN11-204ENST00000374217 SYT3Q9BQG1 590 aa13□□□□□ -0.33
UBXN11-204ENST00000374217 NIPSNAP3BQ9BS92 247 aa13□□□□□ -0.33
UBXN11-204ENST00000374217 ZNF2Q9BSG1 426 aaPredicted RBP13□□□□□ -0.33
UBXN11-204ENST00000374217 BANF2Q9H503 90 aa13□□□□□ -0.33
UBXN11-204ENST00000374217 NAA60Q9H7X0 242 aa13□□□□□ -0.33
UBXN11-204ENST00000374217 WFDC1Q9HC57 220 aa13□□□□□ -0.33
UBXN11-204ENST00000374217 MAP1BP46821 2468 aaKnown RBP13□□□□□ -0.33
UBXN11-204ENST00000374217 A0A1W2PNV4 684 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 FAM230AA0A1W2PPH8 454 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 C2orf72A6NCS6 295 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 HSD17B6O14756 317 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 HBE1P02100 147 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 HPNP05981 417 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 SRP19P09132 144 aaKnown RBP12.99□□□□□ -0.33
UBXN11-204ENST00000374217 SFTPDP35247 375 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 CCL11P51671 97 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 SRPXP78539 464 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 HSF1Q00613 529 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 TMEM187Q14656 261 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 ZNF506Q5JVG8 444 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 FAM213BQ8TBF2 198 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 C10orf35Q96D05 121 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 KLHDC3Q9BQ90 382 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 RTN4RQ9BZR6 473 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 CHST11Q9NPF2 352 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 CHCHD2Q9Y6H1 151 aaPredicted RBP12.99□□□□□ -0.33
UBXN11-204ENST00000374217 A0A087X0M5 115 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 A0A1B0GX30 115 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 PITX3O75364 302 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 SCGB1D2O95969 90 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 P04436 131 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 BTF3P20290 206 aaKnown RBP12.99□□□□□ -0.33
UBXN11-204ENST00000374217 BLVRBP30043 206 aaPredicted RBP12.99□□□□□ -0.33
UBXN11-204ENST00000374217 SUMO3P55854 103 aaPredicted RBP12.99□□□□□ -0.33
UBXN11-204ENST00000374217 SOX8P57073 446 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 FMODQ06828 376 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 GNMTQ14749 295 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 ZNF468Q5VIY5 522 aaPredicted RBP12.99□□□□□ -0.33
UBXN11-204ENST00000374217 PRAMEF20Q5VT98 475 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 SP5Q6BEB4 398 aaPredicted RBP12.99□□□□□ -0.33
UBXN11-204ENST00000374217 ABHD12BQ7Z5M8 362 aaPredicted RBP12.99□□□□□ -0.33
UBXN11-204ENST00000374217 RTN4RL2Q86UN3 420 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 C1orf87Q8N0U7 546 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 LGI3Q8N145 548 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 BEND2Q8NDZ0 799 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 OR10S1Q8NGN2 331 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 OR2AJ1Q8NGZ0 328 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 RNASEH2CQ8TDP1 164 aaKnown RBP12.99□□□□□ -0.33
UBXN11-204ENST00000374217 GNPNAT1Q96EK6 184 aaPredicted RBP12.99□□□□□ -0.33
UBXN11-204ENST00000374217 C18orf12Q96KH6 178 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 SSX3Q99909 188 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 PIGQQ9BRB3 760 aa12.99□□□□□ -0.33
UBXN11-204ENST00000374217 PARP12Q9H0J9 701 aaKnown RBP12.99□□□□□ -0.33
UBXN11-204ENST00000374217 EXPH5Q8NEV8 1989 aa12.98□□□□□ -0.33
UBXN11-204ENST00000374217 A0A1B0GV90 55 aa12.98□□□□□ -0.33
UBXN11-204ENST00000374217 DVL1O14640 695 aa12.98□□□□□ -0.33
UBXN11-204ENST00000374217 RD3LP0DJH9 198 aa12.98□□□□□ -0.33
UBXN11-204ENST00000374217 ZNF43P17038 809 aa12.98□□□□□ -0.33
UBXN11-204ENST00000374217 SERPINA2P20848 420 aa12.98□□□□□ -0.33
UBXN11-204ENST00000374217 DTYMKP23919 212 aa12.98□□□□□ -0.33
UBXN11-204ENST00000374217 PPP1CCP36873 323 aaKnown RBP12.98□□□□□ -0.33
UBXN11-204ENST00000374217 RND2P52198 227 aa12.98□□□□□ -0.33
UBXN11-204ENST00000374217 GRB2P62993 217 aaKnown RBP12.98□□□□□ -0.33
UBXN11-204ENST00000374217 DLK1P80370 383 aa12.98□□□□□ -0.33
UBXN11-204ENST00000374217 KHDC3LQ587J8 217 aa12.98□□□□□ -0.33
UBXN11-204ENST00000374217 LIAT1Q6ZQX7 453 aa12.98□□□□□ -0.33
UBXN11-204ENST00000374217 ZNF429Q86V71 674 aa12.98□□□□□ -0.33
UBXN11-204ENST00000374217 OR14L1PQ8NHC6 308 aa12.98□□□□□ -0.33
UBXN11-204ENST00000374217 ANGPTL4Q9BY76 406 aa12.98□□□□□ -0.33
UBXN11-204ENST00000374217 NECAP2Q9NVZ3 263 aa12.98□□□□□ -0.33
UBXN11-204ENST00000374217 LRFN1Q9P244 771 aa12.98□□□□□ -0.33
UBXN11-204ENST00000374217 DKK4Q9UBT3 224 aa12.98□□□□□ -0.33
UBXN11-204ENST00000374217 ANXA10Q9UJ72 324 aa12.98□□□□□ -0.33
UBXN11-204ENST00000374217 PITPNC1Q9UKF7 332 aa12.98□□□□□ -0.33
UBXN11-204ENST00000374217 DOCK10Q96BY6 2186 aa12.98□□□□□ -0.33
UBXN11-204ENST00000374217 CDS2O95674 445 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 CCL3P10147 92 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 HLA-DOBP13765 273 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 FGF7P21781 194 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 FHITP49789 147 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 UCP3P55916 312 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 KCNMB1Q16558 191 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 TMEM176BQ3YBM2 270 aaPredicted RBP12.97□□□□□ -0.33
UBXN11-204ENST00000374217 ABCA11PQ4W5N1 156 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 PLXDC2Q6UX71 529 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 FBXW12Q6X9E4 464 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 TMEM182Q6ZP80 229 aaPredicted RBP12.97□□□□□ -0.33
UBXN11-204ENST00000374217 ADPRHL1Q8NDY3 354 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 OR8B12Q8NGG6 310 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 PP6455Q8WZ26 134 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 LURAP1Q96LR2 239 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 SLC25A31Q9H0C2 315 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 GPR84Q9NQS5 396 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 DKKL1Q9UK85 242 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 HSF4Q9ULV5 492 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 MMP24Q9Y5R2 645 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 SMCO3A2RU48 225 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 ZNF726A6NNF4 738 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms