RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 NAAAQ02083 359 aa10.65□□□□□ -0.7
PRPF4-202ENST00000374199 CLLU1Q5K131 121 aa10.65□□□□□ -0.7
PRPF4-202ENST00000374199 DACT3Q96B18 629 aaPredicted RBP10.65□□□□□ -0.7
PRPF4-202ENST00000374199 C18orf12Q96KH6 178 aa10.65□□□□□ -0.7
PRPF4-202ENST00000374199 USB1Q9BQ65 265 aaKnown RBP10.65□□□□□ -0.7
PRPF4-202ENST00000374199 ADAT1Q9BUB4 502 aaKnown RBP10.65□□□□□ -0.7
PRPF4-202ENST00000374199 TMA7Q9Y2S6 64 aaKnown RBP10.65□□□□□ -0.7
PRPF4-202ENST00000374199 TRDCB7Z8K6 153 aa10.65□□□□□ -0.71
PRPF4-202ENST00000374199 CCKARP32238 428 aa10.65□□□□□ -0.71
PRPF4-202ENST00000374199 TMEM187Q14656 261 aa10.65□□□□□ -0.71
PRPF4-202ENST00000374199 MSMPQ1L6U9 139 aa10.65□□□□□ -0.71
PRPF4-202ENST00000374199 C20orf204Q6ZNR8 217 aa10.65□□□□□ -0.71
PRPF4-202ENST00000374199 TMUB2Q71RG4 321 aa10.65□□□□□ -0.71
PRPF4-202ENST00000374199 MRGPRGQ86SM5 289 aa10.65□□□□□ -0.71
PRPF4-202ENST00000374199 RNF126Q9BV68 326 aa10.65□□□□□ -0.71
PRPF4-202ENST00000374199 MED9Q9NWA0 146 aa10.65□□□□□ -0.71
PRPF4-202ENST00000374199 DMXL2Q8TDJ6 3036 aa10.65□□□□□ -0.71
PRPF4-202ENST00000374199 A0A1W2PR80 420 aa10.64□□□□□ -0.71
PRPF4-202ENST00000374199 AGFG2O95081 481 aa10.64□□□□□ -0.71
PRPF4-202ENST00000374199 CFDP00746 253 aaPredicted RBP10.64□□□□□ -0.71
PRPF4-202ENST00000374199 C4BPBP20851 252 aa10.64□□□□□ -0.71
PRPF4-202ENST00000374199 ZNF81P51508 661 aa10.64□□□□□ -0.71
PRPF4-202ENST00000374199 ARPC4P59998 168 aa10.64□□□□□ -0.71
PRPF4-202ENST00000374199 SPATA46Q5T0L3 261 aa10.64□□□□□ -0.71
PRPF4-202ENST00000374199 SLC22A25Q6T423 547 aa10.64□□□□□ -0.71
PRPF4-202ENST00000374199 DOLPP1Q86YN1 238 aa10.64□□□□□ -0.71
PRPF4-202ENST00000374199 SPERTQ8NA61 448 aa10.64□□□□□ -0.71
PRPF4-202ENST00000374199 DPCDQ9BVM2 203 aaPredicted RBP10.64□□□□□ -0.71
PRPF4-202ENST00000374199 ZFHX2Q9C0A1 2572 aaPredicted RBP10.64□□□□□ -0.71
PRPF4-202ENST00000374199 M0R233 179 aa10.64□□□□□ -0.71
PRPF4-202ENST00000374199 OR7C1O76099 320 aaPredicted RBP10.64□□□□□ -0.71
PRPF4-202ENST00000374199 OR2F2O95006 317 aa10.64□□□□□ -0.71
PRPF4-202ENST00000374199 IGHV3-13P01766 116 aa10.64□□□□□ -0.71
PRPF4-202ENST00000374199 AKR1C4P17516 323 aa10.64□□□□□ -0.71
PRPF4-202ENST00000374199 OR2F1Q13607 317 aa10.64□□□□□ -0.71
PRPF4-202ENST00000374199 FAM180AQ6UWF9 173 aa10.64□□□□□ -0.71
PRPF4-202ENST00000374199 MSI2Q96DH6 328 aaKnown RBP10.64□□□□□ -0.71
PRPF4-202ENST00000374199 ELMOD3Q96FG2 381 aa10.64□□□□□ -0.71
PRPF4-202ENST00000374199 CNTRLQ7Z7A1 2325 aa10.64□□□□□ -0.71
PRPF4-202ENST00000374199 H0YL77 283 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 IFNA2P01563 188 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 CTXN2P0C2S0 81 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 CYCSP99999 105 aaKnown RBP10.63□□□□□ -0.71
PRPF4-202ENST00000374199 EXOSC2Q13868 293 aaKnown RBP10.63□□□□□ -0.71
PRPF4-202ENST00000374199 MOB1BQ7L9L4 216 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 SSX8Q7RTT4 187 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 FAM185AQ8N0U4 392 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 BHLHE23Q8NDY6 225 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 PPP1R1CQ8WVI7 109 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 WDR13Q9H1Z4 485 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 CXXC4Q9H2H0 198 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 ELOVL5Q9NYP7 299 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 PRKACAP17612 351 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 SORDQ00796 357 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 FOXC1Q12948 553 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 BRICD5Q6PL45 260 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 C3P1Q6ZMU1 363 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 KCTD9Q7L273 389 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 OR4A4PQ8NGN8 299 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 COQ8AQ8NI60 647 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 MARVELD3Q96A59 401 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 S100PBPQ96BU1 408 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 NAA60Q9H7X0 242 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 TMEM100Q9NV29 134 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 PCDHB10Q9UN67 800 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 CUL9Q8IWT3 2517 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 A0A0D9SG52 128 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 KIR2DS1A0A191URI9 304 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 PPYP01298 95 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 KIR2DS4P43632 304 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 BAMBIQ13145 260 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 KIR2DS1Q14954 304 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 HMGN3Q15651 99 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 ESCO2Q56NI9 601 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 FAM90A1Q86YD7 464 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 NUP37Q8NFH4 326 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 CLEC4MQ9H2X3 399 aaPredicted RBP10.63□□□□□ -0.71
PRPF4-202ENST00000374199 MGAQ8IWI9 3026 aa10.63□□□□□ -0.71
PRPF4-202ENST00000374199 INTS1Q8N201 2190 aaKnown RBP10.63□□□□□ -0.71
PRPF4-202ENST00000374199 CLEC18AA5D8T8 446 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 SSTR2P30874 369 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 HOXC12P31275 282 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 SERPINF1P36955 418 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 GATA4P43694 442 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 GMFBP60983 142 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 RBM39Q14498 530 aaKnown RBP10.62□□□□□ -0.71
PRPF4-202ENST00000374199 H1FOOQ8IZA3 346 aaPredicted RBP10.62□□□□□ -0.71
PRPF4-202ENST00000374199 CLEC18CQ8NCF0 446 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 ZNF488Q96MN9 340 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 SUCNR1Q9BXA5 334 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 RASL12Q9NYN1 266 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 KIF25Q9UIL4 384 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 GTF3C1Q12789 2109 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 H0YIZ8 118 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 IGLV2-14P01704 120 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 SPINK2P20155 84 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 IL32P24001 234 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 GNRHRP30968 328 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 HTR2BP41595 481 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 CR1LQ2VPA4 569 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms