RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 ECI1P42126 302 aa13.29□□□□□ -0.28
HDAC8-209ENST00000373589 CASP6P55212 293 aa13.29□□□□□ -0.28
HDAC8-209ENST00000373589 RAP2BP61225 183 aa13.29□□□□□ -0.28
HDAC8-209ENST00000373589 RPS23P62266 143 aaKnown RBP13.29□□□□□ -0.28
HDAC8-209ENST00000373589 IL13RA1P78552 427 aa13.29□□□□□ -0.28
HDAC8-209ENST00000373589 IFITM2Q01629 132 aa13.29□□□□□ -0.28
HDAC8-209ENST00000373589 MZT1Q08AG7 82 aa13.29□□□□□ -0.28
HDAC8-209ENST00000373589 TMEM128Q5BJH2 165 aa13.29□□□□□ -0.28
HDAC8-209ENST00000373589 LAMTOR1Q6IAA8 161 aa13.29□□□□□ -0.28
HDAC8-209ENST00000373589 UXS1Q8NBZ7 420 aa13.29□□□□□ -0.28
HDAC8-209ENST00000373589 OR2T35Q8NGX2 323 aa13.29□□□□□ -0.28
HDAC8-209ENST00000373589 CHIAQ9BZP6 476 aa13.29□□□□□ -0.28
HDAC8-209ENST00000373589 RIMS4Q9H426 269 aaPredicted RBP13.29□□□□□ -0.28
HDAC8-209ENST00000373589 CHMP1AQ9HD42 196 aaPredicted RBP13.29□□□□□ -0.28
HDAC8-209ENST00000373589 PLSCR3Q9NRY6 295 aa13.29□□□□□ -0.28
HDAC8-209ENST00000373589 HSPB6O14558 160 aa13.28□□□□□ -0.28
HDAC8-209ENST00000373589 GOSR2O14653 212 aa13.28□□□□□ -0.28
HDAC8-209ENST00000373589 HS3ST1O14792 307 aa13.28□□□□□ -0.28
HDAC8-209ENST00000373589 SLC22A5O76082 557 aa13.28□□□□□ -0.28
HDAC8-209ENST00000373589 PTBP3O95758 552 aaKnown RBP13.28□□□□□ -0.28
HDAC8-209ENST00000373589 GSTT2P0CG29 244 aa13.28□□□□□ -0.28
HDAC8-209ENST00000373589 CD200P41217 278 aa13.28□□□□□ -0.28
HDAC8-209ENST00000373589 KLF3P57682 345 aaPredicted RBP13.28□□□□□ -0.28
HDAC8-209ENST00000373589 BAMBIQ13145 260 aa13.28□□□□□ -0.28
HDAC8-209ENST00000373589 RBM39Q14498 530 aaKnown RBP13.28□□□□□ -0.28
HDAC8-209ENST00000373589 SPIN3Q5JUX0 258 aa13.28□□□□□ -0.28
HDAC8-209ENST00000373589 PRAMEF6Q5VXH4 476 aa13.28□□□□□ -0.28
HDAC8-209ENST00000373589 TMEM108Q6UXF1 575 aa13.28□□□□□ -0.28
HDAC8-209ENST00000373589 WDR82Q6UXN9 313 aa13.28□□□□□ -0.28
HDAC8-209ENST00000373589 ZNF826PQ6ZT77 177 aa13.28□□□□□ -0.28
HDAC8-209ENST00000373589 NUP37Q8NFH4 326 aa13.28□□□□□ -0.28
HDAC8-209ENST00000373589 RDH5Q92781 318 aa13.28□□□□□ -0.28
HDAC8-209ENST00000373589 DHRS9Q9BPW9 319 aa13.28□□□□□ -0.28
HDAC8-209ENST00000373589 ITPR1Q14643 2758 aa13.28□□□□□ -0.28
HDAC8-209ENST00000373589 SIX6O95475 246 aa13.27□□□□□ -0.28
HDAC8-209ENST00000373589 DUS4LO95620 317 aaKnown RBP13.27□□□□□ -0.28
HDAC8-209ENST00000373589 OR2H2O95918 312 aa13.27□□□□□ -0.28
HDAC8-209ENST00000373589 ZNF44P15621 663 aa13.27□□□□□ -0.28
HDAC8-209ENST00000373589 PPP3CBP16298 524 aa13.27□□□□□ -0.28
HDAC8-209ENST00000373589 GLRA1P23415 457 aa13.27□□□□□ -0.28
HDAC8-209ENST00000373589 DNASE1P24855 282 aa13.27□□□□□ -0.28
HDAC8-209ENST00000373589 PTAFRP25105 342 aa13.27□□□□□ -0.28
HDAC8-209ENST00000373589 CD34P28906 385 aa13.27□□□□□ -0.28
HDAC8-209ENST00000373589 Q5BKY6 102 aa13.27□□□□□ -0.28
HDAC8-209ENST00000373589 LY6G6FQ5SQ64 297 aa13.27□□□□□ -0.28
HDAC8-209ENST00000373589 DCAF12L2Q5VW00 463 aa13.27□□□□□ -0.28
HDAC8-209ENST00000373589 SHEQ5VZ18 495 aa13.27□□□□□ -0.28
HDAC8-209ENST00000373589 ZNF880Q6PDB4 577 aa13.27□□□□□ -0.28
HDAC8-209ENST00000373589 MRPL30Q8TCC3 161 aaKnown RBP13.27□□□□□ -0.28
HDAC8-209ENST00000373589 NEK7Q8TDX7 302 aa13.27□□□□□ -0.28
HDAC8-209ENST00000373589 ASB13Q8WXK3 278 aa13.27□□□□□ -0.28
HDAC8-209ENST00000373589 WDR89Q96FK6 387 aaPredicted RBP13.27□□□□□ -0.28
HDAC8-209ENST00000373589 TREM2Q9NZC2 230 aa13.27□□□□□ -0.28
HDAC8-209ENST00000373589 MGAT4AQ9UM21 535 aa13.27□□□□□ -0.28
HDAC8-209ENST00000373589 FAM172BPA6NC97 362 aa13.27□□□□□ -0.29
HDAC8-209ENST00000373589 DPRXA6NFQ7 191 aa13.27□□□□□ -0.29
HDAC8-209ENST00000373589 ZSCAN5BA6NJL1 495 aa13.27□□□□□ -0.29
HDAC8-209ENST00000373589 SLC33A1O00400 549 aaPredicted RBP13.27□□□□□ -0.29
HDAC8-209ENST00000373589 HLA-GP17693 338 aa13.27□□□□□ -0.29
HDAC8-209ENST00000373589 PI3P19957 117 aa13.27□□□□□ -0.29
HDAC8-209ENST00000373589 VAMP1P23763 118 aa13.27□□□□□ -0.29
HDAC8-209ENST00000373589 VHLLQ6RSH7 139 aa13.27□□□□□ -0.29
HDAC8-209ENST00000373589 WFDC8Q8IUA0 241 aa13.27□□□□□ -0.29
HDAC8-209ENST00000373589 C9orf62Q8N4C0 152 aa13.27□□□□□ -0.29
HDAC8-209ENST00000373589 KDF1Q8NAX2 398 aaPredicted RBP13.27□□□□□ -0.29
HDAC8-209ENST00000373589 OR2Z1Q8NG97 314 aa13.27□□□□□ -0.29
HDAC8-209ENST00000373589 PHB2Q99623 299 aa13.27□□□□□ -0.29
HDAC8-209ENST00000373589 SYT3Q9BQG1 590 aa13.27□□□□□ -0.29
HDAC8-209ENST00000373589 SLC23A1Q9UHI7 598 aa13.27□□□□□ -0.29
HDAC8-209ENST00000373589 OPN4Q9UHM6 478 aa13.27□□□□□ -0.29
HDAC8-209ENST00000373589 ADGRG4Q8IZF6 3080 aa13.27□□□□□ -0.29
HDAC8-209ENST00000373589 ATRXP46100 2492 aa13.27□□□□□ -0.29
HDAC8-209ENST00000373589 SHANK1Q9Y566 2161 aa13.26□□□□□ -0.29
HDAC8-209ENST00000373589 A6NLC8 198 aa13.26□□□□□ -0.29
HDAC8-209ENST00000373589 SH2D1BO14796 132 aa13.26□□□□□ -0.29
HDAC8-209ENST00000373589 SFT2D2O95562 160 aa13.26□□□□□ -0.29
HDAC8-209ENST00000373589 SFTPCP11686 197 aa13.26□□□□□ -0.29
HDAC8-209ENST00000373589 RPS2P15880 293 aaKnown RBP13.26□□□□□ -0.29
HDAC8-209ENST00000373589 SUPT4H1P63272 117 aaKnown RBP13.26□□□□□ -0.29
HDAC8-209ENST00000373589 C20orf204Q6ZNR8 217 aa13.26□□□□□ -0.29
HDAC8-209ENST00000373589 GAPTQ8N292 157 aa13.26□□□□□ -0.29
HDAC8-209ENST00000373589 OR5M8Q8NGP6 311 aa13.26□□□□□ -0.29
HDAC8-209ENST00000373589 TMPRSS13Q9BYE2 586 aa13.26□□□□□ -0.29
HDAC8-209ENST00000373589 MRPL37Q9BZE1 423 aaKnown RBP13.26□□□□□ -0.29
HDAC8-209ENST00000373589 ATP23Q9Y6H3 246 aa13.26□□□□□ -0.29
HDAC8-209ENST00000373589 PCNX1Q96RV3 2341 aa13.26□□□□□ -0.29
HDAC8-209ENST00000373589 KIR2DS1A0A191URI9 304 aa13.25□□□□□ -0.29
HDAC8-209ENST00000373589 DBX1A6NMT0 343 aa13.25□□□□□ -0.29
HDAC8-209ENST00000373589 POM121CA8CG34 1229 aa13.25□□□□□ -0.29
HDAC8-209ENST00000373589 TRDCB7Z8K6 153 aa13.25□□□□□ -0.29
HDAC8-209ENST00000373589 SIRPB1O00241 398 aa13.25□□□□□ -0.29
HDAC8-209ENST00000373589 WNT9BO14905 357 aa13.25□□□□□ -0.29
HDAC8-209ENST00000373589 ZNF205O95201 554 aa13.25□□□□□ -0.29
HDAC8-209ENST00000373589 CTSDP07339 412 aaPredicted RBP13.25□□□□□ -0.29
HDAC8-209ENST00000373589 PGAM2P15259 253 aa13.25□□□□□ -0.29
HDAC8-209ENST00000373589 LMO1P25800 156 aa13.25□□□□□ -0.29
HDAC8-209ENST00000373589 FCGR2CP31995 323 aa13.25□□□□□ -0.29
HDAC8-209ENST00000373589 MDH2P40926 338 aaKnown RBP13.25□□□□□ -0.29
HDAC8-209ENST00000373589 KIR2DS4P43632 304 aa13.25□□□□□ -0.29
HDAC8-209ENST00000373589 GMFBP60983 142 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms