RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 CABLES2Q9BTV7 478 aa7.73□□□□□ -1.17
ATG4A-203ENST00000372232 NMNAT2Q9BZQ4 307 aa7.73□□□□□ -1.17
ATG4A-203ENST00000372232 LYRM2Q9NU23 88 aaPredicted RBP7.73□□□□□ -1.17
ATG4A-203ENST00000372232 SLC45A2Q9UMX9 530 aa7.73□□□□□ -1.17
ATG4A-203ENST00000372232 FANCMQ8IYD8 2048 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 NPIPA5A0A0B4J1W7 369 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 A0A1B0GU03 582 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 MPIG6BO95866 241 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 ABHD16AO95870 558 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 HSPB1P04792 205 aaKnown RBP7.72□□□□□ -1.17
ATG4A-203ENST00000372232 SLC35E2P0CK97 266 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 PTNP21246 168 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 MDKP21741 143 aaPredicted RBP7.72□□□□□ -1.17
ATG4A-203ENST00000372232 RPL12P30050 165 aaKnown RBP7.72□□□□□ -1.17
ATG4A-203ENST00000372232 GABRA3P34903 492 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 PRRX1P54821 245 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 RAB38P57729 211 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 TAS2R31P59538 309 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 PNRC1Q12796 327 aaPredicted RBP7.72□□□□□ -1.17
ATG4A-203ENST00000372232 OR1Q1Q15612 314 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 EMC4Q5J8M3 183 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 TPTE2P1Q5T6R2 138 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 LRP11Q86VZ4 500 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 EXD3Q8N9H8 876 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 APCDD1LQ8NCL9 501 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 ADAD2Q8NCV1 583 aaKnown RBP7.72□□□□□ -1.17
ATG4A-203ENST00000372232 OR13C9Q8NGT0 318 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 GRHL3Q8TE85 626 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 TMEM239Q8WW34 195 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 CFHR4Q92496 578 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 KTI12Q96EK9 354 aaPredicted RBP7.72□□□□□ -1.17
ATG4A-203ENST00000372232 C2orf50Q96LR7 162 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 CDX2Q99626 313 aaPredicted RBP7.72□□□□□ -1.17
ATG4A-203ENST00000372232 P4HTMQ9NXG6 502 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 WSB2Q9NYS7 404 aaPredicted RBP7.72□□□□□ -1.17
ATG4A-203ENST00000372232 OR6C3Q9NZP0 311 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 LRP4O75096 1905 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 CHD3Q12873 2000 aaKnown RBP7.72□□□□□ -1.17
ATG4A-203ENST00000372232 PROB1E7EW31 1015 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 LYPD3O95274 346 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 ZNF28P17035 718 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 FCGR2CP31995 323 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 APOBEC1P41238 236 aaKnown RBP7.72□□□□□ -1.17
ATG4A-203ENST00000372232 RAC3P60763 192 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 EIF2B1Q14232 305 aaKnown RBP7.72□□□□□ -1.17
ATG4A-203ENST00000372232 DEFB110Q30KQ9 67 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 TOMM20LQ6UXN7 152 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 ZNF66Q6ZN08 573 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 DGAT2L6Q6ZPD8 337 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 OR52R1Q8NGF1 315 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 PINX1Q96BK5 328 aaKnown RBP7.72□□□□□ -1.17
ATG4A-203ENST00000372232 MS4A10Q96PG2 267 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 CTDSP1Q9GZU7 261 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 HSF4Q9ULV5 492 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 LAMTOR2Q9Y2Q5 125 aa7.72□□□□□ -1.17
ATG4A-203ENST00000372232 VSTM2BA6NLU5 285 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 B4DGG1 531 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 K7N7A8 449 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 IFNL4K9M1U5 179 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 F2RL2O00254 374 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 DNPH1O43598 174 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 STK17BO94768 372 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 NKX2-2O95096 273 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 BLKP51451 505 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 RND3P61587 244 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 ADAM8P78325 824 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 RBPJQ06330 500 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 ACOT6Q3I5F7 207 aaPredicted RBP7.71□□□□□ -1.18
ATG4A-203ENST00000372232 SLC22A6Q4U2R8 563 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 HLA-DQA1Q5Y7H0 255 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 MDGA2Q7Z553 956 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 ZAR1Q86SH2 424 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 ZNF679Q8IYX0 411 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 CYB561D1Q8N8Q1 229 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 OR2T27Q8NH04 317 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 OR4S2Q8NH73 311 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 PFN4Q8NHR9 129 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 NEIL1Q96FI4 390 aaPredicted RBP7.71□□□□□ -1.18
ATG4A-203ENST00000372232 LOXL4Q96JB6 756 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 VAMP8Q9BV40 100 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 LRRC61Q9BV99 259 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 OR52D1Q9H346 318 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 PLK3Q9H4B4 646 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 C20orf141Q9NUB4 165 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 SIDT1Q9NXL6 827 aaKnown RBP7.71□□□□□ -1.18
ATG4A-203ENST00000372232 ZNF581Q9P0T4 197 aa7.71□□□□□ -1.18
ATG4A-203ENST00000372232 RNF212BA8MTL3 300 aa7.7□□□□□ -1.18
ATG4A-203ENST00000372232 PRH1P02810 166 aa7.7□□□□□ -1.18
ATG4A-203ENST00000372232 SCGB1A1P11684 91 aa7.7□□□□□ -1.18
ATG4A-203ENST00000372232 FAHP16930 419 aa7.7□□□□□ -1.18
ATG4A-203ENST00000372232 FUT1P19526 365 aa7.7□□□□□ -1.18
ATG4A-203ENST00000372232 LGALS7P47929 136 aa7.7□□□□□ -1.18
ATG4A-203ENST00000372232 FXYD6P3P58550 94 aa7.7□□□□□ -1.18
ATG4A-203ENST00000372232 ICAM4Q14773 271 aa7.7□□□□□ -1.18
ATG4A-203ENST00000372232 PRTGQ2VWP7 1150 aa7.7□□□□□ -1.18
ATG4A-203ENST00000372232 ZNF506Q5JVG8 444 aa7.7□□□□□ -1.18
ATG4A-203ENST00000372232 PRR27Q6MZM9 219 aa7.7□□□□□ -1.18
ATG4A-203ENST00000372232 UNQ5815/PRO19632Q6UWF5 114 aa7.7□□□□□ -1.18
ATG4A-203ENST00000372232 FAM90A1Q86YD7 464 aa7.7□□□□□ -1.18
ATG4A-203ENST00000372232 METTL27Q8N6F8 245 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms