RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 ALG1L2C9J202 215 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 PPIHO43447 177 aaKnown RBP11.1□□□□□ -0.63
HCFC1-202ENST00000369984 MELTFP08582 738 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 PRRX1P54821 245 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 HFEQ30201 348 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 A0A1B0GV72 72 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 CA2P00918 260 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 TRAT1Q6PIZ9 186 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 SPICQ8N5J4 248 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 ZNF83P51522 516 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 IL13RA2Q14627 380 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 ZNF519Q8TB69 540 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 NT5CQ8TCD5 201 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 SPPL3Q8TCT6 385 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 MS4A4AQ96JQ5 239 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 TBX15Q96SF7 602 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 TMEM191AQ9H0A3 160 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 SHISA8B8ZZ34 492 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 SFT2D2O95562 160 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 GP1BAP07359 652 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 INHBBP09529 407 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 SUMO3P55854 103 aaPredicted RBP11.1□□□□□ -0.63
HCFC1-202ENST00000369984 C19orf57Q0VDD7 668 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 WDR38Q5JTN6 314 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 FBXL6Q8N531 539 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 OR1L6Q8NGR2 347 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 MYOZ3Q8TDC0 251 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 ZNF738Q8NE65 137 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 ZNF426Q9BUY5 554 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 SLC7A10Q9NS82 523 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 NAT8Q9UHE5 227 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 GFERP55789 205 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 NHLRC1Q6VVB1 395 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 SGK494Q96LW2 274 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 CLEC1BQ9P126 229 aa11.1□□□□□ -0.63
HCFC1-202ENST00000369984 ABCA3Q99758 1704 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 ZNF815PA8K554 130 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 MFNGO00587 321 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 GALP22466 123 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 SLC6A1P30531 599 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 ANK1P16157 1881 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 SYNGR2O43760 224 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 HMGA1P17096 107 aaKnown RBP11.09□□□□□ -0.63
HCFC1-202ENST00000369984 SLC25A1P53007 311 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 D2HGDHQ8N465 521 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 FOXB1Q99853 325 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 TEX101Q9BY14 249 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 EPPINO95925 133 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 FABP2P12104 132 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 GPR3P46089 330 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 MRM1Q6IN84 353 aaKnown RBP11.09□□□□□ -0.63
HCFC1-202ENST00000369984 OR2T10Q8NGZ9 312 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 IL20Q9NYY1 176 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 FBXL17Q9UF56 701 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 DHHO43323 396 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 PPP1CCP36873 323 aaKnown RBP11.09□□□□□ -0.63
HCFC1-202ENST00000369984 RAB9AP51151 201 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 ZNF788Q6ZQV5 615 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 OR2C3Q8N628 320 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 PPIL1Q9Y3C6 166 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 CCR5P51681 352 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 RNF165Q6ZSG1 346 aa11.09□□□□□ -0.63
HCFC1-202ENST00000369984 ELOA3CA0A087WX78 387 aaPredicted RBP11.08□□□□□ -0.63
HCFC1-202ENST00000369984 TRGV5A0A0B4J1U4 118 aa11.08□□□□□ -0.63
HCFC1-202ENST00000369984 C11orf94C9JXX5 98 aa11.08□□□□□ -0.63
HCFC1-202ENST00000369984 OR5AU1Q8NGC0 362 aa11.08□□□□□ -0.63
HCFC1-202ENST00000369984 MTFP1Q9UDX5 166 aa11.08□□□□□ -0.63
HCFC1-202ENST00000369984 MMP17Q9ULZ9 603 aa11.08□□□□□ -0.63
HCFC1-202ENST00000369984 MTCH2Q9Y6C9 303 aa11.08□□□□□ -0.63
HCFC1-202ENST00000369984 USP54Q70EL1 1684 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 OR2W5A6NFC9 320 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 RER1O15258 196 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 HPXP02790 462 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 PNRC1Q12796 327 aaPredicted RBP11.08□□□□□ -0.64
HCFC1-202ENST00000369984 TBC1D26Q86UD7 250 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 C10orf126Q8N4M7 172 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 Q9N2K0 584 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 ALS2Q96Q42 1657 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 HMSDA8MTL9 139 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 HTN1P15515 57 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 OR10J1P30954 320 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 Q7L0L9 218 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 ZMIZ1Q9ULJ6 1067 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 MKRN2OSH3BPM6 223 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 CCL7P80098 99 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 EID2BQ96D98 161 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 LIPGQ9Y5X9 500 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 H3BMH7 237 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 FOXC2Q99958 501 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 LINC01387J3KSC0 135 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 ARG1P05089 322 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 C19orf54Q5BKX5 351 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 LINC00615Q96LM1 132 aaPredicted RBP11.08□□□□□ -0.64
HCFC1-202ENST00000369984 K7EQS6 105 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 CCL17Q92583 94 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 OR2A5Q96R48 311 aa11.08□□□□□ -0.64
HCFC1-202ENST00000369984 LOC389332A0A1B0GUA5 103 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 LANCL1O43813 399 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 ZFPL1O95159 310 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 TSPAN12O95859 305 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms