RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 MUL1Q969V5 352 aa18.34■□□□□ 0.53
ECHDC1-203ENST00000368291 DUX5Q96PT3 197 aa18.34■□□□□ 0.53
ECHDC1-203ENST00000368291 PPA2Q9H2U2 334 aa18.34■□□□□ 0.53
ECHDC1-203ENST00000368291 A0A1W2PPH5 198 aa18.33■□□□□ 0.53
ECHDC1-203ENST00000368291 DEGS1O15121 323 aa18.33■□□□□ 0.53
ECHDC1-203ENST00000368291 MRPS14O60783 128 aaKnown RBP18.33■□□□□ 0.53
ECHDC1-203ENST00000368291 CSN2P05814 226 aa18.33■□□□□ 0.53
ECHDC1-203ENST00000368291 UCHL1P09936 223 aa18.33■□□□□ 0.53
ECHDC1-203ENST00000368291 UBA52P62987 128 aaKnown RBP18.33■□□□□ 0.53
ECHDC1-203ENST00000368291 GUCA2AQ02747 115 aa18.33■□□□□ 0.53
ECHDC1-203ENST00000368291 NHLRC3Q5JS37 347 aa18.33■□□□□ 0.53
ECHDC1-203ENST00000368291 NCR3LG1Q68D85 454 aa18.33■□□□□ 0.53
ECHDC1-203ENST00000368291 RBMS3Q6XE24 437 aaKnown RBP18.33■□□□□ 0.53
ECHDC1-203ENST00000368291 ZNF367Q7RTV3 350 aa18.33■□□□□ 0.53
ECHDC1-203ENST00000368291 PPP1R35Q8TAP8 253 aa18.33■□□□□ 0.53
ECHDC1-203ENST00000368291 COQ2Q96H96 371 aa18.33■□□□□ 0.53
ECHDC1-203ENST00000368291 YTHDF1Q9BYJ9 559 aaKnown RBP18.33■□□□□ 0.53
ECHDC1-203ENST00000368291 TRAV24A0A0B4J272 114 aa18.32■□□□□ 0.52
ECHDC1-203ENST00000368291 A0A0U1RQK1 487 aa18.32■□□□□ 0.52
ECHDC1-203ENST00000368291 A0A1W2PRD5 423 aa18.32■□□□□ 0.52
ECHDC1-203ENST00000368291 A0A1W2PRF3 423 aa18.32■□□□□ 0.52
ECHDC1-203ENST00000368291 A0A1W2PRM7 423 aa18.32■□□□□ 0.52
ECHDC1-203ENST00000368291 SERPINA2P20848 420 aa18.32■□□□□ 0.52
ECHDC1-203ENST00000368291 UBE2E1P51965 193 aa18.32■□□□□ 0.52
ECHDC1-203ENST00000368291 P2RX3P56373 397 aa18.32■□□□□ 0.52
ECHDC1-203ENST00000368291 AESQ08117 197 aa18.32■□□□□ 0.52
ECHDC1-203ENST00000368291 BAMBIQ13145 260 aa18.32■□□□□ 0.52
ECHDC1-203ENST00000368291 SSX1Q16384 188 aa18.32■□□□□ 0.52
ECHDC1-203ENST00000368291 SLC22A6Q4U2R8 563 aa18.32■□□□□ 0.52
ECHDC1-203ENST00000368291 OSR2Q8N2R0 312 aa18.32■□□□□ 0.52
ECHDC1-203ENST00000368291 NKAIN3Q8N8D7 197 aa18.32■□□□□ 0.52
ECHDC1-203ENST00000368291 ST3GAL6Q9Y274 331 aa18.32■□□□□ 0.52
ECHDC1-203ENST00000368291 MRPS28Q9Y2Q9 187 aaKnown RBP18.32■□□□□ 0.52
ECHDC1-203ENST00000368291 LINC00312Q9Y6C7 94 aa18.32■□□□□ 0.52
ECHDC1-203ENST00000368291 TRIM77I1YAP6 450 aa18.31■□□□□ 0.52
ECHDC1-203ENST00000368291 NPFFO15130 113 aa18.31■□□□□ 0.52
ECHDC1-203ENST00000368291 CSTBP04080 98 aaKnown RBP18.31■□□□□ 0.52
ECHDC1-203ENST00000368291 ZNF728P0DKX0 622 aa18.31■□□□□ 0.52
ECHDC1-203ENST00000368291 SRMP19623 302 aa18.31■□□□□ 0.52
ECHDC1-203ENST00000368291 GLIPR1P48060 266 aa18.31■□□□□ 0.52
ECHDC1-203ENST00000368291 RBM11P57052 281 aaKnown RBP18.31■□□□□ 0.52
ECHDC1-203ENST00000368291 SLC9A3R2Q15599 337 aa18.31■□□□□ 0.52
ECHDC1-203ENST00000368291 TRAM1Q15629 374 aa18.31■□□□□ 0.52
ECHDC1-203ENST00000368291 Q6YL49 198 aa18.31■□□□□ 0.52
ECHDC1-203ENST00000368291 SPARTQ8N0X7 666 aa18.31■□□□□ 0.52
ECHDC1-203ENST00000368291 FAM216AQ8WUB2 273 aa18.31■□□□□ 0.52
ECHDC1-203ENST00000368291 PHYHIPQ92561 330 aa18.31■□□□□ 0.52
ECHDC1-203ENST00000368291 S100A13Q99584 98 aa18.31■□□□□ 0.52
ECHDC1-203ENST00000368291 TCF7L1Q9HCS4 588 aa18.31■□□□□ 0.52
ECHDC1-203ENST00000368291 hADV38S2A0JD32 116 aa18.3■□□□□ 0.52
ECHDC1-203ENST00000368291 MEGF11A6BM72 1044 aa18.3■□□□□ 0.52
ECHDC1-203ENST00000368291 CD37P11049 281 aa18.3■□□□□ 0.52
ECHDC1-203ENST00000368291 FABP5Q01469 135 aa18.3■□□□□ 0.52
ECHDC1-203ENST00000368291 HSD17B12Q53GQ0 312 aa18.3■□□□□ 0.52
ECHDC1-203ENST00000368291 GLIPR1L1Q6UWM5 242 aa18.3■□□□□ 0.52
ECHDC1-203ENST00000368291 ZNF714Q96N38 554 aa18.3■□□□□ 0.52
ECHDC1-203ENST00000368291 UQCC2Q9BRT2 126 aa18.3■□□□□ 0.52
ECHDC1-203ENST00000368291 IFT22Q9H7X7 185 aa18.3■□□□□ 0.52
ECHDC1-203ENST00000368291 LRRC42Q9Y546 428 aa18.3■□□□□ 0.52
ECHDC1-203ENST00000368291 HSPB6O14558 160 aa18.3■□□□□ 0.52
ECHDC1-203ENST00000368291 GEMIN2O14893 280 aaKnown RBP18.3■□□□□ 0.52
ECHDC1-203ENST00000368291 HOXA3O43365 443 aaPredicted RBP18.3■□□□□ 0.52
ECHDC1-203ENST00000368291 ZNF780AO75290 641 aaPredicted RBP18.3■□□□□ 0.52
ECHDC1-203ENST00000368291 RBP4P02753 201 aa18.3■□□□□ 0.52
ECHDC1-203ENST00000368291 PSMA1P25786 263 aaKnown RBP18.3■□□□□ 0.52
ECHDC1-203ENST00000368291 SAA4P35542 130 aa18.3■□□□□ 0.52
ECHDC1-203ENST00000368291 ATXN7L3Q14CW9 347 aaPredicted RBP18.3■□□□□ 0.52
ECHDC1-203ENST00000368291 AWAT2Q6E213 333 aa18.3■□□□□ 0.52
ECHDC1-203ENST00000368291 ZNF782Q6ZMW2 699 aaPredicted RBP18.3■□□□□ 0.52
ECHDC1-203ENST00000368291 SPATA3Q8NHX4 192 aa18.3■□□□□ 0.52
ECHDC1-203ENST00000368291 AJUBAQ96IF1 538 aa18.3■□□□□ 0.52
ECHDC1-203ENST00000368291 DNHD1Q96M86 4753 aa18.29■□□□□ 0.52
ECHDC1-203ENST00000368291 hCG_1809904A0A1W2PP81 198 aa18.29■□□□□ 0.52
ECHDC1-203ENST00000368291 A0A1W2PPE2 198 aa18.29■□□□□ 0.52
ECHDC1-203ENST00000368291 A0A1W2PR64 198 aa18.29■□□□□ 0.52
ECHDC1-203ENST00000368291 A0A1W2PRV1 198 aa18.29■□□□□ 0.52
ECHDC1-203ENST00000368291 CLDN34H7C241 214 aa18.29■□□□□ 0.52
ECHDC1-203ENST00000368291 MELTFP08582 738 aa18.29■□□□□ 0.52
ECHDC1-203ENST00000368291 GABRA5P31644 462 aa18.29■□□□□ 0.52
ECHDC1-203ENST00000368291 GPR176Q14439 515 aa18.29■□□□□ 0.52
ECHDC1-203ENST00000368291 PAN3Q58A45 887 aaKnown RBP18.29■□□□□ 0.52
ECHDC1-203ENST00000368291 KRBOX4Q5JUW0 171 aa18.29■□□□□ 0.52
ECHDC1-203ENST00000368291 C1orf100Q5SVJ3 147 aa18.29■□□□□ 0.52
ECHDC1-203ENST00000368291 UBE2UQ5VVX9 321 aa18.29■□□□□ 0.52
ECHDC1-203ENST00000368291 SVOPQ8N4V2 548 aa18.29■□□□□ 0.52
ECHDC1-203ENST00000368291 CORO2AQ92828 525 aa18.29■□□□□ 0.52
ECHDC1-203ENST00000368291 ZDHHC16Q969W1 377 aa18.29■□□□□ 0.52
ECHDC1-203ENST00000368291 GFI1Q99684 422 aa18.29■□□□□ 0.52
ECHDC1-203ENST00000368291 UBE2J1Q9Y385 318 aaPredicted RBP18.29■□□□□ 0.52
ECHDC1-203ENST00000368291 IGHV1-8P0DP01 117 aa18.28■□□□□ 0.52
ECHDC1-203ENST00000368291 GTF2F2P13984 249 aa18.28■□□□□ 0.52
ECHDC1-203ENST00000368291 LDLRAD3Q86YD5 345 aa18.28■□□□□ 0.52
ECHDC1-203ENST00000368291 TMEM104Q8NE00 496 aa18.28■□□□□ 0.52
ECHDC1-203ENST00000368291 PLPPR1Q8TBJ4 325 aa18.28■□□□□ 0.52
ECHDC1-203ENST00000368291 C17orf50Q8WW18 174 aa18.28■□□□□ 0.52
ECHDC1-203ENST00000368291 HEXA-AS1Q9H8Q6 139 aa18.28■□□□□ 0.52
ECHDC1-203ENST00000368291 PCDHB16Q9NRJ7 776 aa18.28■□□□□ 0.52
ECHDC1-203ENST00000368291 ING3Q9NXR8 418 aa18.28■□□□□ 0.52
ECHDC1-203ENST00000368291 ODAMA1E959 279 aa18.27■□□□□ 0.51
ECHDC1-203ENST00000368291 MEIOCA2RUB1 952 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms