RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 HIKESHIQ53FT3 197 aa11.75□□□□□ -0.53
PRKN-205ENST00000366897 OR4D5Q8NGN0 318 aa11.75□□□□□ -0.53
PRKN-205ENST00000366897 OR14L1PQ8NHC6 308 aa11.75□□□□□ -0.53
PRKN-205ENST00000366897 NABP1Q96AH0 204 aa11.75□□□□□ -0.53
PRKN-205ENST00000366897 SUCNR1Q9BXA5 334 aa11.75□□□□□ -0.53
PRKN-205ENST00000366897 ZNF442Q9H7R0 627 aa11.75□□□□□ -0.53
PRKN-205ENST00000366897 TREM2Q9NZC2 230 aa11.75□□□□□ -0.53
PRKN-205ENST00000366897 COL5A1P20908 1838 aaPredicted RBP11.75□□□□□ -0.53
PRKN-205ENST00000366897 A0A1B0GV90 55 aa11.75□□□□□ -0.53
PRKN-205ENST00000366897 PROB1E7EW31 1015 aa11.75□□□□□ -0.53
PRKN-205ENST00000366897 C3orf80F5H4A9 247 aa11.75□□□□□ -0.53
PRKN-205ENST00000366897 GDF9O60383 454 aa11.75□□□□□ -0.53
PRKN-205ENST00000366897 OR7C1O76099 320 aaPredicted RBP11.75□□□□□ -0.53
PRKN-205ENST00000366897 NKX2-1P43699 371 aaPredicted RBP11.75□□□□□ -0.53
PRKN-205ENST00000366897 NUBP1P53384 320 aa11.75□□□□□ -0.53
PRKN-205ENST00000366897 ZNF154Q13106 437 aa11.75□□□□□ -0.53
PRKN-205ENST00000366897 KCNMB1Q16558 191 aa11.75□□□□□ -0.53
PRKN-205ENST00000366897 IZUMO4Q1ZYL8 232 aa11.75□□□□□ -0.53
PRKN-205ENST00000366897 KHDC3LQ587J8 217 aa11.75□□□□□ -0.53
PRKN-205ENST00000366897 KDF1Q8NAX2 398 aaPredicted RBP11.75□□□□□ -0.53
PRKN-205ENST00000366897 CCDC54Q8NEL0 328 aa11.75□□□□□ -0.53
PRKN-205ENST00000366897 MEGF10Q96KG7 1140 aa11.75□□□□□ -0.53
PRKN-205ENST00000366897 UBE2J1Q9Y385 318 aaPredicted RBP11.75□□□□□ -0.53
PRKN-205ENST00000366897 WSB1Q9Y6I7 421 aa11.75□□□□□ -0.53
PRKN-205ENST00000366897 YKT6O15498 198 aa11.74□□□□□ -0.53
PRKN-205ENST00000366897 ADAM20O43506 726 aa11.74□□□□□ -0.53
PRKN-205ENST00000366897 FABP4P15090 132 aa11.74□□□□□ -0.53
PRKN-205ENST00000366897 HNRNPKP61978 463 aaKnown RBP eCLIP11.74□□□□□ -0.53
PRKN-205ENST00000366897 NHLH1Q02575 133 aa11.74□□□□□ -0.53
PRKN-205ENST00000366897 ICAM4Q14773 271 aa11.74□□□□□ -0.53
PRKN-205ENST00000366897 ARL6IP1Q15041 203 aa11.74□□□□□ -0.53
PRKN-205ENST00000366897 ZNF468Q5VIY5 522 aaPredicted RBP11.74□□□□□ -0.53
PRKN-205ENST00000366897 TMEM252Q8N6L7 170 aa11.74□□□□□ -0.53
PRKN-205ENST00000366897 CLDN23Q96B33 292 aa11.74□□□□□ -0.53
PRKN-205ENST00000366897 BORCS8Q96FH0 119 aa11.74□□□□□ -0.53
PRKN-205ENST00000366897 ARHGAP21Q5T5U3 1957 aa11.74□□□□□ -0.53
PRKN-205ENST00000366897 DHHO43323 396 aa11.74□□□□□ -0.53
PRKN-205ENST00000366897 GATCO43716 136 aaKnown RBP11.74□□□□□ -0.53
PRKN-205ENST00000366897 CD63P08962 238 aa11.74□□□□□ -0.53
PRKN-205ENST00000366897 HNF4GQ14541 408 aa11.74□□□□□ -0.53
PRKN-205ENST00000366897 RAET1LQ5VY80 246 aa11.74□□□□□ -0.53
PRKN-205ENST00000366897 C1QL4Q86Z23 238 aa11.74□□□□□ -0.53
PRKN-205ENST00000366897 C1orf210Q8IVY1 113 aa11.74□□□□□ -0.53
PRKN-205ENST00000366897 OR6C1Q96RD1 312 aa11.74□□□□□ -0.53
PRKN-205ENST00000366897 ULBP2Q9BZM5 246 aa11.74□□□□□ -0.53
PRKN-205ENST00000366897 CHRNA10Q9GZZ6 450 aa11.74□□□□□ -0.53
PRKN-205ENST00000366897 PRDM13Q9H4Q3 707 aa11.74□□□□□ -0.53
PRKN-205ENST00000366897 C3orf85A0A1B0GTC6 90 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 NPIPA2E9PIF3 369 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 NPIPA3F8WFD2 350 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 SCAF4O95104 1147 aaKnown RBP11.73□□□□□ -0.53
PRKN-205ENST00000366897 IGLV3-19P01714 112 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 HLA-HP01893 362 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 CD27P26842 260 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 SHBQ15464 509 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 OR2T2Q6IF00 324 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 MYPOPQ86VE0 399 aaPredicted RBP11.73□□□□□ -0.53
PRKN-205ENST00000366897 ODF3L1Q8IXM7 274 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 LFNGQ8NES3 379 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 RASL10BQ96S79 203 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 FAM86C1Q9NVL1 165 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 ESPL1Q14674 2120 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 ZFHX2Q9C0A1 2572 aaPredicted RBP11.73□□□□□ -0.53
PRKN-205ENST00000366897 MPPED1O15442 326 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 PPYP01298 95 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 NPBWR2P48146 333 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 LSM6P62312 80 aaKnown RBP11.73□□□□□ -0.53
PRKN-205ENST00000366897 RPL23AP62750 156 aaKnown RBP11.73□□□□□ -0.53
PRKN-205ENST00000366897 ZNF695Q8IW36 515 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 FRZBQ92765 325 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 MOB3AQ96BX8 217 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 SSX3Q99909 188 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 SYT3Q9BQG1 590 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 TGIF2Q9GZN2 237 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 SMOC1Q9H4F8 434 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 CALHM2Q9HA72 323 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 ZNF286AQ9HBT8 521 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 SLC7A10Q9NS82 523 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 PIEZO1Q92508 2521 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 DOCK7Q96N67 2140 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 ETV2O00321 342 aaPredicted RBP11.73□□□□□ -0.53
PRKN-205ENST00000366897 PIAS2O75928 621 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 CTSSP25774 331 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 RBP2P50120 134 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 VAMP2P63027 116 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 SLC25A53Q5H9E4 307 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 TBC1D26Q86UD7 250 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 PIGCQ92535 297 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 GNG13Q9P2W3 67 aa11.73□□□□□ -0.53
PRKN-205ENST00000366897 ZFP92A6NM28 416 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 PPP1R2P9O14990 202 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 CA11O75493 328 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 B4GALT1P15291 398 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 GNRHRP30968 328 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 FGF8P55075 233 aaPredicted RBP11.72□□□□□ -0.53
PRKN-205ENST00000366897 RAB11AP62491 216 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 NKX6-1P78426 367 aaPredicted RBP11.72□□□□□ -0.53
PRKN-205ENST00000366897 RTL6Q6ICC9 239 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 CALHM1Q8IU99 346 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms