RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 PLXDC2Q6UX71 529 aa12.74□□□□□ -0.37
PRKN-204ENST00000366896 SUMF2Q8NBJ7 301 aa12.74□□□□□ -0.37
PRKN-204ENST00000366896 GTF3AQ92664 365 aaKnown RBP12.74□□□□□ -0.37
PRKN-204ENST00000366896 SPTSSAQ969W0 71 aa12.74□□□□□ -0.37
PRKN-204ENST00000366896 GALNT14Q96FL9 552 aa12.74□□□□□ -0.37
PRKN-204ENST00000366896 ZNF799Q96GE5 643 aa12.74□□□□□ -0.37
PRKN-204ENST00000366896 PIGQQ9BRB3 760 aa12.74□□□□□ -0.37
PRKN-204ENST00000366896 UFSP2Q9NUQ7 469 aa12.74□□□□□ -0.37
PRKN-204ENST00000366896 ZNF581Q9P0T4 197 aa12.74□□□□□ -0.37
PRKN-204ENST00000366896 ANXA10Q9UJ72 324 aa12.74□□□□□ -0.37
PRKN-204ENST00000366896 TERTO14746 1132 aaKnown RBP12.73□□□□□ -0.37
PRKN-204ENST00000366896 FOLR3P41439 243 aa12.73□□□□□ -0.37
PRKN-204ENST00000366896 FAM27BQ5VT28 67 aa12.73□□□□□ -0.37
PRKN-204ENST00000366896 ASCL4Q6XD76 172 aa12.73□□□□□ -0.37
PRKN-204ENST00000366896 LRTM2Q8N967 370 aa12.73□□□□□ -0.37
PRKN-204ENST00000366896 C14orf144Q96I85 54 aa12.73□□□□□ -0.37
PRKN-204ENST00000366896 ZNF2Q9BSG1 426 aaPredicted RBP12.73□□□□□ -0.37
PRKN-204ENST00000366896 ANGPTL4Q9BY76 406 aa12.73□□□□□ -0.37
PRKN-204ENST00000366896 PLEKHJ1Q9NW61 149 aa12.73□□□□□ -0.37
PRKN-204ENST00000366896 TMED3Q9Y3Q3 217 aa12.73□□□□□ -0.37
PRKN-204ENST00000366896 MYO7BQ6PIF6 2116 aa12.73□□□□□ -0.37
PRKN-204ENST00000366896 AHCTF1Q8WYP5 2266 aa12.73□□□□□ -0.37
PRKN-204ENST00000366896 G3V3Y1 287 aa12.73□□□□□ -0.37
PRKN-204ENST00000366896 DNPH1O43598 174 aa12.73□□□□□ -0.37
PRKN-204ENST00000366896 HIST1H1BP16401 226 aaKnown RBP12.73□□□□□ -0.37
PRKN-204ENST00000366896 PRSS12P56730 875 aa12.73□□□□□ -0.37
PRKN-204ENST00000366896 RPS18P62269 152 aaKnown RBP12.73□□□□□ -0.37
PRKN-204ENST00000366896 MRPS34P82930 218 aaKnown RBP12.73□□□□□ -0.37
PRKN-204ENST00000366896 RTP5Q14D33 572 aa12.73□□□□□ -0.37
PRKN-204ENST00000366896 SNAI3Q3KNW1 292 aa12.73□□□□□ -0.37
PRKN-204ENST00000366896 SGK3Q96BR1 496 aa12.73□□□□□ -0.37
PRKN-204ENST00000366896 TCFL5Q9UL49 500 aa12.73□□□□□ -0.37
PRKN-204ENST00000366896 MMP24Q9Y5R2 645 aa12.73□□□□□ -0.37
PRKN-204ENST00000366896 K7N7A8 449 aa12.72□□□□□ -0.37
PRKN-204ENST00000366896 CRYGSP22914 178 aa12.72□□□□□ -0.37
PRKN-204ENST00000366896 DSCR4P56555 118 aaPredicted RBP12.72□□□□□ -0.37
PRKN-204ENST00000366896 PCOLCEQ15113 449 aa12.72□□□□□ -0.37
PRKN-204ENST00000366896 HIKESHIQ53FT3 197 aa12.72□□□□□ -0.37
PRKN-204ENST00000366896 ZNF610Q8N9Z0 462 aa12.72□□□□□ -0.37
PRKN-204ENST00000366896 SNIP1Q8TAD8 396 aaKnown RBP12.72□□□□□ -0.37
PRKN-204ENST00000366896 ZNF837Q96EG3 531 aaPredicted RBP12.72□□□□□ -0.37
PRKN-204ENST00000366896 RARRES2Q99969 163 aa12.72□□□□□ -0.37
PRKN-204ENST00000366896 METTL9Q9H1A3 318 aa12.72□□□□□ -0.37
PRKN-204ENST00000366896 BCO1Q9HAY6 547 aa12.72□□□□□ -0.37
PRKN-204ENST00000366896 GFOD1Q9NXC2 390 aa12.72□□□□□ -0.37
PRKN-204ENST00000366896 SEC14L6B5MCN3 397 aa12.72□□□□□ -0.37
PRKN-204ENST00000366896 C21orf140B9A014 251 aa12.72□□□□□ -0.37
PRKN-204ENST00000366896 ST8SIA5O15466 376 aa12.72□□□□□ -0.37
PRKN-204ENST00000366896 ZNF205O95201 554 aa12.72□□□□□ -0.37
PRKN-204ENST00000366896 FOXC1Q12948 553 aa12.72□□□□□ -0.37
PRKN-204ENST00000366896 Q3ZCU0 254 aa12.72□□□□□ -0.37
PRKN-204ENST00000366896 RBM24Q9BX46 236 aaKnown RBP12.72□□□□□ -0.37
PRKN-204ENST00000366896 GPR87Q9BY21 358 aa12.72□□□□□ -0.37
PRKN-204ENST00000366896 LIME1Q9H400 295 aa12.72□□□□□ -0.37
PRKN-204ENST00000366896 GPR173Q9NS66 373 aa12.72□□□□□ -0.37
PRKN-204ENST00000366896 ZDHHC8Q9ULC8 765 aa12.72□□□□□ -0.37
PRKN-204ENST00000366896 HS3ST3B1Q9Y662 390 aa12.72□□□□□ -0.37
PRKN-204ENST00000366896 A0A087WWC5 75 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 NPIPA2E9PIF3 369 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 NPIPA3F8WFD2 350 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 RPL36A-HNRNPH2H7BZ11 118 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 H7C1Q1 480 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 ANGPTL7O43827 346 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 RBP2P50120 134 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 ELOBQ15370 118 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 DNLZQ5SXM8 178 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 C20orf196Q8IYI0 205 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 HSD17B11Q8NBQ5 300 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 OR2AE1Q8NHA4 323 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 FAM213BQ8TBF2 198 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 POM121Q96HA1 1249 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 SF3B5Q9BWJ5 86 aaKnown RBP12.71□□□□□ -0.37
PRKN-204ENST00000366896 ZNF391Q9UJN7 358 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 KCNIP3Q9Y2W7 256 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 MED19A0JLT2 244 aaPredicted RBP12.71□□□□□ -0.37
PRKN-204ENST00000366896 ZNF727A8MUV8 499 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 IGHEP01854 428 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 OR5H8P0DN80 308 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 CCL3P10147 92 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 RAB35Q15286 201 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 RAET1LQ5VY80 246 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 SPNS3Q6ZMD2 512 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 TMEM182Q6ZP80 229 aaPredicted RBP12.71□□□□□ -0.37
PRKN-204ENST00000366896 OR10D4PQ8NGN7 298 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 Q8WTZ3 238 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 RHOVQ96L33 236 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 SUCNR1Q9BXA5 334 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 SH2D2AQ9NP31 389 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 NECAP2Q9NVZ3 263 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 PLEK2Q9NYT0 353 aa12.71□□□□□ -0.37
PRKN-204ENST00000366896 A0A1B0GV50 99 aa12.7□□□□□ -0.38
PRKN-204ENST00000366896 H3BQ15 152 aa12.7□□□□□ -0.38
PRKN-204ENST00000366896 XRCC2O43543 280 aa12.7□□□□□ -0.38
PRKN-204ENST00000366896 DIRAS3O95661 229 aa12.7□□□□□ -0.38
PRKN-204ENST00000366896 CXCL1P09341 107 aa12.7□□□□□ -0.38
PRKN-204ENST00000366896 SELLP14151 372 aa12.7□□□□□ -0.38
PRKN-204ENST00000366896 LIFP15018 202 aa12.7□□□□□ -0.38
PRKN-204ENST00000366896 CNN3Q15417 329 aaKnown RBP12.7□□□□□ -0.38
PRKN-204ENST00000366896 EXT1Q16394 746 aa12.7□□□□□ -0.38
PRKN-204ENST00000366896 ZNF674Q2M3X9 581 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms