RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 LRRC3CA6NJW4 275 aa10.64□□□□□ -0.71
CDC42BPA-203ENST00000366766 CST7O76096 145 aa10.64□□□□□ -0.71
CDC42BPA-203ENST00000366766 ACAA2P42765 397 aaKnown RBP10.64□□□□□ -0.71
CDC42BPA-203ENST00000366766 TMEM33P57088 247 aa10.64□□□□□ -0.71
CDC42BPA-203ENST00000366766 TMEM183BQ1AE95 376 aa10.64□□□□□ -0.71
CDC42BPA-203ENST00000366766 IGHV3-15A0A0B4J1V0 119 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 CRYM-AS1A6NIL9 109 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 B4E171 279 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 CXXC4Q9H2H0 198 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 OR4A4PQ8NGN8 299 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 PDE6DO43924 150 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 PNPP00491 289 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 GLI4P10075 376 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 MARVELD3Q96A59 401 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 PRRX1P54821 245 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 RAB32Q13637 225 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 BGLAPP02818 100 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 SULT1A1P50225 295 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 CD226Q15762 336 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 ZNF79Q15937 498 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 FAM221AA4D161 298 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 NDUFB3O43676 98 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 TOX4O94842 621 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 ASCL5Q7RTU5 278 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 OR5A2Q8NGI9 324 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 C2CD4CQ8TF44 421 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 ESRP2Q9H6T0 727 aaKnown RBP10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 ERRFI1Q9UJM3 462 aaPredicted RBP10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 SEC14L6B5MCN3 397 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 CCKARP32238 428 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 CEACAM3P40198 252 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 SMRP1Q8NCR6 262 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 DIRC2Q96SL1 478 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 FAM117AQ9C073 453 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 MFNGO00587 321 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 NXPH3O95157 252 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 MVDP53602 400 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 TMEM231Q9H6L2 316 aa10.63□□□□□ -0.71
CDC42BPA-203ENST00000366766 ZNF320A2RRD8 509 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 HELZP42694 1942 aaKnown RBP10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 C6orf201Q7Z4U5 140 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 PLA2G10O15496 165 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 GZMHP20718 246 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 SERF2P84101 59 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 FAM210BQ96KR6 192 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 FAAP24Q9BTP7 215 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 NAT8Q9UHE5 227 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 A0A1B0GTQ1 180 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 LINC01565O15544 149 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 GALR1P47211 349 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 FAM122AQ96E09 287 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 TMEM38BQ9NVV0 291 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 ST6GALNAC2Q9UJ37 374 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 OR2M5A3KFT3 312 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 DXOO77932 396 aaKnown RBP10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 GUSBP11Q6P575 273 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 TMEM92Q6UXU6 159 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 TMEM104Q8NE00 496 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 OR4D11Q8NGI4 311 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 GNRHR2Q96P88 292 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 LHX9Q9NQ69 397 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 MPGP29372 298 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 FABP6P51161 128 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 TPPP3Q9BW30 176 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 WDR13Q9H1Z4 485 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 FAM27BQ5VT28 67 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 HOGA1Q86XE5 327 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 VAMP8Q9BV40 100 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 FAM60AQ9NP50 221 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 LEUTXA8MZ59 168 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 HOXB3P14651 431 aaPredicted RBP10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 AGFG1P52594 562 aaKnown RBP10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 LBHQ53QV2 105 aaPredicted RBP10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 ASAH2BP0C7U1 165 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 PGA4P0DJD7 388 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 PGA5P0DJD9 388 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 F2RP25116 425 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 ORAI1Q96D31 301 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 NARFLQ9H6Q4 476 aa10.62□□□□□ -0.71
CDC42BPA-203ENST00000366766 ZNF737O75373 536 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 PPYP01298 95 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 RPS4Y1P22090 263 aaKnown RBP10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 CDC34P49427 236 aaPredicted RBP10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 Q6ZS52 159 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 OR2W1Q9Y3N9 320 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 HSBP1O75506 76 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 CLEC3BP05452 202 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 TMEM91Q6ZNR0 172 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 PLA2G2FQ9BZM2 168 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 TIMM9Q9Y5J7 89 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 C9orf50Q5SZB4 431 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 INSL4Q14641 139 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 ZNF528Q3MIS6 628 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 OR2Z1Q8NG97 314 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 TRAPPC1Q9Y5R8 145 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 AP4M1O00189 453 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 CLEC1BQ9P126 229 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 YBX1P67809 324 aaKnown RBP10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 CMBLQ96DG6 245 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 M0R1X1 148 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms