RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 OR2T8A6NH00 312 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 CDK2AP1O14519 115 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 ACTL6AO96019 429 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 SOD3P08294 240 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 PRF1P14222 555 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 ZNF25P17030 456 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-202ENST00000357162 SQSTM1Q13501 440 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 HIKESHIQ53FT3 197 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 PIGTQ969N2 578 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 SARGQ9BW04 601 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 CLCF1Q9UBD9 225 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 WASHC3Q9Y3C0 194 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 TIMM9Q9Y5J7 89 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 OR5AL1P0C617 328 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 ZNF865P0CJ78 1059 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-202ENST00000357162 KIAA0040Q15053 153 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 SLC25A35Q3KQZ1 300 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 TP53INP2Q8IXH6 220 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 PRR22Q8IZ63 422 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 BHLHE23Q8NDY6 225 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 OR2T6Q8NHC8 308 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 DPF1Q92782 380 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 C20orf24Q9BUV8 137 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 BRCA1P38398 1863 aaKnown RBP5.85□□□□□ -1.47
VPS13B-202ENST00000357162 TMEM262E9PQX1 116 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 HBZP02008 142 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 ISG15P05161 165 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 HLA-DRB5Q30154 266 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 PRSS56P0CW18 603 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 MPLP40238 635 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 RUNX2Q13950 521 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 OR5AS1Q8N127 324 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 SLCO1C1Q9NYB5 712 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 PTP4A3O75365 173 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 PMELP40967 661 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 RPS11P62280 158 aaKnown RBP eCLIP5.85□□□□□ -1.47
VPS13B-202ENST00000357162 JOSD1Q15040 202 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-202ENST00000357162 SMUG1Q53HV7 270 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 KLK6Q92876 244 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 TMEM45BQ96B21 275 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 LINC00052Q96N35 136 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 COA3Q9Y2R0 106 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-202ENST00000357162 CD27P26842 260 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 PPOXP50336 477 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 RAB9AP51151 201 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 ERVFRD-1P60508 538 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 PYCR3Q53H96 274 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 SAMD13Q5VXD3 122 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 CLEC18BQ6UXF7 455 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 WBP2Q969T9 261 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 ZMAT3Q9HA38 289 aaKnown RBP5.85□□□□□ -1.47
VPS13B-202ENST00000357162 IL21Q9HBE4 155 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 SMPD2O60906 423 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 RGRP47804 291 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 OR51E1Q8TCB6 317 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 ARL2-SNX15V9GYD0 113 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 HELZP42694 1942 aaKnown RBP5.85□□□□□ -1.47
VPS13B-202ENST00000357162 CYR61O00622 381 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 GLIPR1P48060 266 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 ZNF117Q03924 483 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 BLNKQ8WV28 456 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 SLC46A2Q9BY10 475 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 NTMQ9P121 344 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 FITM1A5D6W6 292 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 CCSMST1Q4G0I0 132 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 HES4Q9HCC6 221 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 A0A1B0GW64 132 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 KIAA1324LA8MWY0 1029 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-202ENST00000357162 HCRTO43612 131 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 TMPRSS11DO60235 418 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 TIMP1P01033 207 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 DSCR4P56555 118 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-202ENST00000357162 MRPL58Q14197 206 aaKnown RBP5.85□□□□□ -1.47
VPS13B-202ENST00000357162 CLN8Q9UBY8 286 aa5.85□□□□□ -1.47
VPS13B-202ENST00000357162 KLF13Q9Y2Y9 288 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-202ENST00000357162 IL11RAQ14626 422 aa5.84□□□□□ -1.47
VPS13B-202ENST00000357162 DCAF12Q5T6F0 453 aa5.84□□□□□ -1.47
VPS13B-202ENST00000357162 C17orf78Q8N4C9 275 aa5.84□□□□□ -1.47
VPS13B-202ENST00000357162 CLDN23Q96B33 292 aa5.84□□□□□ -1.47
VPS13B-202ENST00000357162 CISD1Q9NZ45 108 aaKnown RBP5.84□□□□□ -1.47
VPS13B-202ENST00000357162 LMO7DNF2Z398 122 aa5.84□□□□□ -1.47
VPS13B-202ENST00000357162 DANCRP0C864 163 aa5.84□□□□□ -1.47
VPS13B-202ENST00000357162 ARG2P78540 354 aa5.84□□□□□ -1.47
VPS13B-202ENST00000357162 SAPCD1Q5SSQ6 148 aa5.84□□□□□ -1.47
VPS13B-202ENST00000357162 GTF3AQ92664 365 aaKnown RBP5.84□□□□□ -1.47
VPS13B-202ENST00000357162 NAGKQ9UJ70 344 aa5.84□□□□□ -1.47
VPS13B-202ENST00000357162 ALOX12BO75342 701 aa5.84□□□□□ -1.47
VPS13B-202ENST00000357162 C1orf100Q5SVJ3 147 aa5.84□□□□□ -1.47
VPS13B-202ENST00000357162 UBE2FQ969M7 185 aa5.84□□□□□ -1.47
VPS13B-202ENST00000357162 LRP12Q9Y561 859 aa5.84□□□□□ -1.47
VPS13B-202ENST00000357162 TRAV1-1A0A0B4J248 108 aa5.84□□□□□ -1.47
VPS13B-202ENST00000357162 MASP2O00187 686 aa5.84□□□□□ -1.47
VPS13B-202ENST00000357162 RBM45Q8IUH3 476 aaKnown RBP5.84□□□□□ -1.47
VPS13B-202ENST00000357162 NKAIN4Q8IVV8 208 aa5.84□□□□□ -1.47
VPS13B-202ENST00000357162 FBXL14Q8N1E6 418 aa5.84□□□□□ -1.47
VPS13B-202ENST00000357162 PTPMT1Q8WUK0 201 aaPredicted RBP5.84□□□□□ -1.47
VPS13B-202ENST00000357162 MCHR2Q969V1 340 aa5.84□□□□□ -1.47
VPS13B-202ENST00000357162 FGF21Q9NSA1 209 aa5.84□□□□□ -1.47
VPS13B-202ENST00000357162 MRPS2Q9Y399 296 aaKnown RBP5.84□□□□□ -1.47
VPS13B-202ENST00000357162 UBR3Q6ZT12 1888 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms