RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 CEBPDP49716 269 aaPredicted RBP3.27□□□□□ -1.89
CNOT4-202ENST00000356162 RBM11P57052 281 aaKnown RBP3.27□□□□□ -1.89
CNOT4-202ENST00000356162 FABP5Q01469 135 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 PDCD1Q15116 288 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 ZNF124Q15973 351 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 MPV17LQ2QL34 196 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 SYT6Q5T7P8 510 aaPredicted RBP3.27□□□□□ -1.89
CNOT4-202ENST00000356162 METTL11BQ5VVY1 283 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 AWAT2Q6E213 333 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 FAHD2BQ6P2I3 314 aaPredicted RBP3.27□□□□□ -1.89
CNOT4-202ENST00000356162 CD200R1LQ6Q8B3 271 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 IL17RELQ6ZVW7 336 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 LYPD6Q86Y78 171 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 OR8H2Q8N162 312 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 FGFRL1Q8N441 504 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 JAGN1Q8N5M9 183 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 ASCC1Q8N9N2 400 aaKnown RBP3.27□□□□□ -1.89
CNOT4-202ENST00000356162 OR5D13Q8NGL4 314 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 OR6M1Q8NGM8 313 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 NANPQ8TBE9 248 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 H1FXQ92522 213 aaKnown RBP3.27□□□□□ -1.89
CNOT4-202ENST00000356162 ORAI1Q96D31 301 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 FAHD2AQ96GK7 314 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 S100A13Q99584 98 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 SIRPDQ9H106 197 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 IFT22Q9H7X7 185 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 ELL3Q9HB65 397 aaPredicted RBP3.27□□□□□ -1.89
CNOT4-202ENST00000356162 IL36RNQ9UBH0 155 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 GHRLQ9UBU3 117 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 STUB1Q9UNE7 303 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 ING4Q9UNL4 249 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 DOCK11Q5JSL3 2073 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 TRAV1-2A0A0B4J238 106 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 A0A1W2PQ09 198 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 TMEM82A0PJX8 343 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 FAM90A10PA6NDY2 464 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 FAM90A18PA6NE21 464 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 FAM90A16PA6NEW6 464 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 FAM90A20PA6NIJ5 464 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 FAM90A8PA6NJQ4 464 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 FAM90A7PA6NKC0 464 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 FAM90A22PA8MWA6 464 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 FAM90A12PA8MX19 464 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 FAM90A5PA8MXJ8 464 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 FAM90A23PA8MXZ1 464 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 PDCD5O14737 125 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 MGST3O14880 152 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 HTR3BO95264 441 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 OR2H2O95918 312 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 IFNA2P01563 188 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 RBP4P02753 201 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 CSTBP04080 98 aaKnown RBP3.27□□□□□ -1.89
CNOT4-202ENST00000356162 CSN2P05814 226 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 FAM90A15PP0C7V4 464 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 FAM90A13PP0C7W8 464 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 FAM90A14PP0C7W9 464 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 FAM90A24PP0C7X0 464 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 CD37P11049 281 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 SERPINA2P20848 420 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 LMO1P25800 156 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 CFPP27918 469 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 ERP29P30040 261 aaKnown RBP3.27□□□□□ -1.89
CNOT4-202ENST00000356162 OR3A1P47881 315 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 SNU13P55769 128 aaKnown RBP3.27□□□□□ -1.89
CNOT4-202ENST00000356162 BPIFB3P59826 476 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 MEF2CQ06413 473 aaPredicted RBP3.27□□□□□ -1.89
CNOT4-202ENST00000356162 BLMHQ13867 455 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 INSL4Q14641 139 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 GRK1Q15835 563 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 MLANAQ16655 118 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 C1orf100Q5SVJ3 147 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 FAM27D1Q5T7N8 215 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 NCR3LG1Q68D85 454 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 Q6P435 159 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 METAP1DQ6UB28 335 aaPredicted RBP3.27□□□□□ -1.89
CNOT4-202ENST00000356162 GLIPR1L1Q6UWM5 242 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 C9orf139Q6ZV77 190 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 FAM185AQ8N0U4 392 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 OSR2Q8N2R0 312 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 ZNRF1Q8ND25 227 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 TSPAN14Q8NG11 270 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 RNF141Q8WVD5 230 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 MRPS24Q96EL2 167 aaKnown RBP3.27□□□□□ -1.89
CNOT4-202ENST00000356162 WDFY2Q96P53 400 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 NR1H4Q96RI1 486 aaPredicted RBP3.27□□□□□ -1.89
CNOT4-202ENST00000356162 TBX15Q96SF7 602 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 CENPOQ9BU64 300 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 SUCNR1Q9BXA5 334 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 CNTD2Q9H8S5 307 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 ONECUT1Q9UBC0 465 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 NUP50Q9UKX7 468 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 GSTK1Q9Y2Q3 226 aa3.27□□□□□ -1.89
CNOT4-202ENST00000356162 DSCAML1Q8TD84 2053 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 TRAV40A0A0B4J280 105 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 A0A1W2PPK0 400 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 H3BUI4 141 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 SIRPB1O00241 398 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 SLC33A1O00400 549 aaPredicted RBP3.26□□□□□ -1.89
CNOT4-202ENST00000356162 SLC17A2O00624 439 aa3.26□□□□□ -1.89
CNOT4-202ENST00000356162 SLC22A1O15245 554 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms