RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 GFOD1Q9NXC2 390 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 MYOTQ9UBF9 498 aa8.77□□□□□ -1.01
PTPRA-203ENST00000356147 IGHV1OR15-9A0A0B4J2B8 117 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 TLX3O43711 291 aaPredicted RBP8.76□□□□□ -1.01
PTPRA-203ENST00000356147 PPYP01298 95 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 IGHV3-9P01782 118 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 CD63P08962 238 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 ZNF133P52736 654 aaPredicted RBP8.76□□□□□ -1.01
PTPRA-203ENST00000356147 SUCLG1P53597 346 aaKnown RBP8.76□□□□□ -1.01
PTPRA-203ENST00000356147 RPS18P62269 152 aaKnown RBP8.76□□□□□ -1.01
PTPRA-203ENST00000356147 TMEM267Q0VDI3 215 aaPredicted RBP8.76□□□□□ -1.01
PTPRA-203ENST00000356147 WDR25Q64LD2 544 aaPredicted RBP8.76□□□□□ -1.01
PTPRA-203ENST00000356147 SLC25A24Q6NUK1 477 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 TBC1D26Q86UD7 250 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 HIST3H2BBQ8N257 126 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 TSTD1Q8NFU3 115 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 ALKBH3Q96Q83 286 aaPredicted RBP8.76□□□□□ -1.01
PTPRA-203ENST00000356147 HS3ST6Q96QI5 342 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 OR6C1Q96RD1 312 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 RSG1Q9BU20 258 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 ULBP2Q9BZM5 246 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 FOXD3Q9UJU5 478 aaPredicted RBP8.76□□□□□ -1.01
PTPRA-203ENST00000356147 ZNF587BE7ETH6 402 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 NPIPA2E9PIF3 369 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 LMO7DNF2Z398 122 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 NPIPA3F8WFD2 350 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 HMGB3O15347 200 aaKnown RBP8.76□□□□□ -1.01
PTPRA-203ENST00000356147 B4GALT1P15291 398 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 FUT3P21217 361 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 ALDH3B1P43353 468 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 AKR1C8PQ5T2L2 129 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 THNSL2Q86YJ6 484 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 CALHM1Q8IU99 346 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 PLXDC1Q8IUK5 500 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 ODF3L1Q8IXM7 274 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 CMTM1Q8IZ96 169 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 PLPP5Q8NEB5 264 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 NABP1Q96AH0 204 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 SYT3Q9BQG1 590 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 VSIRQ9H7M9 311 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 ZNF665Q9H7R5 613 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 DECR2Q9NUI1 292 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 IL36RNQ9UBH0 155 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 AQP7P3A6NL99 342 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 PHOX2AO14813 284 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 MPPED1O15442 326 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 DHHO43323 396 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 DUX1O43812 170 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 CHST1O43916 411 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 IGLV3-1P01715 115 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 CD55P08174 381 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 SCTP09683 121 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 TUBG1P23258 451 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 LSM6P62312 80 aaKnown RBP8.76□□□□□ -1.01
PTPRA-203ENST00000356147 SHBQ15464 509 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 HIST3H3Q16695 136 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 C1QL4Q86Z23 238 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 CPNE4Q96A23 557 aaPredicted RBP8.76□□□□□ -1.01
PTPRA-203ENST00000356147 TVP23CQ96ET8 276 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 POM121Q96HA1 1249 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 ZNF286AQ9HBT8 521 aa8.76□□□□□ -1.01
PTPRA-203ENST00000356147 NOSIPQ9Y314 301 aaKnown RBP8.76□□□□□ -1.01
PTPRA-203ENST00000356147 CHD3Q12873 2000 aaKnown RBP8.75□□□□□ -1.01
PTPRA-203ENST00000356147 SELLP14151 372 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 ECI1P42126 302 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 RBP2P50120 134 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 ZNF266Q14584 549 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 GAPTQ8N292 157 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 OSR2Q8N2R0 312 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 LFNGQ8NES3 379 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 UBALD1Q8TB05 177 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 FAM210BQ96KR6 192 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 RASL10BQ96S79 203 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 A0A087X0M5 115 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 IGKV1D-13A0A0B4J2D9 117 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 A0A0U1RQV5 110 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 A0A1B0GX30 115 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 A0A1W2PR77 199 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 SEC14L6B5MCN3 397 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 TNFSF11O14788 317 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 SNRPCP09234 159 aaKnown RBP8.75□□□□□ -1.01
PTPRA-203ENST00000356147 IGKV1-13P0DP09 117 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 HIST1H1BP16401 226 aaKnown RBP8.75□□□□□ -1.01
PTPRA-203ENST00000356147 CCNOP22674 350 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 NTF4P34130 210 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 ZNF818PQ6ZRF7 136 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 SLC25A26Q70HW3 274 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 FGFBP3Q8TAT2 258 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 MOB3AQ96BX8 217 aa8.75□□□□□ -1.01
PTPRA-203ENST00000356147 OR5H1A6NKK0 313 aa8.74□□□□□ -1.01
PTPRA-203ENST00000356147 C2CD4DB7Z1M9 353 aa8.74□□□□□ -1.01
PTPRA-203ENST00000356147 IFNL4K9M1U5 179 aa8.74□□□□□ -1.01
PTPRA-203ENST00000356147 NRASP01111 189 aa8.74□□□□□ -1.01
PTPRA-203ENST00000356147 SUMO3P55854 103 aaPredicted RBP8.74□□□□□ -1.01
PTPRA-203ENST00000356147 HNRNPKP61978 463 aaKnown RBP eCLIP8.74□□□□□ -1.011e-6■■■□□ 16
PTPRA-203ENST00000356147 IGFBP7Q16270 282 aa8.74□□□□□ -1.01
PTPRA-203ENST00000356147 C9orf135Q5VTT2 229 aa8.74□□□□□ -1.01
PTPRA-203ENST00000356147 PLCXD3Q63HM9 321 aa8.74□□□□□ -1.01
PTPRA-203ENST00000356147 KDF1Q8NAX2 398 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms