RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 PRRG4Q9BZD6 226 aa16.84■□□□□ 0.29
COL13A1-201ENST00000354547 C3orf85A0A1B0GTC6 90 aa16.84■□□□□ 0.29
COL13A1-201ENST00000354547 NGFP01138 241 aa16.84■□□□□ 0.29
COL13A1-201ENST00000354547 RAB13P51153 203 aa16.84■□□□□ 0.29
COL13A1-201ENST00000354547 POLR2GP62487 172 aaKnown RBP eCLIP16.84■□□□□ 0.29
COL13A1-201ENST00000354547 PRDX4Q13162 271 aa16.84■□□□□ 0.29
COL13A1-201ENST00000354547 C14orf79Q96F83 325 aa16.84■□□□□ 0.29
COL13A1-201ENST00000354547 ZNF488Q96MN9 340 aa16.84■□□□□ 0.29
COL13A1-201ENST00000354547 CLCC1Q96S66 551 aa16.84■□□□□ 0.29
COL13A1-201ENST00000354547 FBXO7Q9Y3I1 522 aa16.84■□□□□ 0.29
COL13A1-201ENST00000354547 MEX3AA1L020 520 aaKnown RBP16.83■□□□□ 0.29
COL13A1-201ENST00000354547 ZNF503-AS2A6NEH8 195 aa16.83■□□□□ 0.29
COL13A1-201ENST00000354547 HSD17B6O14756 317 aa16.83■□□□□ 0.29
COL13A1-201ENST00000354547 GPR137BO60478 399 aa16.83■□□□□ 0.29
COL13A1-201ENST00000354547 CYTIPO60759 359 aa16.83■□□□□ 0.29
COL13A1-201ENST00000354547 LINC00696Q6ZRV3 163 aa16.83■□□□□ 0.29
COL13A1-201ENST00000354547 RGCCQ9H4X1 137 aa16.83■□□□□ 0.29
COL13A1-201ENST00000354547 MED13Q9UHV7 2174 aa16.83■□□□□ 0.28
COL13A1-201ENST00000354547 M0R036 132 aa16.83■□□□□ 0.28
COL13A1-201ENST00000354547 MPPED1O15442 326 aa16.83■□□□□ 0.28
COL13A1-201ENST00000354547 H2AFB1P0C5Y9 115 aa16.83■□□□□ 0.28
COL13A1-201ENST00000354547 GNMTQ14749 295 aa16.83■□□□□ 0.28
COL13A1-201ENST00000354547 NDUFA2O43678 99 aa16.83■□□□□ 0.28
COL13A1-201ENST00000354547 GLAP06280 429 aa16.83■□□□□ 0.28
COL13A1-201ENST00000354547 GNRHRP30968 328 aa16.83■□□□□ 0.28
COL13A1-201ENST00000354547 GFRA1P56159 465 aa16.83■□□□□ 0.28
COL13A1-201ENST00000354547 RIPPLY2Q5TAB7 128 aa16.83■□□□□ 0.28
COL13A1-201ENST00000354547 MRPL21Q7Z2W9 205 aaKnown RBP16.83■□□□□ 0.28
COL13A1-201ENST00000354547 TBC1D26Q86UD7 250 aa16.83■□□□□ 0.28
COL13A1-201ENST00000354547 CCDC71LQ8N9Z2 235 aa16.83■□□□□ 0.28
COL13A1-201ENST00000354547 FAM213BQ8TBF2 198 aa16.83■□□□□ 0.28
COL13A1-201ENST00000354547 PSMF1Q92530 271 aa16.83■□□□□ 0.28
COL13A1-201ENST00000354547 ISOC2Q96AB3 205 aa16.83■□□□□ 0.28
COL13A1-201ENST00000354547 FGF23Q9GZV9 251 aaPredicted RBP16.83■□□□□ 0.28
COL13A1-201ENST00000354547 ZNF175Q9Y473 711 aa16.83■□□□□ 0.28
COL13A1-201ENST00000354547 FOXO1Q12778 655 aa16.82■□□□□ 0.28
COL13A1-201ENST00000354547 GUK1Q16774 197 aa16.82■□□□□ 0.28
COL13A1-201ENST00000354547 AVPI1Q5T686 147 aa16.82■□□□□ 0.28
COL13A1-201ENST00000354547 ZNF695Q8IW36 515 aa16.82■□□□□ 0.28
COL13A1-201ENST00000354547 ZNF565Q8N9K5 539 aa16.82■□□□□ 0.28
COL13A1-201ENST00000354547 SPACA1Q9HBV2 294 aa16.82■□□□□ 0.28
COL13A1-201ENST00000354547 ZNF732B4DXR9 585 aa16.82■□□□□ 0.28
COL13A1-201ENST00000354547 SSSCA1O60232 199 aa16.82■□□□□ 0.28
COL13A1-201ENST00000354547 ZXDAP98168 799 aa16.82■□□□□ 0.28
COL13A1-201ENST00000354547 KRTAP27-1Q3LI81 207 aa16.82■□□□□ 0.28
COL13A1-201ENST00000354547 UBALD2Q8IYN6 164 aa16.82■□□□□ 0.28
COL13A1-201ENST00000354547 DMBX1Q8NFW5 382 aa16.82■□□□□ 0.28
COL13A1-201ENST00000354547 JMJD7P0C870 316 aa16.81■□□□□ 0.28
COL13A1-201ENST00000354547 MAGEA5P43359 124 aa16.81■□□□□ 0.28
COL13A1-201ENST00000354547 TMEM211Q6ICI0 200 aa16.81■□□□□ 0.28
COL13A1-201ENST00000354547 DPPA2Q7Z7J5 298 aa16.81■□□□□ 0.28
COL13A1-201ENST00000354547 GAPTQ8N292 157 aa16.81■□□□□ 0.28
COL13A1-201ENST00000354547 TMEM217Q8N7C4 229 aa16.81■□□□□ 0.28
COL13A1-201ENST00000354547 C1QTNF5Q9BXJ0 243 aa16.81■□□□□ 0.28
COL13A1-201ENST00000354547 LUZP4Q9P127 313 aa16.81■□□□□ 0.28
COL13A1-201ENST00000354547 HS3ST1O14792 307 aa16.81■□□□□ 0.28
COL13A1-201ENST00000354547 SERPINA7P05543 415 aa16.81■□□□□ 0.28
COL13A1-201ENST00000354547 ZNF528Q3MIS6 628 aa16.81■□□□□ 0.28
COL13A1-201ENST00000354547 CXorf66Q5JRM2 361 aaPredicted RBP16.81■□□□□ 0.28
COL13A1-201ENST00000354547 ZNF818PQ6ZRF7 136 aa16.81■□□□□ 0.28
COL13A1-201ENST00000354547 IQCF2Q8IXL9 164 aa16.81■□□□□ 0.28
COL13A1-201ENST00000354547 CD300LFQ8TDQ1 290 aa16.81■□□□□ 0.28
COL13A1-201ENST00000354547 IP6K3Q96PC2 410 aa16.81■□□□□ 0.28
COL13A1-201ENST00000354547 C19orf12Q9NSK7 152 aa16.81■□□□□ 0.28
COL13A1-201ENST00000354547 ZNF391Q9UJN7 358 aa16.81■□□□□ 0.28
COL13A1-201ENST00000354547 IGKV1D-13A0A0B4J2D9 117 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 IGHV3-64DA0A0J9YX35 117 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 DANCRP0C864 163 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 OR13C7P0DN81 318 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 IGKV1-13P0DP09 117 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 SNCAP37840 140 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 P2RY1P47900 373 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 CEBPGP53567 150 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 SSPNQ14714 243 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 ZNF100Q8IYN0 542 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 ABHD14AQ9BUJ0 271 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 RSRP1Q9BUV0 290 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 ESRP2Q9H6T0 727 aaKnown RBP16.8■□□□□ 0.28
COL13A1-201ENST00000354547 CACFD1Q9UGQ2 172 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 GPR37O15354 613 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 SYNGR1O43759 233 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 CST7O76096 145 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 IGHEP01854 428 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 TK1P04183 234 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 HPSE2Q8WWQ2 592 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 RDH5Q92781 318 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 USB1Q9BQ65 265 aaKnown RBP16.8■□□□□ 0.28
COL13A1-201ENST00000354547 ZNF552Q9H707 407 aaPredicted RBP16.8■□□□□ 0.28
COL13A1-201ENST00000354547 IL36GQ9NZH8 169 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 MTCH1Q9NZJ7 389 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 BOKQ9UMX3 212 aaPredicted RBP16.8■□□□□ 0.28
COL13A1-201ENST00000354547 FAM157AC9JC47 383 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 ADAM20O43506 726 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 PPP1CCP36873 323 aaKnown RBP16.8■□□□□ 0.28
COL13A1-201ENST00000354547 EWSR1Q01844 656 aaKnown RBP eCLIP16.8■□□□□ 0.28
COL13A1-201ENST00000354547 CCL28Q9NRJ3 127 aa16.8■□□□□ 0.28
COL13A1-201ENST00000354547 DIDO1Q9BTC0 2240 aaKnown RBP16.8■□□□□ 0.28
COL13A1-201ENST00000354547 RPL36A-HNRNPH2H7BZ11 118 aa16.79■□□□□ 0.28
COL13A1-201ENST00000354547 NKX2-1P43699 371 aaPredicted RBP16.79■□□□□ 0.28
COL13A1-201ENST00000354547 C17orf78Q8N4C9 275 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms