RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 ZNF506Q5JVG8 444 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 CST9Q5W186 159 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 PLCXD3Q63HM9 321 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 TMEM108Q6UXF1 575 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 KMT5CQ86Y97 462 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 OR10G4Q8NGN3 311 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 OR10G9Q8NGN4 311 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 OR10G7Q8NGN6 311 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 OTOSQ8NHW6 89 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 CLN8Q9UBY8 286 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 LRRK1Q38SD2 2015 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 SERINC4A6NH21 518 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 NXPH3O95157 252 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 TNFRSF6BO95407 300 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 GZMBP10144 247 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 EPHA8P29322 1005 aaPredicted RBP4.48□□□□□ -1.69
SKP1-202ENST00000353411 FGF8P55075 233 aaPredicted RBP4.48□□□□□ -1.69
SKP1-202ENST00000353411 RPL27P61353 136 aaKnown RBP4.48□□□□□ -1.69
SKP1-202ENST00000353411 MRPL49Q13405 166 aaKnown RBP4.48□□□□□ -1.69
SKP1-202ENST00000353411 WDFY1Q8IWB7 410 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 OR8I2Q8N0Y5 310 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 ALG14Q96F25 216 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 SLC35A4Q96G79 324 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 EAF1Q96JC9 268 aaPredicted RBP4.48□□□□□ -1.69
SKP1-202ENST00000353411 GKN1Q9NS71 199 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 TRBV24-1A0A075B6N3 115 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 A0A0A6YYC8 382 aaPredicted RBP4.48□□□□□ -1.69
SKP1-202ENST00000353411 CTXND1A0A1B0GTU2 59 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 MED19A0JLT2 244 aaPredicted RBP4.48□□□□□ -1.69
SKP1-202ENST00000353411 C19orf67A6NJJ6 358 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 I3L1I5 382 aaPredicted RBP4.48□□□□□ -1.69
SKP1-202ENST00000353411 GPR75O95800 540 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 AMBPP02760 352 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 PLGLB1Q02325 96 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 LIAT1Q6ZQX7 453 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 ADAD2Q8NCV1 583 aaKnown RBP4.48□□□□□ -1.69
SKP1-202ENST00000353411 CACNG4Q9UBN1 327 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 OR2W5A6NFC9 320 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 ARPC3O15145 178 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 SNCGO76070 127 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 MPZP25189 248 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 LSM11P83369 360 aaKnown RBP eCLIP4.48□□□□□ -1.69
SKP1-202ENST00000353411 HES1Q14469 280 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 PSMG4Q5JS54 123 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 H2BFWTQ7Z2G1 175 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 C6orf201Q7Z4U5 140 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 OR52N5Q8NH56 324 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 NKX6-3A6NJ46 265 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 G3V3Y1 287 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 TMEM250H0YL14 139 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 TUSC2O75896 110 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 CNIH1O95406 144 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 CXCL14O95715 111 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 DCDP81605 110 aaKnown RBP4.47□□□□□ -1.69
SKP1-202ENST00000353411 RAET1LQ5VY80 246 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 OR10S1Q8NGN2 331 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 OR1L3Q8NH93 324 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 OR2V1Q8NHB1 315 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 SDF2Q99470 211 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 MRPL18Q9H0U6 180 aaKnown RBP4.47□□□□□ -1.69
SKP1-202ENST00000353411 ELOVL5Q9NYP7 299 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 FRMPD3Q5JV73 1810 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 A0A1B0GW64 132 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 RNF222A6NCQ9 220 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 ONECUT2O95948 504 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 NPSP0C0P6 89 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 MC5RP33032 325 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 C10orf91Q5T1B1 145 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 ABHD3Q8WU67 409 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 ZNF707Q96C28 371 aaPredicted RBP4.47□□□□□ -1.69
SKP1-202ENST00000353411 WDR34Q96EX3 536 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 HINT2Q9BX68 163 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 SNHG12Q9BXW3 62 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 S1PR5Q9H228 398 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 ST6GALNAC2Q9UJ37 374 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 CDIPTO14735 213 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 VAMP5O95183 116 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 PEX11BO96011 259 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 SLC38A11Q08AI6 406 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 TPTE2P1Q5T6R2 138 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 HOGA1Q86XE5 327 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 SLC16A11Q8NCK7 471 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 OR13G1Q8NGZ3 307 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 OR4S2Q8NH73 311 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 C4orf45Q96LM5 186 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 DEFB118Q96PH6 123 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 HS3ST3A1Q9Y663 406 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 COX11Q9Y6N1 276 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 DNAJC25-GNG10A0A024R161 153 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 C3orf85A0A1B0GTC6 90 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 C17orf105B2RV13 164 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 EREGO14944 169 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 MELTFP08582 738 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 F2RP25116 425 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 NTSR1P30989 418 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 LIMS1P48059 325 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 PCBD1P61457 104 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 PRDX1Q06830 199 aaKnown RBP4.47□□□□□ -1.69
SKP1-202ENST00000353411 SMAGPQ0VAQ4 97 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 SPNS2Q8IVW8 549 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms