RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 PNPP00491 289 aa14.06□□□□□ -0.16
PTPN11-201ENST00000351677 CD200P41217 278 aa14.06□□□□□ -0.16
PTPN11-201ENST00000351677 MMP16P51512 607 aa14.06□□□□□ -0.16
PTPN11-201ENST00000351677 LIAT1Q6ZQX7 453 aa14.06□□□□□ -0.16
PTPN11-201ENST00000351677 ZNF426Q9BUY5 554 aa14.06□□□□□ -0.16
PTPN11-201ENST00000351677 CELA2AP08217 269 aa14.06□□□□□ -0.16
PTPN11-201ENST00000351677 TMEM56Q96MV1 263 aa14.06□□□□□ -0.16
PTPN11-201ENST00000351677 CCL28Q9NRJ3 127 aa14.06□□□□□ -0.16
PTPN11-201ENST00000351677 TINAGQ9UJW2 476 aa14.06□□□□□ -0.16
PTPN11-201ENST00000351677 KLK13Q9UKR3 277 aa14.06□□□□□ -0.16
PTPN11-201ENST00000351677 ARL2-SNX15V9GYD0 113 aa14.06□□□□□ -0.16
PTPN11-201ENST00000351677 BRWD3Q6RI45 1802 aa14.06□□□□□ -0.16
PTPN11-201ENST00000351677 RBBP6Q7Z6E9 1792 aaKnown RBP14.06□□□□□ -0.16
PTPN11-201ENST00000351677 SPINK4O60575 86 aa14.06□□□□□ -0.16
PTPN11-201ENST00000351677 FOSL1P15407 271 aa14.06□□□□□ -0.16
PTPN11-201ENST00000351677 KRTDAPP60985 99 aa14.06□□□□□ -0.16
PTPN11-201ENST00000351677 PLPPR5Q32ZL2 321 aa14.06□□□□□ -0.16
PTPN11-201ENST00000351677 RNF212Q495C1 297 aa14.06□□□□□ -0.16
PTPN11-201ENST00000351677 TTRP02766 147 aa14.05□□□□□ -0.16
PTPN11-201ENST00000351677 COL19A1Q14993 1142 aa14.05□□□□□ -0.16
PTPN11-201ENST00000351677 SURF2Q15527 256 aaPredicted RBP14.05□□□□□ -0.16
PTPN11-201ENST00000351677 RGPD3A6NKT7 1758 aaPredicted RBP14.05□□□□□ -0.16
PTPN11-201ENST00000351677 SEC16AO15027 2179 aa14.05□□□□□ -0.16
PTPN11-201ENST00000351677 CHST1O43916 411 aa14.05□□□□□ -0.16
PTPN11-201ENST00000351677 PPYP01298 95 aa14.05□□□□□ -0.16
PTPN11-201ENST00000351677 ANKRD34CP0C6C1 535 aa14.05□□□□□ -0.16
PTPN11-201ENST00000351677 C10orf35Q96D05 121 aa14.05□□□□□ -0.16
PTPN11-201ENST00000351677 SCMH1Q96GD3 660 aa14.05□□□□□ -0.16
PTPN11-201ENST00000351677 VSIG4Q9Y279 399 aa14.05□□□□□ -0.16
PTPN11-201ENST00000351677 RGS13O14921 159 aa14.05□□□□□ -0.16
PTPN11-201ENST00000351677 CTSBP07858 339 aa14.05□□□□□ -0.16
PTPN11-201ENST00000351677 GALR1P47211 349 aa14.05□□□□□ -0.16
PTPN11-201ENST00000351677 SNRPEP62304 92 aaKnown RBP14.05□□□□□ -0.16
PTPN11-201ENST00000351677 ZNF66Q6ZN08 573 aa14.05□□□□□ -0.16
PTPN11-201ENST00000351677 TRAPPC1Q9Y5R8 145 aa14.05□□□□□ -0.16
PTPN11-201ENST00000351677 PHOX2AO14813 284 aa14.05□□□□□ -0.16
PTPN11-201ENST00000351677 ZNF250P15622 560 aa14.05□□□□□ -0.16
PTPN11-201ENST00000351677 TMEM241Q24JQ0 296 aa14.05□□□□□ -0.16
PTPN11-201ENST00000351677 TMEM108Q6UXF1 575 aa14.05□□□□□ -0.16
PTPN11-201ENST00000351677 OR10G4Q8NGN3 311 aa14.05□□□□□ -0.16
PTPN11-201ENST00000351677 OR10G9Q8NGN4 311 aa14.05□□□□□ -0.16
PTPN11-201ENST00000351677 OR10G7Q8NGN6 311 aa14.05□□□□□ -0.16
PTPN11-201ENST00000351677 OR6S1Q8NH40 331 aa14.05□□□□□ -0.16
PTPN11-201ENST00000351677 CKAP5Q14008 2032 aa14.05□□□□□ -0.16
PTPN11-201ENST00000351677 FABP4P15090 132 aa14.04□□□□□ -0.16
PTPN11-201ENST00000351677 RAB7AP51149 207 aa14.04□□□□□ -0.16
PTPN11-201ENST00000351677 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.04□□□□□ -0.16
PTPN11-201ENST00000351677 TRAT1Q6PIZ9 186 aa14.04□□□□□ -0.16
PTPN11-201ENST00000351677 PARP14Q460N5 1801 aa14.04□□□□□ -0.16
PTPN11-201ENST00000351677 DOCK3Q8IZD9 2030 aa14.04□□□□□ -0.16
PTPN11-201ENST00000351677 CDRT15L2A8MXV6 281 aa14.04□□□□□ -0.16
PTPN11-201ENST00000351677 ZNF154Q13106 437 aa14.04□□□□□ -0.16
PTPN11-201ENST00000351677 FBLIM1Q8WUP2 373 aa14.04□□□□□ -0.16
PTPN11-201ENST00000351677 TOLLIPQ9H0E2 274 aa14.04□□□□□ -0.16
PTPN11-201ENST00000351677 LYZL2Q7Z4W2 148 aa14.04□□□□□ -0.16
PTPN11-201ENST00000351677 SLC2A9Q9NRM0 540 aa14.04□□□□□ -0.16
PTPN11-201ENST00000351677 SEC14L6B5MCN3 397 aa14.04□□□□□ -0.16
PTPN11-201ENST00000351677 KCNAB3O43448 404 aa14.04□□□□□ -0.16
PTPN11-201ENST00000351677 FGF2P09038 288 aa14.04□□□□□ -0.16
PTPN11-201ENST00000351677 COL13A1Q5TAT6 717 aaPredicted RBP14.04□□□□□ -0.16
PTPN11-201ENST00000351677 BHLHA15Q7RTS1 189 aaPredicted RBP14.04□□□□□ -0.16
PTPN11-201ENST00000351677 OR2M7Q8NG81 312 aa14.04□□□□□ -0.16
PTPN11-201ENST00000351677 OR2T6Q8NHC8 308 aa14.04□□□□□ -0.16
PTPN11-201ENST00000351677 AMELYQ99218 206 aa14.04□□□□□ -0.16
PTPN11-201ENST00000351677 CHST5Q9GZS9 411 aa14.04□□□□□ -0.16
PTPN11-201ENST00000351677 HAND1O96004 215 aa14.04□□□□□ -0.16
PTPN11-201ENST00000351677 COX7A1P24310 79 aa14.04□□□□□ -0.16
PTPN11-201ENST00000351677 CHAC2Q8WUX2 184 aa14.04□□□□□ -0.16
PTPN11-201ENST00000351677 IL36GQ9NZH8 169 aa14.04□□□□□ -0.16
PTPN11-201ENST00000351677 DOK5Q9P104 306 aa14.04□□□□□ -0.16
PTPN11-201ENST00000351677 M0R296 226 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 ZNHIT1O43257 154 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 P2RY1P47900 373 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 CDC34P49427 236 aaPredicted RBP14.03□□□□□ -0.16
PTPN11-201ENST00000351677 RPEQ96AT9 228 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 DXOO77932 396 aaKnown RBP14.03□□□□□ -0.16
PTPN11-201ENST00000351677 FCARP24071 287 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 PMELP40967 661 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 BVESQ8NE79 360 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 OR5D13Q8NGL4 314 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 HES7Q9BYE0 225 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 LIPGQ9Y5X9 500 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 XIRP1Q702N8 1843 aaKnown RBP14.03□□□□□ -0.16
PTPN11-201ENST00000351677 PAX6P26367 422 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 HFEQ30201 348 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 HSD17B13Q7Z5P4 300 aaPredicted RBP14.03□□□□□ -0.16
PTPN11-201ENST00000351677 KCNE5Q9UJ90 142 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 POMT1Q9Y6A1 747 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 CHRNA7P36544 502 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 SLC24A4Q8NFF2 622 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 WDR54Q9H977 334 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 A0A1W2PPC1 479 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 XKRY2A2RUG3 117 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 CLDN34H7C241 214 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 SYNGR2O43760 224 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 ACTL6AO96019 429 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 IL24Q13007 206 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 MOGAT2Q3SYC2 334 aa14.03□□□□□ -0.16
PTPN11-201ENST00000351677 MYPOPQ86VE0 399 aaPredicted RBP14.03□□□□□ -0.16
PTPN11-201ENST00000351677 LPAR3Q9UBY5 353 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms