RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 LGI3Q8N145 548 aa12.5□□□□□ -0.41
ARHGEF1-202ENST00000347545 GPHA2Q96T91 129 aa12.5□□□□□ -0.41
ARHGEF1-202ENST00000347545 PRDM14Q9GZV8 571 aa12.5□□□□□ -0.41
ARHGEF1-202ENST00000347545 ZNF442Q9H7R0 627 aa12.5□□□□□ -0.41
ARHGEF1-202ENST00000347545 OR7C1O76099 320 aaPredicted RBP12.49□□□□□ -0.41
ARHGEF1-202ENST00000347545 CELA3AP09093 270 aa12.49□□□□□ -0.41
ARHGEF1-202ENST00000347545 CCL2P13500 99 aa12.49□□□□□ -0.41
ARHGEF1-202ENST00000347545 HAAOP46952 286 aa12.49□□□□□ -0.41
ARHGEF1-202ENST00000347545 PPT1P50897 306 aa12.49□□□□□ -0.41
ARHGEF1-202ENST00000347545 FBXW12Q6X9E4 464 aa12.49□□□□□ -0.41
ARHGEF1-202ENST00000347545 SLAMF9Q96A28 289 aa12.49□□□□□ -0.41
ARHGEF1-202ENST00000347545 SLC7A10Q9NS82 523 aa12.49□□□□□ -0.41
ARHGEF1-202ENST00000347545 ARHGAP21Q5T5U3 1957 aa12.49□□□□□ -0.41
ARHGEF1-202ENST00000347545 NKX2-6A6NCS4 301 aa12.49□□□□□ -0.41
ARHGEF1-202ENST00000347545 HERPUD1Q15011 391 aa12.49□□□□□ -0.41
ARHGEF1-202ENST00000347545 GPR157Q5UAW9 335 aa12.49□□□□□ -0.41
ARHGEF1-202ENST00000347545 C9orf135Q5VTT2 229 aa12.49□□□□□ -0.41
ARHGEF1-202ENST00000347545 SPINK14Q6IE38 97 aa12.49□□□□□ -0.41
ARHGEF1-202ENST00000347545 MEX3BQ6ZN04 569 aaKnown RBP12.49□□□□□ -0.41
ARHGEF1-202ENST00000347545 TMEM105Q8N8V8 129 aa12.49□□□□□ -0.41
ARHGEF1-202ENST00000347545 OR56B2PQ8NGI1 322 aa12.49□□□□□ -0.41
ARHGEF1-202ENST00000347545 TMEM45BQ96B21 275 aa12.49□□□□□ -0.41
ARHGEF1-202ENST00000347545 FAM212BQ9NTI7 297 aaPredicted RBP12.49□□□□□ -0.41
ARHGEF1-202ENST00000347545 MRPS18CQ9Y3D5 142 aaKnown RBP12.49□□□□□ -0.41
ARHGEF1-202ENST00000347545 MPPED1O15442 326 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 S100A9P06702 114 aaKnown RBP12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 PMELP40967 661 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 DUSP3P51452 185 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 IL13RA2Q14627 380 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 FAM76BQ5HYJ3 339 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 EXTL1Q92935 676 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 CPNE4Q96A23 557 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 CLCC1Q96S66 551 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 TINAGQ9UJW2 476 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 C3orf85A0A1B0GTC6 90 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 A0A1W2PPE3 182 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 B4E171 279 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 RPL36A-HNRNPH2H7BZ11 118 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 IGHEP01854 428 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 TSPAN7P41732 249 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 ARF1P84077 181 aaKnown RBP12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 BOD1Q96IK1 185 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 PRRG4Q9BZD6 226 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 PARPBPQ9NWS1 579 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 MIOXQ9UGB7 285 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 A0A096LPE4 126 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 A0A1W2PPZ6 126 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 ST8SIA3O43173 380 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 GLP1RP43220 463 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 HERV-K104P61576 105 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 HABP2Q14520 560 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 ODF3L1Q8IXM7 274 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 TECTBQ96PL2 329 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 REPIN1Q9BWE0 567 aaKnown RBP12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 HES7Q9BYE0 225 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 TMEM222Q9H0R3 208 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 RNF122Q9H9V4 155 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 PLSCR2Q9NRY7 297 aa12.48□□□□□ -0.41
ARHGEF1-202ENST00000347545 ESPL1Q14674 2120 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 IGKV3D-15A0A087WSY6 115 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 IGKV1D-13A0A0B4J2D9 117 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 IGSF23A1L1A6 192 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 TRDCB7Z8K6 153 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 C3orf80F5H4A9 247 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 TSPAN15O95858 294 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 NAPSAO96009 420 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 S100A6P06703 90 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 SCTP09683 121 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 IGKV1-13P0DP09 117 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 ZNF616Q08AN1 781 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 PRDX4Q13162 271 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 PEA15Q15121 130 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 UBALD2Q8IYN6 164 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 HSD17B11Q8NBQ5 300 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 IER2Q9BTL4 223 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 C19orf12Q9NSK7 152 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 IGKV1-6A0A0C4DH72 117 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 CER1O95813 267 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 SERPINA7P05543 415 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 CYB561P49447 251 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 LHX2P50458 406 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 EWSR1Q01844 656 aaKnown RBP eCLIP12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 GUK1Q16774 197 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 ZNF818PQ6ZRF7 136 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 Q6ZS49 121 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 TBC1D26Q86UD7 250 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 TCEAL3Q969E4 200 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 SYT3Q9BQG1 590 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 PAPOLGQ9BWT3 736 aaKnown RBP12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 EGLN1Q9GZT9 426 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 Q9N2K0 584 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 NOSIPQ9Y314 301 aaKnown RBP12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 TMED3Q9Y3Q3 217 aa12.47□□□□□ -0.41
ARHGEF1-202ENST00000347545 BORCS7-ASMTA0A0B4J1R7 106 aa12.46□□□□□ -0.41
ARHGEF1-202ENST00000347545 HLA-HP01893 362 aa12.46□□□□□ -0.41
ARHGEF1-202ENST00000347545 SPINK2P20155 84 aa12.46□□□□□ -0.41
ARHGEF1-202ENST00000347545 GPM6AP51674 278 aa12.46□□□□□ -0.41
ARHGEF1-202ENST00000347545 DCAF12Q5T6F0 453 aa12.46□□□□□ -0.41
ARHGEF1-202ENST00000347545 CCDC71LQ8N9Z2 235 aa12.46□□□□□ -0.41
ARHGEF1-202ENST00000347545 C14orf79Q96F83 325 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms