RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 PSORS1C1Q9UIG5 152 aa11.68□□□□□ -0.54
HMGN3-202ENST00000344726 ZNF281Q9Y2X9 895 aa11.68□□□□□ -0.54
HMGN3-202ENST00000344726 TRBV5-5A0A0J9YX44 114 aa11.67□□□□□ -0.54
HMGN3-202ENST00000344726 TSPAN9O75954 239 aa11.67□□□□□ -0.54
HMGN3-202ENST00000344726 ZNF44P15621 663 aa11.67□□□□□ -0.54
HMGN3-202ENST00000344726 C21orf33P30042 268 aaPredicted RBP11.67□□□□□ -0.54
HMGN3-202ENST00000344726 TGFBR2P37173 567 aa11.67□□□□□ -0.54
HMGN3-202ENST00000344726 OR3A4PP47883 348 aa11.67□□□□□ -0.54
HMGN3-202ENST00000344726 GLIPR1P48060 266 aa11.67□□□□□ -0.54
HMGN3-202ENST00000344726 MTNR1BP49286 362 aa11.67□□□□□ -0.54
HMGN3-202ENST00000344726 LGALS4P56470 323 aa11.67□□□□□ -0.54
HMGN3-202ENST00000344726 AESQ08117 197 aa11.67□□□□□ -0.54
HMGN3-202ENST00000344726 AANATQ16613 207 aa11.67□□□□□ -0.54
HMGN3-202ENST00000344726 PLA1AQ53H76 456 aa11.67□□□□□ -0.54
HMGN3-202ENST00000344726 ELP2Q6IA86 826 aa11.67□□□□□ -0.54
HMGN3-202ENST00000344726 SATL1Q86VE3 508 aa11.67□□□□□ -0.54
HMGN3-202ENST00000344726 PXT1Q8NFP0 134 aa11.67□□□□□ -0.54
HMGN3-202ENST00000344726 OR13D1Q8NGV5 346 aa11.67□□□□□ -0.54
HMGN3-202ENST00000344726 OR10K1Q8NGX5 313 aa11.67□□□□□ -0.54
HMGN3-202ENST00000344726 TNFAIP8L1Q8WVP5 186 aa11.67□□□□□ -0.54
HMGN3-202ENST00000344726 NRG4Q8WWG1 115 aa11.67□□□□□ -0.54
HMGN3-202ENST00000344726 TFAP2CQ92754 450 aa11.67□□□□□ -0.54
HMGN3-202ENST00000344726 GHSRQ92847 366 aa11.67□□□□□ -0.54
HMGN3-202ENST00000344726 DCLRE1BQ9H816 532 aa11.67□□□□□ -0.54
HMGN3-202ENST00000344726 PLCXD1Q9NUJ7 323 aa11.67□□□□□ -0.54
HMGN3-202ENST00000344726 SESN1Q9Y6P5 492 aa11.67□□□□□ -0.54
HMGN3-202ENST00000344726 IGHV2-26A0A0B4J1V2 119 aa11.66□□□□□ -0.54
HMGN3-202ENST00000344726 MAGEA13PA6NCF6 341 aa11.66□□□□□ -0.54
HMGN3-202ENST00000344726 EFCAB10A6NFE3 127 aa11.66□□□□□ -0.54
HMGN3-202ENST00000344726 CHST1O43916 411 aa11.66□□□□□ -0.54
HMGN3-202ENST00000344726 ALDOBP05062 364 aa11.66□□□□□ -0.54
HMGN3-202ENST00000344726 CSN2P05814 226 aa11.66□□□□□ -0.54
HMGN3-202ENST00000344726 CD2P06729 351 aa11.66□□□□□ -0.54
HMGN3-202ENST00000344726 JUNBP17275 347 aaPredicted RBP11.66□□□□□ -0.54
HMGN3-202ENST00000344726 IGFBP3P17936 291 aaPredicted RBP11.66□□□□□ -0.54
HMGN3-202ENST00000344726 GDNFP39905 211 aa11.66□□□□□ -0.54
HMGN3-202ENST00000344726 RAB13P51153 203 aa11.66□□□□□ -0.54
HMGN3-202ENST00000344726 HIST2H2BDQ6DRA6 164 aa11.66□□□□□ -0.54
HMGN3-202ENST00000344726 SLC35E4Q6ICL7 350 aa11.66□□□□□ -0.54
HMGN3-202ENST00000344726 ASCL4Q6XD76 172 aa11.66□□□□□ -0.54
HMGN3-202ENST00000344726 AHSA2Q719I0 299 aa11.66□□□□□ -0.54
HMGN3-202ENST00000344726 TRAPPC6BQ86SZ2 158 aa11.66□□□□□ -0.54
HMGN3-202ENST00000344726 BPIFB6Q8NFQ5 453 aa11.66□□□□□ -0.54
HMGN3-202ENST00000344726 NR1H4Q96RI1 486 aaPredicted RBP11.66□□□□□ -0.54
HMGN3-202ENST00000344726 GPER1Q99527 375 aa11.66□□□□□ -0.54
HMGN3-202ENST00000344726 PPIL3Q9H2H8 161 aaKnown RBP11.66□□□□□ -0.54
HMGN3-202ENST00000344726 FKBP14Q9NWM8 211 aa11.66□□□□□ -0.54
HMGN3-202ENST00000344726 ING3Q9NXR8 418 aa11.66□□□□□ -0.54
HMGN3-202ENST00000344726 CNOT2Q9NZN8 540 aaKnown RBP11.66□□□□□ -0.54
HMGN3-202ENST00000344726 ZNF581Q9P0T4 197 aa11.66□□□□□ -0.54
HMGN3-202ENST00000344726 SIGLEC9Q9Y336 463 aa11.66□□□□□ -0.54
HMGN3-202ENST00000344726 UBE2J1Q9Y385 318 aaPredicted RBP11.66□□□□□ -0.54
HMGN3-202ENST00000344726 TBL2Q9Y4P3 447 aaKnown RBP11.66□□□□□ -0.54
HMGN3-202ENST00000344726 PCDHGB5Q9Y5G0 923 aa11.66□□□□□ -0.54
HMGN3-202ENST00000344726 PRKDCP78527 4128 aaKnown RBP11.65□□□□□ -0.54
HMGN3-202ENST00000344726 TRAV24A0A0B4J272 114 aa11.65□□□□□ -0.54
HMGN3-202ENST00000344726 PNMA8CA0A1B0GUJ8 204 aa11.65□□□□□ -0.54
HMGN3-202ENST00000344726 ODAMA1E959 279 aa11.65□□□□□ -0.54
HMGN3-202ENST00000344726 VGLL3A8MV65 326 aa11.65□□□□□ -0.54
HMGN3-202ENST00000344726 HSPB6O14558 160 aa11.65□□□□□ -0.54
HMGN3-202ENST00000344726 DEGS1O15121 323 aa11.65□□□□□ -0.54
HMGN3-202ENST00000344726 MAGEB3O15480 346 aa11.65□□□□□ -0.54
HMGN3-202ENST00000344726 CDRT1O95170 752 aa11.65□□□□□ -0.54
HMGN3-202ENST00000344726 DYNC1I2Q13409 638 aaKnown RBP11.65□□□□□ -0.54
HMGN3-202ENST00000344726 ATXN7L3Q14CW9 347 aaPredicted RBP11.65□□□□□ -0.54
HMGN3-202ENST00000344726 SSX2Q16385 188 aa11.65□□□□□ -0.54
HMGN3-202ENST00000344726 PIGYQ3MUY2 71 aa11.65□□□□□ -0.54
HMGN3-202ENST00000344726 UTF1Q5T230 341 aa11.65□□□□□ -0.54
HMGN3-202ENST00000344726 PRAMEF5Q5TYX0 476 aa11.65□□□□□ -0.54
HMGN3-202ENST00000344726 CCBE1Q6UXH8 406 aaPredicted RBP11.65□□□□□ -0.54
HMGN3-202ENST00000344726 CHST4Q8NCG5 386 aa11.65□□□□□ -0.54
HMGN3-202ENST00000344726 Q8NFD4 153 aa11.65□□□□□ -0.54
HMGN3-202ENST00000344726 OR51T1Q8NGJ9 327 aa11.65□□□□□ -0.54
HMGN3-202ENST00000344726 CORO2AQ92828 525 aa11.65□□□□□ -0.54
HMGN3-202ENST00000344726 FAM192AQ9GZU8 254 aa11.65□□□□□ -0.54
HMGN3-202ENST00000344726 TMEM133Q9H2Q1 129 aa11.65□□□□□ -0.54
HMGN3-202ENST00000344726 TMEM138Q9NPI0 162 aa11.65□□□□□ -0.54
HMGN3-202ENST00000344726 CHCHD3Q9NX63 227 aaKnown RBP11.65□□□□□ -0.54
HMGN3-202ENST00000344726 TET2Q6N021 2002 aaPredicted RBP11.64□□□□□ -0.55
HMGN3-202ENST00000344726 NOTCH1P46531 2555 aa11.64□□□□□ -0.55
HMGN3-202ENST00000344726 TRAV8-7A0A075B6U6 113 aa11.64□□□□□ -0.55
HMGN3-202ENST00000344726 TRGV10A0A0A0MS01 117 aa11.64□□□□□ -0.55
HMGN3-202ENST00000344726 H0YJX3 145 aa11.64□□□□□ -0.55
HMGN3-202ENST00000344726 BDKRB2P30411 391 aa11.64□□□□□ -0.55
HMGN3-202ENST00000344726 PTGFRP43088 359 aa11.64□□□□□ -0.55
HMGN3-202ENST00000344726 SLC34A1Q06495 639 aa11.64□□□□□ -0.55
HMGN3-202ENST00000344726 MED21Q13503 144 aa11.64□□□□□ -0.55
HMGN3-202ENST00000344726 C17orf58Q2M2W7 97 aa11.64□□□□□ -0.55
HMGN3-202ENST00000344726 Q499Y3 187 aa11.64□□□□□ -0.55
HMGN3-202ENST00000344726 YIF1BQ5BJH7 314 aa11.64□□□□□ -0.55
HMGN3-202ENST00000344726 KRBOX4Q5JUW0 171 aa11.64□□□□□ -0.55
HMGN3-202ENST00000344726 DDI2Q5TDH0 399 aa11.64□□□□□ -0.55
HMGN3-202ENST00000344726 HEPN1Q6WQI6 88 aa11.64□□□□□ -0.55
HMGN3-202ENST00000344726 MALSU1Q96EH3 234 aa11.64□□□□□ -0.55
HMGN3-202ENST00000344726 CPNE2Q96FN4 548 aaPredicted RBP11.64□□□□□ -0.55
HMGN3-202ENST00000344726 OR14A2Q96R54 314 aa11.64□□□□□ -0.55
HMGN3-202ENST00000344726 TRBV5-7A0A0A0MS05 114 aa11.63□□□□□ -0.55
HMGN3-202ENST00000344726 A0A1W2PPK0 400 aa11.63□□□□□ -0.55
HMGN3-202ENST00000344726 FAM172BPA6NC97 362 aa11.63□□□□□ -0.55
HMGN3-202ENST00000344726 GPX5O75715 221 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms