RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 UBE2MP61081 183 aaKnown RBP14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 LSM11P83369 360 aaKnown RBP eCLIP14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 PDZK1IP1Q13113 114 aa14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 FAAP20Q6NZ36 180 aa14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 MOB3AQ96BX8 217 aa14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 LINC00470Q9BZP3 86 aa14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 OR2D2Q9H210 308 aa14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 TRDCB7Z8K6 153 aa14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 MRPS11P82912 194 aaKnown RBP14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 ETFRF1Q6IPR1 90 aa14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 TMEM65Q6PI78 240 aa14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 Q6ZT83 130 aa14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 CACNA1DQ01668 2161 aa14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 IGHV3-43A0A0B4J1X8 118 aa14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 FGF2P09038 288 aa14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 OR5G3P0C626 314 aa14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 IGHV3-43DP0DP04 118 aa14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 PSMB6P28072 239 aa14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 S100A11P31949 105 aa14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 TESK1Q15569 626 aa14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 CTF1Q16619 201 aa14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 ZNF529Q6P280 563 aa14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 NEIL1Q96FI4 390 aaPredicted RBP14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 CSAG2Q9Y5P2 127 aa14.28□□□□□ -0.12
SMARCA4-201ENST00000344626 NDUFA2O43678 99 aa14.27□□□□□ -0.12
SMARCA4-201ENST00000344626 ATP6V1G1O75348 118 aa14.27□□□□□ -0.12
SMARCA4-201ENST00000344626 TRAPPC2P0DI81 140 aa14.27□□□□□ -0.12
SMARCA4-201ENST00000344626 TRAPPC2BP0DI82 140 aa14.27□□□□□ -0.12
SMARCA4-201ENST00000344626 PSMB3P49720 205 aa14.27□□□□□ -0.12
SMARCA4-201ENST00000344626 MRPS18AQ9NVS2 196 aaKnown RBP14.27□□□□□ -0.12
SMARCA4-201ENST00000344626 IL36GQ9NZH8 169 aa14.27□□□□□ -0.12
SMARCA4-201ENST00000344626 SLC25A10Q9UBX3 287 aaPredicted RBP14.27□□□□□ -0.12
SMARCA4-201ENST00000344626 NPIPB13A6NJU9 1138 aa14.27□□□□□ -0.12
SMARCA4-201ENST00000344626 NPIPB4C9JG80 1138 aa14.27□□□□□ -0.12
SMARCA4-201ENST00000344626 ZIC2O95409 532 aaPredicted RBP14.27□□□□□ -0.12
SMARCA4-201ENST00000344626 IAPPP10997 89 aa14.27□□□□□ -0.12
SMARCA4-201ENST00000344626 TEX30Q5JUR7 227 aa14.27□□□□□ -0.12
SMARCA4-201ENST00000344626 C17orf107Q6ZR85 190 aa14.27□□□□□ -0.12
SMARCA4-201ENST00000344626 NFAM1Q8NET5 270 aaPredicted RBP14.27□□□□□ -0.12
SMARCA4-201ENST00000344626 ZNF230Q9UIE0 474 aaPredicted RBP14.27□□□□□ -0.12
SMARCA4-201ENST00000344626 WIPI2Q9Y4P8 454 aa14.27□□□□□ -0.12
SMARCA4-201ENST00000344626 TGFBR3LH3BV60 316 aa14.27□□□□□ -0.13
SMARCA4-201ENST00000344626 TMEM11P17152 192 aa14.27□□□□□ -0.13
SMARCA4-201ENST00000344626 TGM1P22735 817 aa14.27□□□□□ -0.13
SMARCA4-201ENST00000344626 CEACAM21Q3KPI0 293 aa14.27□□□□□ -0.13
SMARCA4-201ENST00000344626 OR2G3Q8NGZ4 309 aa14.27□□□□□ -0.13
SMARCA4-201ENST00000344626 FLVCR1-AS1Q8TAF5 88 aa14.27□□□□□ -0.13
SMARCA4-201ENST00000344626 K7ENP7 123 aa14.27□□□□□ -0.13
SMARCA4-201ENST00000344626 MBP02144 154 aa14.27□□□□□ -0.13
SMARCA4-201ENST00000344626 C1QCP02747 245 aa14.27□□□□□ -0.13
SMARCA4-201ENST00000344626 ZNF14P17017 642 aaPredicted RBP14.27□□□□□ -0.13
SMARCA4-201ENST00000344626 XAF1Q6GPH4 301 aa14.27□□□□□ -0.13
SMARCA4-201ENST00000344626 CCDC144NLQ6NUI1 221 aa14.27□□□□□ -0.13
SMARCA4-201ENST00000344626 OR5AP2Q8NGF4 316 aa14.27□□□□□ -0.13
SMARCA4-201ENST00000344626 MTFP1Q9UDX5 166 aa14.27□□□□□ -0.13
SMARCA4-201ENST00000344626 CYB5R1Q9UHQ9 305 aa14.27□□□□□ -0.13
SMARCA4-201ENST00000344626 OR5H1A6NKK0 313 aa14.26□□□□□ -0.13
SMARCA4-201ENST00000344626 KRASP01116 189 aa14.26□□□□□ -0.13
SMARCA4-201ENST00000344626 SNRPNP63162 240 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-201ENST00000344626 DPF1Q92782 380 aa14.26□□□□□ -0.13
SMARCA4-201ENST00000344626 SRRQ9GZT4 340 aa14.26□□□□□ -0.13
SMARCA4-201ENST00000344626 JTBO76095 146 aa14.26□□□□□ -0.13
SMARCA4-201ENST00000344626 LPAR6P43657 344 aa14.26□□□□□ -0.13
SMARCA4-201ENST00000344626 PPT1P50897 306 aa14.26□□□□□ -0.13
SMARCA4-201ENST00000344626 DOLPP1Q86YN1 238 aa14.26□□□□□ -0.13
SMARCA4-201ENST00000344626 OR4S2Q8NH73 311 aa14.26□□□□□ -0.13
SMARCA4-201ENST00000344626 CLEC18AA5D8T8 446 aa14.26□□□□□ -0.13
SMARCA4-201ENST00000344626 MAGEB1P43366 347 aa14.26□□□□□ -0.13
SMARCA4-201ENST00000344626 ACOT6Q3I5F7 207 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-201ENST00000344626 CCDC28AQ8IWP9 274 aa14.26□□□□□ -0.13
SMARCA4-201ENST00000344626 ZFP62Q8NB50 900 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-201ENST00000344626 CLEC18CQ8NCF0 446 aa14.26□□□□□ -0.13
SMARCA4-201ENST00000344626 J3QW42 95 aa14.26□□□□□ -0.13
SMARCA4-201ENST00000344626 OR2F2O95006 317 aa14.26□□□□□ -0.13
SMARCA4-201ENST00000344626 OR2F1Q13607 317 aa14.26□□□□□ -0.13
SMARCA4-201ENST00000344626 TIMM23BQ5SRD1 257 aa14.26□□□□□ -0.13
SMARCA4-201ENST00000344626 FAM131CQ96AQ9 280 aa14.26□□□□□ -0.13
SMARCA4-201ENST00000344626 PRO3102Q9H379 93 aa14.26□□□□□ -0.13
SMARCA4-201ENST00000344626 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-201ENST00000344626 A0A1W2PN81 502 aa14.25□□□□□ -0.13
SMARCA4-201ENST00000344626 IGHMP01871 453 aa14.25□□□□□ -0.13
SMARCA4-201ENST00000344626 CHRNA7P36544 502 aa14.25□□□□□ -0.13
SMARCA4-201ENST00000344626 INSL4Q14641 139 aa14.25□□□□□ -0.13
SMARCA4-201ENST00000344626 RASL11BQ9BPW5 248 aa14.25□□□□□ -0.13
SMARCA4-201ENST00000344626 TAF9BQ9HBM6 251 aa14.25□□□□□ -0.13
SMARCA4-201ENST00000344626 CSPG4Q6UVK1 2322 aa14.25□□□□□ -0.13
SMARCA4-201ENST00000344626 IGHV3OR15-7A0A075B7D8 119 aa14.25□□□□□ -0.13
SMARCA4-201ENST00000344626 OR2V2Q96R30 315 aa14.25□□□□□ -0.13
SMARCA4-201ENST00000344626 TMED3Q9Y3Q3 217 aa14.25□□□□□ -0.13
SMARCA4-201ENST00000344626 ERVFRD-1P60508 538 aa14.25□□□□□ -0.13
SMARCA4-201ENST00000344626 ACSF3Q4G176 576 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-201ENST00000344626 SEBOXQ9HB31 216 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-201ENST00000344626 GEMIN2O14893 280 aaKnown RBP14.25□□□□□ -0.13
SMARCA4-201ENST00000344626 CD1AP06126 327 aa14.25□□□□□ -0.13
SMARCA4-201ENST00000344626 ZNF708P17019 499 aa14.25□□□□□ -0.13
SMARCA4-201ENST00000344626 ACKR3P25106 362 aa14.25□□□□□ -0.13
SMARCA4-201ENST00000344626 NAAAQ02083 359 aa14.25□□□□□ -0.13
SMARCA4-201ENST00000344626 KCNIP4Q6PIL6 250 aa14.25□□□□□ -0.13
SMARCA4-201ENST00000344626 B9A039 149 aa14.24□□□□□ -0.13
SMARCA4-201ENST00000344626 E9PLN8 166 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms