RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 ZNF823P16415 610 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 RPS27P42677 84 aaKnown RBP7.1□□□□□ -1.27
ATG4A-201ENST00000343524 ZNF133P52736 654 aaPredicted RBP7.1□□□□□ -1.27
ATG4A-201ENST00000343524 TAS2R30P59541 319 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 ARF6P62330 175 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 ZFP36L1Q07352 338 aaKnown RBP7.1□□□□□ -1.27
ATG4A-201ENST00000343524 TMEM187Q14656 261 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 PLAC9Q5JTB6 97 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 TXNDC8Q6A555 127 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 CNKSR3Q6P9H4 555 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 KLHL24Q6TFL4 600 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 GLIPR1L1Q6UWM5 242 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 ATG4DQ86TL0 474 aaPredicted RBP7.1□□□□□ -1.27
ATG4A-201ENST00000343524 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.1□□□□□ -1.27
ATG4A-201ENST00000343524 OR4D5Q8NGN0 318 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 OR2V1Q8NHB1 315 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 ARRDC3Q96B67 414 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 ZNF845Q96IR2 970 aaPredicted RBP7.1□□□□□ -1.27
ATG4A-201ENST00000343524 LRRC3BQ96PB8 259 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 ATP5SQ99766 215 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 SMIM7Q9BQ49 75 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 NICN1Q9BSH3 213 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 PARD6GQ9BYG4 376 aaPredicted RBP7.1□□□□□ -1.27
ATG4A-201ENST00000343524 R4GN57 208 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 OBSL1O75147 1896 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 ATG2AQ2TAZ0 1938 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 TRAV30A0A087WSZ9 112 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 DUXBA0A1W2PPF3 345 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 CBY3A6NI87 242 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 VENTXO95231 258 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 GPR75O95800 540 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 IFNA5P01569 189 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 STATHP02808 62 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 ESDP10768 282 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 CD99P14209 185 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 TCN2P20062 427 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 CEACAM8P31997 349 aaPredicted RBP7.09□□□□□ -1.27
ATG4A-201ENST00000343524 BMI1P35226 326 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 WASP42768 502 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 HNRNPA3P51991 378 aaKnown RBP7.09□□□□□ -1.27
ATG4A-201ENST00000343524 ERVS71-1P61550 626 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 RNF151Q2KHN1 245 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 MPV17LQ2QL34 196 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 TPTE2P1Q5T6R2 138 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 PET117Q6UWS5 81 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 TIPARPQ7Z3E1 657 aaKnown RBP7.09□□□□□ -1.27
ATG4A-201ENST00000343524 ZNF761Q86XN6 746 aaPredicted RBP7.09□□□□□ -1.27
ATG4A-201ENST00000343524 TMEM123Q8N131 208 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 IL22RA1Q8N6P7 574 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 OR5L1Q8NGL2 311 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 OR10S1Q8NGN2 331 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 OR2I1PQ8NGU4 316 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 TMEM37Q8WXS4 190 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 COX14Q96I36 57 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 ALKBH3Q96Q83 286 aaPredicted RBP7.09□□□□□ -1.27
ATG4A-201ENST00000343524 ST6GALNAC5Q9BVH7 336 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 CLEC1BQ9P126 229 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 CDC42EP3Q9UKI2 254 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 MRPS23Q9Y3D9 190 aaKnown RBP7.09□□□□□ -1.27
ATG4A-201ENST00000343524 COX11Q9Y6N1 276 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 IGLV1-36A0A0B4J1U3 117 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 IGHV2-70DA0A0C4DH43 119 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 OR6C6A6NF89 314 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 ZFP92A6NM28 416 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 CYSRT1A8MQ03 144 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 NPIPA2E9PIF3 369 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 K7ERU9 68 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 P2RY10O00398 339 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 SDCBPO00560 298 aaPredicted RBP7.09□□□□□ -1.27
ATG4A-201ENST00000343524 MSTNO14793 375 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 SOCS1O15524 211 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 YPEL1O60688 119 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 DDAH2O95865 285 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 MT-ATP6P00846 226 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 ZNF728P0DKX0 622 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 MDKP21741 143 aaPredicted RBP7.09□□□□□ -1.27
ATG4A-201ENST00000343524 DTYMKP23919 212 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 HOXC12P31275 282 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 NKX2-1P43699 371 aaPredicted RBP7.09□□□□□ -1.27
ATG4A-201ENST00000343524 PIGPP57054 158 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 RPL27P61353 136 aaKnown RBP7.09□□□□□ -1.27
ATG4A-201ENST00000343524 MAJINQ3KP22 176 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 ERN2Q76MJ5 926 aaKnown RBP7.09□□□□□ -1.27
ATG4A-201ENST00000343524 ZAR1Q86SH2 424 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 FAM89BQ8N5H3 189 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 OR2AJ1Q8NGZ0 328 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 RTN4IP1Q8WWV3 396 aaPredicted RBP7.09□□□□□ -1.27
ATG4A-201ENST00000343524 MBD3L1Q8WWY6 194 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 CTHRC1Q96CG8 243 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 ARHGAP5-AS1Q96IT6 56 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 YPEL2Q96QA6 119 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 RNF2Q99496 336 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 MACROD1Q9BQ69 325 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 PSMG3Q9BT73 122 aaPredicted RBP7.09□□□□□ -1.27
ATG4A-201ENST00000343524 CSTL1Q9H114 145 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 NECAP2Q9NVZ3 263 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 BET1LQ9NYM9 111 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 SH3BGRL2Q9UJC5 107 aa7.09□□□□□ -1.27
ATG4A-201ENST00000343524 A0A0A6YYD4 124 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 C4orf47A7E2U8 309 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms