RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 TMEM210A6NLX4 147 aa13.19□□□□□ -0.3
UBE3B-202ENST00000342494 CD200P41217 278 aa13.19□□□□□ -0.3
UBE3B-202ENST00000342494 TPPP2P59282 170 aa13.19□□□□□ -0.3
UBE3B-202ENST00000342494 PAFAH1B2P68402 229 aa13.19□□□□□ -0.3
UBE3B-202ENST00000342494 DHRS2Q13268 280 aa13.19□□□□□ -0.3
UBE3B-202ENST00000342494 OR4D10Q8NGI6 311 aa13.19□□□□□ -0.3
UBE3B-202ENST00000342494 TGIF2Q9GZN2 237 aa13.19□□□□□ -0.3
UBE3B-202ENST00000342494 MAP1LC3BQ9GZQ8 125 aa13.19□□□□□ -0.3
UBE3B-202ENST00000342494 STARD10Q9Y365 291 aa13.19□□□□□ -0.3
UBE3B-202ENST00000342494 TRBV23-1A0A0A0MS06 115 aa13.18□□□□□ -0.3
UBE3B-202ENST00000342494 ZAR1Q86SH2 424 aa13.18□□□□□ -0.3
UBE3B-202ENST00000342494 LPAR3Q9UBY5 353 aa13.18□□□□□ -0.3
UBE3B-202ENST00000342494 MUC20Q8N307 709 aaPredicted RBP13.18□□□□□ -0.3
UBE3B-202ENST00000342494 CCL8P80075 99 aa13.18□□□□□ -0.3
UBE3B-202ENST00000342494 MMDQ15546 238 aa13.18□□□□□ -0.3
UBE3B-202ENST00000342494 ATP6V1FQ16864 119 aa13.18□□□□□ -0.3
UBE3B-202ENST00000342494 OR1L1Q8NH94 360 aa13.18□□□□□ -0.3
UBE3B-202ENST00000342494 ZNF721Q8TF20 911 aa13.18□□□□□ -0.3
UBE3B-202ENST00000342494 HARBI1Q96MB7 349 aa13.18□□□□□ -0.3
UBE3B-202ENST00000342494 SLC25A10Q9UBX3 287 aaPredicted RBP13.18□□□□□ -0.3
UBE3B-202ENST00000342494 RABAC1Q9UI14 185 aa13.18□□□□□ -0.3
UBE3B-202ENST00000342494 RPS4XP62701 263 aaKnown RBP13.18□□□□□ -0.3
UBE3B-202ENST00000342494 UBE2L3P68036 154 aaKnown RBP13.18□□□□□ -0.3
UBE3B-202ENST00000342494 OR2C3Q8N628 320 aa13.18□□□□□ -0.3
UBE3B-202ENST00000342494 Q8WTZ3 238 aa13.18□□□□□ -0.3
UBE3B-202ENST00000342494 RHOFQ9HBH0 211 aa13.18□□□□□ -0.3
UBE3B-202ENST00000342494 C9orf170A2RU37 121 aa13.18□□□□□ -0.3
UBE3B-202ENST00000342494 CPN1P15169 458 aa13.18□□□□□ -0.3
UBE3B-202ENST00000342494 ACP1P24666 158 aa13.18□□□□□ -0.3
UBE3B-202ENST00000342494 CRYBB2P43320 205 aa13.18□□□□□ -0.3
UBE3B-202ENST00000342494 CDC20Q12834 499 aa13.18□□□□□ -0.3
UBE3B-202ENST00000342494 RAB32Q13637 225 aa13.18□□□□□ -0.3
UBE3B-202ENST00000342494 GVQW1Q8N7I0 195 aa13.18□□□□□ -0.3
UBE3B-202ENST00000342494 OR5A2Q8NGI9 324 aa13.18□□□□□ -0.3
UBE3B-202ENST00000342494 ANXA10Q9UJ72 324 aa13.18□□□□□ -0.3
UBE3B-202ENST00000342494 FOXL2P58012 376 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 MIDNQ504T8 468 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 RBPMS2Q6ZRY4 209 aaKnown RBP13.17□□□□□ -0.3
UBE3B-202ENST00000342494 PDPNQ86YL7 162 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 DIRC2Q96SL1 478 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 RNF2Q99496 336 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 OPN3Q9H1Y3 402 aaPredicted RBP13.17□□□□□ -0.3
UBE3B-202ENST00000342494 PCDHGA9Q9Y5G4 932 aaKnown RBP13.17□□□□□ -0.3
UBE3B-202ENST00000342494 NTN1O95631 604 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 STARD6P59095 220 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 KRTDAPP60985 99 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 TBC1D26Q86UD7 250 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 ZNF429Q86V71 674 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 OR10A7Q8NGE5 316 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 OR2J1Q9GZK6 312 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 AKIP1Q9NQ31 210 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 LAMA4Q16363 1823 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 STRCQ7RTU9 1775 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 CDK2AP1O14519 115 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 PEBP1P30086 187 aaKnown RBP13.17□□□□□ -0.3
UBE3B-202ENST00000342494 RPL31P62899 125 aaKnown RBP13.17□□□□□ -0.3
UBE3B-202ENST00000342494 OR10G4Q8NGN3 311 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 OR10G9Q8NGN4 311 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 OR10G7Q8NGN6 311 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 TMEM18Q96B42 140 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 PIPOXQ9P0Z9 390 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 SUMO1P63165 101 aaKnown RBP13.17□□□□□ -0.3
UBE3B-202ENST00000342494 LSM11P83369 360 aaKnown RBP eCLIP13.17□□□□□ -0.3
UBE3B-202ENST00000342494 IL13RA2Q14627 380 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 COL13A1Q5TAT6 717 aaPredicted RBP13.17□□□□□ -0.3
UBE3B-202ENST00000342494 FAM214BQ7L5A3 538 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 TMEM251Q8N6I4 163 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 DUSP18Q8NEJ0 188 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 CHODLQ9H9P2 273 aa13.17□□□□□ -0.3
UBE3B-202ENST00000342494 GATCO43716 136 aaKnown RBP13.16□□□□□ -0.3
UBE3B-202ENST00000342494 BGLAPP02818 100 aa13.16□□□□□ -0.3
UBE3B-202ENST00000342494 RPL30P62888 115 aaKnown RBP13.16□□□□□ -0.3
UBE3B-202ENST00000342494 OR8I2Q8N0Y5 310 aa13.16□□□□□ -0.3
UBE3B-202ENST00000342494 RBM14Q96PK6 669 aaKnown RBP13.16□□□□□ -0.3
UBE3B-202ENST00000342494 P2RY6Q15077 328 aa13.16□□□□□ -0.3
UBE3B-202ENST00000342494 CTF1Q16619 201 aa13.16□□□□□ -0.3
UBE3B-202ENST00000342494 UFC1Q9Y3C8 167 aa13.16□□□□□ -0.3
UBE3B-202ENST00000342494 MPV17LQ2QL34 196 aa13.16□□□□□ -0.3
UBE3B-202ENST00000342494 TUSC1Q2TAM9 212 aa13.16□□□□□ -0.3
UBE3B-202ENST00000342494 TSPO2Q5TGU0 170 aa13.16□□□□□ -0.3
UBE3B-202ENST00000342494 SLC22A18ASQ8N1D0 253 aa13.16□□□□□ -0.3
UBE3B-202ENST00000342494 TEX29Q8N6K0 151 aa13.16□□□□□ -0.3
UBE3B-202ENST00000342494 ZNF385AQ96PM9 386 aaKnown RBP13.16□□□□□ -0.3
UBE3B-202ENST00000342494 AHRRA9YTQ3 701 aa13.16□□□□□ -0.3
UBE3B-202ENST00000342494 J3KRW8 73 aa13.16□□□□□ -0.3
UBE3B-202ENST00000342494 GSTZ1O43708 216 aaPredicted RBP13.16□□□□□ -0.3
UBE3B-202ENST00000342494 ADAMTS17Q8TE56 1095 aa13.16□□□□□ -0.3
UBE3B-202ENST00000342494 SF3B6Q9Y3B4 125 aaKnown RBP13.16□□□□□ -0.3
UBE3B-202ENST00000342494 SPINK4O60575 86 aa13.16□□□□□ -0.3
UBE3B-202ENST00000342494 HTR1DP28221 377 aa13.16□□□□□ -0.3
UBE3B-202ENST00000342494 WFDC3Q8IUB2 231 aa13.16□□□□□ -0.3
UBE3B-202ENST00000342494 IGHV1-45A0A0A0MS14 117 aa13.15□□□□□ -0.3
UBE3B-202ENST00000342494 PRSS44E7EML9 344 aa13.15□□□□□ -0.3
UBE3B-202ENST00000342494 ADRA2AP08913 450 aa13.15□□□□□ -0.3
UBE3B-202ENST00000342494 GZMKP49863 264 aa13.15□□□□□ -0.3
UBE3B-202ENST00000342494 GUK1Q16774 197 aa13.15□□□□□ -0.3
UBE3B-202ENST00000342494 C19orf48Q6RUI8 117 aa13.15□□□□□ -0.3
UBE3B-202ENST00000342494 COMMD1Q8N668 190 aa13.15□□□□□ -0.3
UBE3B-202ENST00000342494 ZNF680Q8NEM1 530 aa13.15□□□□□ -0.3
UBE3B-202ENST00000342494 PILRBQ9UKJ0 227 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms