RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 MPPED1O15442 326 aa12.52□□□□□ -0.41
TDP2-201ENST00000341060 OR8U9P0C7N5 309 aa12.52□□□□□ -0.41
TDP2-201ENST00000341060 SPP1P10451 314 aa12.52□□□□□ -0.41
TDP2-201ENST00000341060 COX5BP10606 129 aa12.52□□□□□ -0.41
TDP2-201ENST00000341060 BCL3P20749 454 aa12.52□□□□□ -0.41
TDP2-201ENST00000341060 CD80P33681 288 aa12.52□□□□□ -0.41
TDP2-201ENST00000341060 SRPXP78539 464 aa12.52□□□□□ -0.41
TDP2-201ENST00000341060 PRDX4Q13162 271 aa12.52□□□□□ -0.41
TDP2-201ENST00000341060 DBX2Q6ZNG2 339 aa12.52□□□□□ -0.41
TDP2-201ENST00000341060 SAXO1Q8IYX7 474 aa12.52□□□□□ -0.41
TDP2-201ENST00000341060 BATF2Q8N1L9 274 aa12.52□□□□□ -0.41
TDP2-201ENST00000341060 OR4D5Q8NGN0 318 aa12.52□□□□□ -0.41
TDP2-201ENST00000341060 OR8U1Q8NH10 309 aa12.52□□□□□ -0.41
TDP2-201ENST00000341060 BSCL2Q96G97 398 aaPredicted RBP12.52□□□□□ -0.41
TDP2-201ENST00000341060 SIGLEC12Q96PQ1 595 aa12.52□□□□□ -0.41
TDP2-201ENST00000341060 ZNF318Q5VUA4 2279 aa12.52□□□□□ -0.41
TDP2-201ENST00000341060 A0A096LPE4 126 aa12.51□□□□□ -0.41
TDP2-201ENST00000341060 C3orf85A0A1B0GTC6 90 aa12.51□□□□□ -0.41
TDP2-201ENST00000341060 A0A1W2PPZ6 126 aa12.51□□□□□ -0.41
TDP2-201ENST00000341060 LNP1A1A4G5 178 aa12.51□□□□□ -0.41
TDP2-201ENST00000341060 CELA3AP09093 270 aa12.51□□□□□ -0.41
TDP2-201ENST00000341060 DANCRP0C864 163 aa12.51□□□□□ -0.41
TDP2-201ENST00000341060 CCNOP22674 350 aa12.51□□□□□ -0.41
TDP2-201ENST00000341060 RFC3P40938 356 aa12.51□□□□□ -0.41
TDP2-201ENST00000341060 HAAOP46952 286 aa12.51□□□□□ -0.41
TDP2-201ENST00000341060 FGF12P61328 243 aa12.51□□□□□ -0.41
TDP2-201ENST00000341060 SRYQ05066 204 aa12.51□□□□□ -0.41
TDP2-201ENST00000341060 CEACAM21Q3KPI0 293 aa12.51□□□□□ -0.41
TDP2-201ENST00000341060 TUSC5Q8IXB3 177 aa12.51□□□□□ -0.41
TDP2-201ENST00000341060 DMBX1Q8NFW5 382 aa12.51□□□□□ -0.41
TDP2-201ENST00000341060 OR10Z1Q8NGY1 313 aa12.51□□□□□ -0.41
TDP2-201ENST00000341060 SLAMF9Q96A28 289 aa12.51□□□□□ -0.41
TDP2-201ENST00000341060 KIRREL1Q96J84 757 aa12.51□□□□□ -0.41
TDP2-201ENST00000341060 FGF23Q9GZV9 251 aaPredicted RBP12.51□□□□□ -0.41
TDP2-201ENST00000341060 TMEM222Q9H0R3 208 aa12.51□□□□□ -0.41
TDP2-201ENST00000341060 WFDC1Q9HC57 220 aa12.51□□□□□ -0.41
TDP2-201ENST00000341060 AHCTF1Q8WYP5 2266 aa12.51□□□□□ -0.41
TDP2-201ENST00000341060 C5orf49A4QMS7 147 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 C9JQL5 133 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 PRSS44E7EML9 344 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 SS18L1O75177 396 aaPredicted RBP12.5□□□□□ -0.41
TDP2-201ENST00000341060 CDS2O95674 445 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 NAPSAO96009 420 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 HLA-HP01893 362 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 GLAP06280 429 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 ZNF883P0CG24 379 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 GNRHRP30968 328 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 GPM6AP51674 278 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 FAM76BQ5HYJ3 339 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 C9orf135Q5VTT2 229 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 APOBEC3DQ96AK3 386 aaPredicted RBP12.5□□□□□ -0.41
TDP2-201ENST00000341060 MLXQ9UH92 298 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 RCL1Q9Y2P8 373 aaKnown RBP12.5□□□□□ -0.41
TDP2-201ENST00000341060 CUL9Q8IWT3 2517 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 DOCK7Q96N67 2140 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 MED13Q9UHV7 2174 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 C9orf172C9J069 976 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 JMJD7P0C870 316 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 KCNJ3P48549 501 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 ABHD17BQ5VST6 288 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 MEX3BQ6ZN04 569 aaKnown RBP12.5□□□□□ -0.41
TDP2-201ENST00000341060 MRPL21Q7Z2W9 205 aaKnown RBP12.5□□□□□ -0.41
TDP2-201ENST00000341060 ZDHHC23Q8IYP9 409 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 COMMD1Q8N668 190 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 Q9N2K0 584 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 CRIM1Q9NZV1 1036 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 LUZP4Q9P127 313 aa12.5□□□□□ -0.41
TDP2-201ENST00000341060 KLF2Q9Y5W3 355 aaPredicted RBP12.5□□□□□ -0.41
TDP2-201ENST00000341060 ZNF503-AS2A6NEH8 195 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 TSPAN15O95858 294 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 CCL2P13500 99 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 NFYBP25208 207 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 SNCAP37840 140 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 UCP2P55851 309 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 RND3P61587 244 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 GNMTQ14749 295 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 MPV17LQ2QL34 196 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 DPPA2Q7Z7J5 298 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 TMEM56Q96MV1 263 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 USB1Q9BQ65 265 aaKnown RBP12.49□□□□□ -0.41
TDP2-201ENST00000341060 HES7Q9BYE0 225 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 TTTY12Q9BZ98 90 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 PRRG4Q9BZD6 226 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 CALHM2Q9HA72 323 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 TMEM56-RWDD3S4R434 201 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 CELSR3Q9NYQ7 3312 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 EP300Q09472 2414 aaPredicted RBP12.49□□□□□ -0.41
TDP2-201ENST00000341060 TRDCB7Z8K6 153 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 SYNGR4O95473 234 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 TK1P04183 234 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 MAGEA5P43359 124 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 NOVA1P51513 510 aaKnown RBP12.49□□□□□ -0.41
TDP2-201ENST00000341060 FOXG1P55316 489 aaPredicted RBP12.49□□□□□ -0.41
TDP2-201ENST00000341060 NHLH2Q02577 135 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 MIDNQ504T8 468 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 PLA2G2CQ5R387 149 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 BOD1Q96IK1 185 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 LOXL4Q96JB6 756 aa12.49□□□□□ -0.41
TDP2-201ENST00000341060 PARP12Q9H0J9 701 aaKnown RBP12.49□□□□□ -0.41
TDP2-201ENST00000341060 MTCH1Q9NZJ7 389 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms