RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 RSRP1Q9BUV0 290 aa13.58□□□□□ -0.24
CCDC144A-202ENST00000340621 BARX1Q9HBU1 254 aaPredicted RBP13.58□□□□□ -0.24
CCDC144A-202ENST00000340621 DSPP15924 2871 aaKnown RBP13.57□□□□□ -0.24
CCDC144A-202ENST00000340621 TNRC6AQ8NDV7 1962 aaKnown RBP13.57□□□□□ -0.24
CCDC144A-202ENST00000340621 HS3ST1O14792 307 aa13.57□□□□□ -0.24
CCDC144A-202ENST00000340621 FGF2P09038 288 aa13.57□□□□□ -0.24
CCDC144A-202ENST00000340621 NUP62P37198 522 aaPredicted RBP13.57□□□□□ -0.24
CCDC144A-202ENST00000340621 HERV-K104P61576 105 aa13.57□□□□□ -0.24
CCDC144A-202ENST00000340621 PPP1CBP62140 327 aa13.57□□□□□ -0.24
CCDC144A-202ENST00000340621 MRPL49Q13405 166 aaKnown RBP13.57□□□□□ -0.24
CCDC144A-202ENST00000340621 SRSF7Q16629 238 aaKnown RBP eCLIP13.57□□□□□ -0.24
CCDC144A-202ENST00000340621 VWA1Q6PCB0 445 aa13.57□□□□□ -0.24
CCDC144A-202ENST00000340621 LYZL2Q7Z4W2 148 aa13.57□□□□□ -0.24
CCDC144A-202ENST00000340621 FAM58AQ8N1B3 248 aa13.57□□□□□ -0.24
CCDC144A-202ENST00000340621 STOML3Q8TAV4 291 aa13.57□□□□□ -0.24
CCDC144A-202ENST00000340621 GLYATL2Q8WU03 294 aa13.57□□□□□ -0.24
CCDC144A-202ENST00000340621 CNTNAP3BQ96NU0 1288 aa13.57□□□□□ -0.24
CCDC144A-202ENST00000340621 CNTNAP3Q9BZ76 1288 aa13.57□□□□□ -0.24
CCDC144A-202ENST00000340621 PLK3Q9H4B4 646 aa13.57□□□□□ -0.24
CCDC144A-202ENST00000340621 MED12LQ86YW9 2145 aa13.57□□□□□ -0.24
CCDC144A-202ENST00000340621 BET1O15155 118 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 PET100P0DJ07 73 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 ALKBH6Q3KRA9 238 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 C20orf204Q6ZNR8 217 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 CCDC36Q8IYA8 594 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 BVESQ8NE79 360 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 SYT3Q9BQG1 590 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 SHARPINQ9H0F6 387 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 CDH20Q9HBT6 801 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 TUBD1Q9UJT1 453 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 TRAV24A0A0B4J272 114 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 GNRHRP30968 328 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 FOXF2Q12947 444 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 HERPUD1Q15011 391 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 TUSC1Q2TAM9 212 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 WDR86Q86TI4 376 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 BAP18Q8IXM2 172 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 RDH5Q92781 318 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 SARAFQ96BY9 339 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 MSI2Q96DH6 328 aaKnown RBP13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 TAAR6Q96RI8 345 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 SUCNR1Q9BXA5 334 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 PKIBQ9C010 78 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 DNAJB11Q9UBS4 358 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 TMA7Q9Y2S6 64 aaKnown RBP13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 SHANK1Q9Y566 2161 aa13.56□□□□□ -0.24
CCDC144A-202ENST00000340621 J3QW42 95 aa13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 CEACAM4O75871 244 aa13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 AGFG2O95081 481 aa13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 NOVA1P51513 510 aaKnown RBP13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 UCP2P55851 309 aa13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 INO80CQ6PI98 192 aaPredicted RBP13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 LIAT1Q6ZQX7 453 aa13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 HSD17B13Q7Z5P4 300 aaPredicted RBP13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 LRTM2Q8N967 370 aa13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 PRSS33Q8NF86 280 aa13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 C18orf12Q96KH6 178 aa13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 SESN1Q9Y6P5 492 aa13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 ZFHX2Q9C0A1 2572 aaPredicted RBP13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 IGKV1-6A0A0C4DH72 117 aa13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 TRDCB7Z8K6 153 aa13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 TK1P04183 234 aa13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 HKR1P10072 659 aa13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 TPT1P13693 172 aaKnown RBP13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 ZP3P21754 424 aa13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 NAAAQ02083 359 aa13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 FAM76BQ5HYJ3 339 aa13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 ZNF585AQ6P3V2 769 aa13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 LINC00596Q86U02 117 aa13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 EIF4E3Q8N5X7 224 aaKnown RBP13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 SLC25A40Q8TBP6 338 aa13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 WNT2BQ93097 391 aa13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 TP53RKQ96S44 253 aa13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 SLC5A7Q9GZV3 580 aa13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 SPACA1Q9HBV2 294 aa13.55□□□□□ -0.24
CCDC144A-202ENST00000340621 ZNF891A8MT65 544 aaPredicted RBP13.54□□□□□ -0.24
CCDC144A-202ENST00000340621 J3QT63 122 aa13.54□□□□□ -0.24
CCDC144A-202ENST00000340621 MPPED1O15442 326 aa13.54□□□□□ -0.24
CCDC144A-202ENST00000340621 PHF1O43189 567 aaPredicted RBP13.54□□□□□ -0.24
CCDC144A-202ENST00000340621 DEDDO75618 318 aa13.54□□□□□ -0.24
CCDC144A-202ENST00000340621 KCNJ3P48549 501 aa13.54□□□□□ -0.24
CCDC144A-202ENST00000340621 OR2A2Q6IF42 318 aa13.54□□□□□ -0.24
CCDC144A-202ENST00000340621 WDR31Q8NA23 367 aa13.54□□□□□ -0.24
CCDC144A-202ENST00000340621 OR1J1Q8NGS3 322 aa13.54□□□□□ -0.24
CCDC144A-202ENST00000340621 LHFPL5Q8TAF8 219 aa13.54□□□□□ -0.24
CCDC144A-202ENST00000340621 MRPL30Q8TCC3 161 aaKnown RBP13.54□□□□□ -0.24
CCDC144A-202ENST00000340621 RTL8AQ9BWD3 113 aa13.54□□□□□ -0.24
CCDC144A-202ENST00000340621 ATP23Q9Y6H3 246 aa13.54□□□□□ -0.24
CCDC144A-202ENST00000340621 IGHV3-64DA0A0J9YX35 117 aa13.54□□□□□ -0.24
CCDC144A-202ENST00000340621 PRR33A8MZF0 331 aa13.54□□□□□ -0.24
CCDC144A-202ENST00000340621 SLC34A2O95436 690 aa13.54□□□□□ -0.24
CCDC144A-202ENST00000340621 CNOT4O95628 575 aaKnown RBP13.54□□□□□ -0.24
CCDC144A-202ENST00000340621 DIRAS3O95661 229 aa13.54□□□□□ -0.24
CCDC144A-202ENST00000340621 PSG7Q13046 419 aa13.54□□□□□ -0.24
CCDC144A-202ENST00000340621 SCCPDHQ8NBX0 429 aa13.54□□□□□ -0.24
CCDC144A-202ENST00000340621 GTF3AQ92664 365 aaKnown RBP13.54□□□□□ -0.24
CCDC144A-202ENST00000340621 DLL3Q9NYJ7 618 aa13.54□□□□□ -0.24
CCDC144A-202ENST00000340621 LSM5Q9Y4Y9 91 aaKnown RBP13.54□□□□□ -0.24
CCDC144A-202ENST00000340621 KIR2DS1A0A191URI9 304 aa13.53□□□□□ -0.24
CCDC144A-202ENST00000340621 H7C1Q1 480 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms