RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 OR2C3Q8N628 320 aa12.46□□□□□ -0.42
CPSF7-201ENST00000340437 ABHD3Q8WU67 409 aa12.46□□□□□ -0.42
CPSF7-201ENST00000340437 HS3ST6Q96QI5 342 aa12.46□□□□□ -0.42
CPSF7-201ENST00000340437 CUL9Q8IWT3 2517 aa12.46□□□□□ -0.42
CPSF7-201ENST00000340437 H0YL77 283 aa12.46□□□□□ -0.42
CPSF7-201ENST00000340437 HLA-HP01893 362 aa12.46□□□□□ -0.42
CPSF7-201ENST00000340437 SCTP09683 121 aa12.46□□□□□ -0.42
CPSF7-201ENST00000340437 LIFP15018 202 aa12.46□□□□□ -0.42
CPSF7-201ENST00000340437 RBM7Q9Y580 266 aaKnown RBP12.46□□□□□ -0.42
CPSF7-201ENST00000340437 MUC3AQ02505 3323 aa12.45□□□□□ -0.42
CPSF7-201ENST00000340437 H7C1Q1 480 aa12.45□□□□□ -0.42
CPSF7-201ENST00000340437 PPYP01298 95 aa12.45□□□□□ -0.42
CPSF7-201ENST00000340437 RFPL3SP0C7P2 107 aa12.45□□□□□ -0.42
CPSF7-201ENST00000340437 HAAOP46952 286 aa12.45□□□□□ -0.42
CPSF7-201ENST00000340437 GPM6AP51674 278 aa12.45□□□□□ -0.42
CPSF7-201ENST00000340437 UBE2KP61086 200 aa12.45□□□□□ -0.42
CPSF7-201ENST00000340437 KIAA0141Q14154 515 aaPredicted RBP12.45□□□□□ -0.42
CPSF7-201ENST00000340437 PCOLCEQ15113 449 aa12.45□□□□□ -0.42
CPSF7-201ENST00000340437 LYSMD4Q5XG99 296 aa12.45□□□□□ -0.42
CPSF7-201ENST00000340437 RTL6Q6ICC9 239 aa12.45□□□□□ -0.42
CPSF7-201ENST00000340437 TBC1D26Q86UD7 250 aa12.45□□□□□ -0.42
CPSF7-201ENST00000340437 HLA-CQ95604 372 aa12.45□□□□□ -0.42
CPSF7-201ENST00000340437 PRRG4Q9BZD6 226 aa12.45□□□□□ -0.42
CPSF7-201ENST00000340437 DSCR4P56555 118 aaPredicted RBP12.45□□□□□ -0.42
CPSF7-201ENST00000340437 ZNF154Q13106 437 aa12.45□□□□□ -0.42
CPSF7-201ENST00000340437 C4orf17Q53FE4 359 aa12.45□□□□□ -0.42
CPSF7-201ENST00000340437 TCEAL6Q6IPX3 200 aa12.45□□□□□ -0.42
CPSF7-201ENST00000340437 ADPRHL1Q8NDY3 354 aa12.45□□□□□ -0.42
CPSF7-201ENST00000340437 RDH5Q92781 318 aa12.45□□□□□ -0.42
CPSF7-201ENST00000340437 NTNG2Q96CW9 530 aa12.45□□□□□ -0.42
CPSF7-201ENST00000340437 ZNF488Q96MN9 340 aa12.45□□□□□ -0.42
CPSF7-201ENST00000340437 CADP27708 2225 aa12.45□□□□□ -0.42
CPSF7-201ENST00000340437 IGSF23A1L1A6 192 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 ZNF724A8MTY0 619 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 HEXAP06865 529 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 SEC11BP0C7V7 166 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 GAPTQ8N292 157 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 FADS6Q8N9I5 356 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 CCDC71LQ8N9Z2 235 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 EXTL1Q92935 676 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 FOXB1Q99853 325 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 GSN-AS1Q9NRJ2 163 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 STARD10Q9Y365 291 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 C9J4A7 227 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 FAM157AC9JC47 383 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 MPPED1O15442 326 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 ECI1P42126 302 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 DYNLT3P51808 116 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 H3F3AP84243 136 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 FAM27BQ5VT28 67 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 TMEM54Q969K7 222 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 SPSB1Q96BD6 273 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 MSI2Q96DH6 328 aaKnown RBP12.44□□□□□ -0.42
CPSF7-201ENST00000340437 SUCNR1Q9BXA5 334 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 COL4A2P08572 1712 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 C5orf52A6NGY3 159 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 CNOT4O95628 575 aaKnown RBP12.44□□□□□ -0.42
CPSF7-201ENST00000340437 P04436 131 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 MDKP21741 143 aaPredicted RBP12.44□□□□□ -0.42
CPSF7-201ENST00000340437 RAB35Q15286 201 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 DPPA2Q7Z7J5 298 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 CARFQ8N187 725 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 DMBX1Q8NFW5 382 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 OR1J1Q8NGS3 322 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 TCTEX1D2Q8WW35 142 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 CCL28Q9NRJ3 127 aa12.44□□□□□ -0.42
CPSF7-201ENST00000340437 TERTO14746 1132 aaKnown RBP12.43□□□□□ -0.42
CPSF7-201ENST00000340437 PDCD6O75340 191 aa12.43□□□□□ -0.42
CPSF7-201ENST00000340437 VAMP5O95183 116 aa12.43□□□□□ -0.42
CPSF7-201ENST00000340437 BCL3P20749 454 aa12.43□□□□□ -0.42
CPSF7-201ENST00000340437 HLA-BQ31612 363 aa12.43□□□□□ -0.42
CPSF7-201ENST00000340437 MAFAQ8NHW3 353 aaPredicted RBP12.43□□□□□ -0.42
CPSF7-201ENST00000340437 CPNE4Q96A23 557 aaPredicted RBP12.43□□□□□ -0.42
CPSF7-201ENST00000340437 ZFP92A6NM28 416 aa12.43□□□□□ -0.42
CPSF7-201ENST00000340437 EDN3P14138 238 aa12.43□□□□□ -0.42
CPSF7-201ENST00000340437 GDF1P27539 372 aa12.43□□□□□ -0.42
CPSF7-201ENST00000340437 SUCLG1P53597 346 aaKnown RBP12.43□□□□□ -0.42
CPSF7-201ENST00000340437 FAM209BQ5JX69 171 aa12.43□□□□□ -0.42
CPSF7-201ENST00000340437 LHFPL2Q6ZUX7 228 aa12.43□□□□□ -0.42
CPSF7-201ENST00000340437 CLN5O75503 358 aa12.43□□□□□ -0.42
CPSF7-201ENST00000340437 TK1P04183 234 aa12.43□□□□□ -0.42
CPSF7-201ENST00000340437 FUT3P21217 361 aa12.43□□□□□ -0.42
CPSF7-201ENST00000340437 TMEM267Q0VDI3 215 aaPredicted RBP12.43□□□□□ -0.42
CPSF7-201ENST00000340437 C10orf128Q5T292 105 aa12.43□□□□□ -0.42
CPSF7-201ENST00000340437 AKR1C8PQ5T2L2 129 aa12.43□□□□□ -0.42
CPSF7-201ENST00000340437 OR56B2PQ8NGI1 322 aa12.43□□□□□ -0.42
CPSF7-201ENST00000340437 IFI44Q8TCB0 444 aa12.43□□□□□ -0.42
CPSF7-201ENST00000340437 SYNGR3O43761 229 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 CHST1O43916 411 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 MRPS34P82930 218 aaKnown RBP12.42□□□□□ -0.42
CPSF7-201ENST00000340437 HMGN3Q15651 99 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 TRIM61Q5EBN2 209 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 C9orf152Q5JTZ5 239 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 ACER2Q5QJU3 275 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 HIST2H3AQ71DI3 136 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 THNSL2Q86YJ6 484 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 OR10D3Q8NH80 312 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 CALHM2Q9HA72 323 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 TMEM38BQ9NVV0 291 aa12.42□□□□□ -0.42
CPSF7-201ENST00000340437 HS3ST3B1Q9Y662 390 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms