RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 MPV17LQ2QL34 196 aa12.34□□□□□ -0.43
CSRP1-201ENST00000340006 MUC20Q8N307 709 aaPredicted RBP12.34□□□□□ -0.43
CSRP1-201ENST00000340006 BPIFB2Q8N4F0 458 aa12.34□□□□□ -0.43
CSRP1-201ENST00000340006 ASCC1Q8N9N2 400 aaKnown RBP12.34□□□□□ -0.43
CSRP1-201ENST00000340006 NEK7Q8TDX7 302 aa12.34□□□□□ -0.43
CSRP1-201ENST00000340006 SMIM4Q8WVI0 70 aa12.34□□□□□ -0.43
CSRP1-201ENST00000340006 MBD6Q96DN6 1003 aa12.34□□□□□ -0.43
CSRP1-201ENST00000340006 RAB3CQ96E17 227 aa12.34□□□□□ -0.43
CSRP1-201ENST00000340006 PIMREGQ9BSJ6 248 aa12.34□□□□□ -0.43
CSRP1-201ENST00000340006 ZNF665Q9H7R5 613 aa12.34□□□□□ -0.43
CSRP1-201ENST00000340006 ZMAT3Q9HA38 289 aaKnown RBP12.34□□□□□ -0.43
CSRP1-201ENST00000340006 ZNF581Q9P0T4 197 aa12.34□□□□□ -0.43
CSRP1-201ENST00000340006 FAM90A10PA6NDY2 464 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 FAM90A18PA6NE21 464 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 FAM90A16PA6NEW6 464 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 FAM90A20PA6NIJ5 464 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 FAM90A8PA6NJQ4 464 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 FAM90A7PA6NKC0 464 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 FAM90A22PA8MWA6 464 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 FAM90A12PA8MX19 464 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 FAM90A5PA8MXJ8 464 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 FAM90A23PA8MXZ1 464 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 MCRIP1C9JLW8 97 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 ADAM20O43506 726 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 IGHV2-70P01814 119 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 FAM90A15PP0C7V4 464 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 FAM90A13PP0C7W8 464 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 FAM90A14PP0C7W9 464 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 FAM90A24PP0C7X0 464 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 DSCR9P59020 149 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 MRPS10P82664 201 aaKnown RBP12.33□□□□□ -0.44
CSRP1-201ENST00000340006 CLEC12BQ2HXU8 276 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 STUMQ69YW2 141 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 Q6P435 159 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 SLC36A1Q7Z2H8 476 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 LRRC75A-AS1Q8N1F1 130 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 ZNRF1Q8ND25 227 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 TRIM63Q969Q1 353 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 MED30Q96HR3 178 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 AUNIPQ9H7T9 357 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 SPACA1Q9HBV2 294 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 BAHCC1Q9P281 2608 aa12.33□□□□□ -0.44
CSRP1-201ENST00000340006 DOCK11Q5JSL3 2073 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 NKX6-3A6NJ46 265 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 GABARAPH6UMI1 98 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 GSTZ1O43708 216 aaPredicted RBP12.32□□□□□ -0.44
CSRP1-201ENST00000340006 LANCL1O43813 399 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 CD3GP09693 182 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 GIFP27352 417 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 INPP1P49441 399 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 TMEM50BP56557 158 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 CDNFQ49AH0 187 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 LYPD2Q6UXB3 125 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 C6orf201Q7Z4U5 140 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 ZNF561Q8N587 486 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 POC5Q8NA72 575 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 SUMF2Q8NBJ7 301 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 ARHGAP5-AS1Q96IT6 56 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 FAAP24Q9BTP7 215 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 BPESC1Q9GZL8 116 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 ING3Q9NXR8 418 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 METRNQ9UJH8 293 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 TBC1D24Q9ULP9 559 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 NAV2Q8IVL1 2488 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 LINC00854A0A1B0GVQ3 168 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 UBE2QL1A1L167 161 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 NDUFS8O00217 210 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 PDCD6O75340 191 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 GNB3P16520 340 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 DEFA1P59665 94 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 DEFA3P59666 94 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 PAN3Q58A45 887 aaKnown RBP12.32□□□□□ -0.44
CSRP1-201ENST00000340006 ATPAF1Q5TC12 328 aaPredicted RBP12.32□□□□□ -0.44
CSRP1-201ENST00000340006 SIGIRRQ6IA17 410 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 DCDC5Q6ZRR9 648 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 SPICQ8N5J4 248 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 OR52I2Q8NH67 350 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 FCAMRQ8WWV6 532 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 NUDT16L1Q9BRJ7 211 aaKnown RBP12.32□□□□□ -0.44
CSRP1-201ENST00000340006 DPCDQ9BVM2 203 aaPredicted RBP12.32□□□□□ -0.44
CSRP1-201ENST00000340006 CHST6Q9GZX3 395 aa12.32□□□□□ -0.44
CSRP1-201ENST00000340006 TRAV24A0A0B4J272 114 aa12.31□□□□□ -0.44
CSRP1-201ENST00000340006 MEIOCA2RUB1 952 aa12.31□□□□□ -0.44
CSRP1-201ENST00000340006 SLC33A1O00400 549 aaPredicted RBP12.31□□□□□ -0.44
CSRP1-201ENST00000340006 FSTL3O95633 263 aa12.31□□□□□ -0.44
CSRP1-201ENST00000340006 IL13RA1P78552 427 aa12.31□□□□□ -0.44
CSRP1-201ENST00000340006 RBM39Q14498 530 aaKnown RBP12.31□□□□□ -0.44
CSRP1-201ENST00000340006 ZNF788Q6ZQV5 615 aa12.31□□□□□ -0.44
CSRP1-201ENST00000340006 TMEM185AQ8NFB2 350 aa12.31□□□□□ -0.44
CSRP1-201ENST00000340006 PPP1R35Q8TAP8 253 aa12.31□□□□□ -0.44
CSRP1-201ENST00000340006 C10orf105Q8TEF2 133 aa12.31□□□□□ -0.44
CSRP1-201ENST00000340006 CHPT1Q8WUD6 406 aa12.31□□□□□ -0.44
CSRP1-201ENST00000340006 PECRQ9BY49 303 aa12.31□□□□□ -0.44
CSRP1-201ENST00000340006 DNTTIP1Q9H147 329 aa12.31□□□□□ -0.44
CSRP1-201ENST00000340006 PPA2Q9H2U2 334 aa12.31□□□□□ -0.44
CSRP1-201ENST00000340006 MIOXQ9UGB7 285 aa12.31□□□□□ -0.44
CSRP1-201ENST00000340006 PDZD2O15018 2839 aa12.31□□□□□ -0.44
CSRP1-201ENST00000340006 CSMD1Q96PZ7 3565 aa12.31□□□□□ -0.44
CSRP1-201ENST00000340006 NDUFB3O43676 98 aa12.3□□□□□ -0.44
CSRP1-201ENST00000340006 PSPNO60542 156 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms