RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 ERVK11-1P61568 191 aa19.02■□□□□ 0.64
PDLIM2-203ENST00000339162 MITD1Q8WV92 249 aa19.02■□□□□ 0.64
PDLIM2-203ENST00000339162 TOMM40LQ969M1 308 aa19.02■□□□□ 0.64
PDLIM2-203ENST00000339162 NRIP2Q9BQI9 281 aa19.02■□□□□ 0.64
PDLIM2-203ENST00000339162 A6NLC8 198 aa19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 SIRPB1O00241 398 aa19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 DEGS1O15121 323 aa19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 PGA5P0DJD9 388 aa19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 PMELP40967 661 aa19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 FXYD4P59646 89 aa19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 LGALSLQ3ZCW2 172 aaPredicted RBP19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 C20orf204Q6ZNR8 217 aa19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 C11orf53Q8IXP5 236 aa19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 TMEM185AQ8NFB2 350 aa19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 PHB2Q99623 299 aa19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 DPCDQ9BVM2 203 aaPredicted RBP19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 PRSS44E7EML9 344 aa19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 WNT9BO14905 357 aa19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 NAPSAO96009 420 aa19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 TUBG1P23258 451 aa19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 FCGR2CP31995 323 aa19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 TAS2R31P59538 309 aa19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 SUPT4H1P63272 117 aaKnown RBP19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 SEC22AQ96IW7 307 aa19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 SYT3Q9BQG1 590 aa19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 CXXC4Q9H2H0 198 aa19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 TUBG2Q9NRH3 451 aa19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 SHANK1Q9Y566 2161 aa19.01■□□□□ 0.63
PDLIM2-203ENST00000339162 TMEM210A6NLX4 147 aa19■□□□□ 0.63
PDLIM2-203ENST00000339162 NFYAP23511 347 aaPredicted RBP19■□□□□ 0.63
PDLIM2-203ENST00000339162 RBPJQ06330 500 aa19■□□□□ 0.63
PDLIM2-203ENST00000339162 IL13RA2Q14627 380 aa19■□□□□ 0.63
PDLIM2-203ENST00000339162 Q6P435 159 aa19■□□□□ 0.63
PDLIM2-203ENST00000339162 CLEC18BQ6UXF7 455 aa19■□□□□ 0.63
PDLIM2-203ENST00000339162 SCGB3A2Q96PL1 93 aa19■□□□□ 0.63
PDLIM2-203ENST00000339162 FAM25EA8MYX2 175 aa19■□□□□ 0.63
PDLIM2-203ENST00000339162 DUS4LO95620 317 aaKnown RBP19■□□□□ 0.63
PDLIM2-203ENST00000339162 SCTP09683 121 aa19■□□□□ 0.63
PDLIM2-203ENST00000339162 CEBPDP49716 269 aaPredicted RBP19■□□□□ 0.63
PDLIM2-203ENST00000339162 DHODHQ02127 395 aa19■□□□□ 0.63
PDLIM2-203ENST00000339162 DHRS11Q6UWP2 260 aa19■□□□□ 0.63
PDLIM2-203ENST00000339162 LINC00596Q86U02 117 aa19■□□□□ 0.63
PDLIM2-203ENST00000339162 OR2Z1Q8NG97 314 aa19■□□□□ 0.63
PDLIM2-203ENST00000339162 Q9N2K0 584 aa19■□□□□ 0.63
PDLIM2-203ENST00000339162 ICE1Q9Y2F5 2266 aa18.99■□□□□ 0.63
PDLIM2-203ENST00000339162 TRGV8A0A0C4DH27 118 aa18.99■□□□□ 0.63
PDLIM2-203ENST00000339162 C16orf97H3BN30 126 aa18.99■□□□□ 0.63
PDLIM2-203ENST00000339162 OR2H2O95918 312 aa18.99■□□□□ 0.63
PDLIM2-203ENST00000339162 OR5M8Q8NGP6 311 aa18.99■□□□□ 0.63
PDLIM2-203ENST00000339162 SLA2Q9H6Q3 261 aa18.99■□□□□ 0.63
PDLIM2-203ENST00000339162 SPACA1Q9HBV2 294 aa18.99■□□□□ 0.63
PDLIM2-203ENST00000339162 OR14J1Q9UGF5 321 aa18.99■□□□□ 0.63
PDLIM2-203ENST00000339162 TUBD1Q9UJT1 453 aa18.99■□□□□ 0.63
PDLIM2-203ENST00000339162 ANKRD34BA5PLL1 514 aa18.98■□□□□ 0.63
PDLIM2-203ENST00000339162 PPP3CBP16298 524 aa18.98■□□□□ 0.63
PDLIM2-203ENST00000339162 C14orf166Q9Y224 244 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-203ENST00000339162 TFF1P04155 84 aa18.98■□□□□ 0.63
PDLIM2-203ENST00000339162 ZNF81P51508 661 aa18.98■□□□□ 0.63
PDLIM2-203ENST00000339162 NKX6-1P78426 367 aaPredicted RBP18.98■□□□□ 0.63
PDLIM2-203ENST00000339162 THOC7Q6I9Y2 204 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-203ENST00000339162 WFDC8Q8IUA0 241 aa18.98■□□□□ 0.63
PDLIM2-203ENST00000339162 Q8IYB0 196 aa18.98■□□□□ 0.63
PDLIM2-203ENST00000339162 PDCD10Q9BUL8 212 aa18.98■□□□□ 0.63
PDLIM2-203ENST00000339162 SPEF1Q9Y4P9 236 aa18.98■□□□□ 0.63
PDLIM2-203ENST00000339162 SMG1Q96Q15 3661 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-203ENST00000339162 TRAV39A0A0B4J263 110 aa18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 BET1O15155 118 aa18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 SFT2D2O95562 160 aa18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 CD40P25942 277 aa18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 ID4P47928 161 aa18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 SORDQ00796 357 aa18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 OR5T2Q8NGG2 359 aa18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 MRPL30Q8TCC3 161 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 NBEAQ8NFP9 2946 aa18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 hCG_1807616A0A1W2PRN6 198 aa18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 ATXN7O15265 892 aaPredicted RBP18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 TPD52L2O43399 206 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 SLC34A2O95436 690 aa18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 ZNF250P15622 560 aa18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 RPS2P15880 293 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 RCC1P18754 421 aaPredicted RBP18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 GLRXP35754 106 aa18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 SEC61A1P61619 476 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 SURF2Q15527 256 aaPredicted RBP18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 ANKRD55Q3KP44 614 aa18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 PAN3Q58A45 887 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 WDR82Q6UXN9 313 aa18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 C1orf174Q8IYL3 243 aa18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 TMEM171Q8WVE6 324 aa18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 RND1Q92730 232 aa18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 FXYD6Q9H0Q3 95 aa18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 ELOVL5Q9NYP7 299 aa18.97■□□□□ 0.63
PDLIM2-203ENST00000339162 ZSCAN5BA6NJL1 495 aa18.96■□□□□ 0.63
PDLIM2-203ENST00000339162 SLC33A1O00400 549 aaPredicted RBP18.96■□□□□ 0.63
PDLIM2-203ENST00000339162 LRRC37A5PQ49AS3 106 aa18.96■□□□□ 0.63
PDLIM2-203ENST00000339162 JKAMPQ9P055 326 aa18.96■□□□□ 0.63
PDLIM2-203ENST00000339162 NBASA2RRP1 2371 aa18.96■□□□□ 0.63
PDLIM2-203ENST00000339162 ZNF728P0DKX0 622 aa18.96■□□□□ 0.63
PDLIM2-203ENST00000339162 AADACP22760 399 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms