RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 NUDT19A8MXV4 375 aa11.31□□□□□ -0.6
COMMD4-202ENST00000338995 DEGS1O15121 323 aa11.31□□□□□ -0.6
COMMD4-202ENST00000338995 RPSAP08865 295 aaKnown RBP11.31□□□□□ -0.6
COMMD4-202ENST00000338995 CALCBP10092 127 aa11.31□□□□□ -0.6
COMMD4-202ENST00000338995 HOXD3P31249 432 aaPredicted RBP11.31□□□□□ -0.6
COMMD4-202ENST00000338995 MYCNOSP40205 109 aa11.31□□□□□ -0.6
COMMD4-202ENST00000338995 OR3A4PP47883 348 aa11.31□□□□□ -0.6
COMMD4-202ENST00000338995 GLIPR1P48060 266 aa11.31□□□□□ -0.6
COMMD4-202ENST00000338995 AESQ08117 197 aa11.31□□□□□ -0.6
COMMD4-202ENST00000338995 BNIP1Q12981 228 aa11.31□□□□□ -0.6
COMMD4-202ENST00000338995 SSX6Q7RTT6 188 aa11.31□□□□□ -0.6
COMMD4-202ENST00000338995 MRPL41Q8IXM3 137 aaKnown RBP11.31□□□□□ -0.6
COMMD4-202ENST00000338995 RDH10Q8IZV5 341 aa11.31□□□□□ -0.6
COMMD4-202ENST00000338995 LINC00482Q8N8I6 264 aa11.31□□□□□ -0.6
COMMD4-202ENST00000338995 OR9G1Q8NH87 305 aa11.31□□□□□ -0.6
COMMD4-202ENST00000338995 UTP4Q969X6 686 aaKnown RBP11.31□□□□□ -0.6
COMMD4-202ENST00000338995 FGGYQ96C11 551 aa11.31□□□□□ -0.6
COMMD4-202ENST00000338995 HRASLS5Q96KN8 279 aa11.31□□□□□ -0.6
COMMD4-202ENST00000338995 OPALINQ96PE5 141 aa11.31□□□□□ -0.6
COMMD4-202ENST00000338995 B9D2Q9BPU9 175 aa11.31□□□□□ -0.6
COMMD4-202ENST00000338995 IL36RNQ9UBH0 155 aa11.31□□□□□ -0.6
COMMD4-202ENST00000338995 POMPQ9Y244 141 aa11.31□□□□□ -0.6
COMMD4-202ENST00000338995 A0A087X0M5 115 aa11.3□□□□□ -0.6
COMMD4-202ENST00000338995 A0A1B0GX30 115 aa11.3□□□□□ -0.6
COMMD4-202ENST00000338995 M0R129 80 aa11.3□□□□□ -0.6
COMMD4-202ENST00000338995 MITFO75030 526 aaPredicted RBP11.3□□□□□ -0.6
COMMD4-202ENST00000338995 CSN2P05814 226 aa11.3□□□□□ -0.6
COMMD4-202ENST00000338995 NHLRC4P0CG21 123 aaPredicted RBP11.3□□□□□ -0.6
COMMD4-202ENST00000338995 NFYBP25208 207 aa11.3□□□□□ -0.6
COMMD4-202ENST00000338995 C21orf33P30042 268 aaPredicted RBP11.3□□□□□ -0.6
COMMD4-202ENST00000338995 HES1Q14469 280 aa11.3□□□□□ -0.6
COMMD4-202ENST00000338995 C11orf87Q6NUJ2 197 aa11.3□□□□□ -0.6
COMMD4-202ENST00000338995 SAXO1Q8IYX7 474 aa11.3□□□□□ -0.6
COMMD4-202ENST00000338995 PRSS35Q8N3Z0 413 aa11.3□□□□□ -0.6
COMMD4-202ENST00000338995 OR8J1Q8NGP2 316 aa11.3□□□□□ -0.6
COMMD4-202ENST00000338995 TOMM40LQ969M1 308 aa11.3□□□□□ -0.6
COMMD4-202ENST00000338995 ADAT3Q96EY9 351 aaPredicted RBP11.3□□□□□ -0.6
COMMD4-202ENST00000338995 MRPL48Q96GC5 212 aaKnown RBP11.3□□□□□ -0.6
COMMD4-202ENST00000338995 COMMD4Q9H0A8 199 aa11.3□□□□□ -0.6
COMMD4-202ENST00000338995 ZNF286AQ9HBT8 521 aa11.3□□□□□ -0.6
COMMD4-202ENST00000338995 KBTBD11-OT1A0A1B0GTJ5 212 aa11.29□□□□□ -0.6
COMMD4-202ENST00000338995 FAM172BPA6NC97 362 aa11.29□□□□□ -0.6
COMMD4-202ENST00000338995 LY6LH3BQJ8 138 aa11.29□□□□□ -0.6
COMMD4-202ENST00000338995 RAMP3O60896 148 aa11.29□□□□□ -0.6
COMMD4-202ENST00000338995 KDM4BO94953 1096 aa11.29□□□□□ -0.6
COMMD4-202ENST00000338995 AMY1AP04745 511 aa11.29□□□□□ -0.6
COMMD4-202ENST00000338995 AMY2AP04746 511 aa11.29□□□□□ -0.6
COMMD4-202ENST00000338995 ISG15P05161 165 aa11.29□□□□□ -0.6
COMMD4-202ENST00000338995 VSIG8P0DPA2 414 aa11.29□□□□□ -0.6
COMMD4-202ENST00000338995 DBTP11182 482 aaKnown RBP11.29□□□□□ -0.6
COMMD4-202ENST00000338995 FASP25445 335 aa11.29□□□□□ -0.6
COMMD4-202ENST00000338995 THBS3P49746 956 aa11.29□□□□□ -0.6
COMMD4-202ENST00000338995 RPL23AP62750 156 aaKnown RBP11.29□□□□□ -0.6
COMMD4-202ENST00000338995 KDM4DQ6B0I6 523 aa11.29□□□□□ -0.6
COMMD4-202ENST00000338995 ZNF329Q86UD4 541 aa11.29□□□□□ -0.6
COMMD4-202ENST00000338995 FOXRED2Q8IWF2 684 aa11.29□□□□□ -0.6
COMMD4-202ENST00000338995 OR2G2Q8NGZ5 317 aa11.29□□□□□ -0.6
COMMD4-202ENST00000338995 HAVCR2Q8TDQ0 301 aa11.29□□□□□ -0.6
COMMD4-202ENST00000338995 BARHL1Q9BZE3 327 aa11.29□□□□□ -0.6
COMMD4-202ENST00000338995 ING3Q9NXR8 418 aa11.29□□□□□ -0.6
COMMD4-202ENST00000338995 IGKV1-9A0A0C4DH69 117 aa11.28□□□□□ -0.6
COMMD4-202ENST00000338995 SH2D7A6NKC9 451 aaPredicted RBP11.28□□□□□ -0.6
COMMD4-202ENST00000338995 SERPINE3A8MV23 424 aa11.28□□□□□ -0.6
COMMD4-202ENST00000338995 FGF16O43320 207 aa11.28□□□□□ -0.6
COMMD4-202ENST00000338995 APOL3O95236 402 aa11.28□□□□□ -0.6
COMMD4-202ENST00000338995 MT-ND2P03891 347 aa11.28□□□□□ -0.6
COMMD4-202ENST00000338995 HTR1AP08908 422 aa11.28□□□□□ -0.6
COMMD4-202ENST00000338995 TMEM225BP0DP42 221 aa11.28□□□□□ -0.6
COMMD4-202ENST00000338995 TMEM11P17152 192 aa11.28□□□□□ -0.6
COMMD4-202ENST00000338995 EPHA2P29317 976 aa11.28□□□□□ -0.6
COMMD4-202ENST00000338995 RAB7AP51149 207 aa11.28□□□□□ -0.6
COMMD4-202ENST00000338995 DGCR2P98153 550 aa11.28□□□□□ -0.6
COMMD4-202ENST00000338995 MADCAM1Q13477 382 aa11.28□□□□□ -0.6
COMMD4-202ENST00000338995 ATP6AP1Q15904 470 aa11.28□□□□□ -0.6
COMMD4-202ENST00000338995 TP53I3Q53FA7 332 aa11.28□□□□□ -0.6
COMMD4-202ENST00000338995 C10orf99Q6UWK7 81 aa11.28□□□□□ -0.6
COMMD4-202ENST00000338995 BAIAP2L2Q6UXY1 529 aa11.28□□□□□ -0.6
COMMD4-202ENST00000338995 SLC16A12Q6ZSM3 486 aa11.28□□□□□ -0.6
COMMD4-202ENST00000338995 OR13C3Q8NGS6 347 aa11.28□□□□□ -0.6
COMMD4-202ENST00000338995 TRUB1Q8WWH5 349 aaKnown RBP11.28□□□□□ -0.6
COMMD4-202ENST00000338995 RFT1Q96AA3 541 aa11.28□□□□□ -0.6
COMMD4-202ENST00000338995 GON7Q9BXV9 100 aa11.28□□□□□ -0.6
COMMD4-202ENST00000338995 NCOR1P1Q9H4R4 102 aa11.28□□□□□ -0.6
COMMD4-202ENST00000338995 DAPL1A0PJW8 107 aa11.27□□□□□ -0.61
COMMD4-202ENST00000338995 FAM90A18PA6NE21 464 aa11.27□□□□□ -0.61
COMMD4-202ENST00000338995 FAM90A16PA6NEW6 464 aa11.27□□□□□ -0.61
COMMD4-202ENST00000338995 FAM90A20PA6NIJ5 464 aa11.27□□□□□ -0.61
COMMD4-202ENST00000338995 SNTNA6NMZ2 147 aa11.27□□□□□ -0.61
COMMD4-202ENST00000338995 FAM90A9PA6NNJ1 464 aa11.27□□□□□ -0.61
COMMD4-202ENST00000338995 FAM90A12PA8MX19 464 aa11.27□□□□□ -0.61
COMMD4-202ENST00000338995 FAM90A5PA8MXJ8 464 aa11.27□□□□□ -0.61
COMMD4-202ENST00000338995 J3QR06 171 aa11.27□□□□□ -0.61
COMMD4-202ENST00000338995 SNRNP70P08621 437 aaKnown RBP11.27□□□□□ -0.61
COMMD4-202ENST00000338995 FAM90A15PP0C7V4 464 aa11.27□□□□□ -0.61
COMMD4-202ENST00000338995 FAM90A13PP0C7W8 464 aa11.27□□□□□ -0.61
COMMD4-202ENST00000338995 FAM90A14PP0C7W9 464 aa11.27□□□□□ -0.61
COMMD4-202ENST00000338995 FAM90A24PP0C7X0 464 aa11.27□□□□□ -0.61
COMMD4-202ENST00000338995 FCGR1AP12314 374 aa11.27□□□□□ -0.61
COMMD4-202ENST00000338995 KIR3DL2P43630 455 aa11.27□□□□□ -0.61
COMMD4-202ENST00000338995 CCR9P51686 369 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms