RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 PIGTQ969N2 578 aa9.31□□□□□ -0.92
RTN3-201ENST00000338850 FBXO17Q96EF6 278 aa9.31□□□□□ -0.92
RTN3-201ENST00000338850 BORCS8Q96FH0 119 aa9.31□□□□□ -0.92
RTN3-201ENST00000338850 REEP6Q96HR9 211 aa9.31□□□□□ -0.92
RTN3-201ENST00000338850 ZNF2Q9BSG1 426 aaPredicted RBP9.31□□□□□ -0.92
RTN3-201ENST00000338850 ST6GALNAC5Q9BVH7 336 aa9.31□□□□□ -0.92
RTN3-201ENST00000338850 LINC00470Q9BZP3 86 aa9.31□□□□□ -0.92
RTN3-201ENST00000338850 HIPK2Q9H2X6 1198 aa9.31□□□□□ -0.92
RTN3-201ENST00000338850 RHOFQ9HBH0 211 aa9.31□□□□□ -0.92
RTN3-201ENST00000338850 ZNF286AQ9HBT8 521 aa9.31□□□□□ -0.92
RTN3-201ENST00000338850 HPF1Q9NWY4 346 aa9.31□□□□□ -0.92
RTN3-201ENST00000338850 AMDHD2Q9Y303 409 aa9.31□□□□□ -0.92
RTN3-201ENST00000338850 STRAPQ9Y3F4 350 aaKnown RBP9.31□□□□□ -0.92
RTN3-201ENST00000338850 TMED3Q9Y3Q3 217 aa9.31□□□□□ -0.92
RTN3-201ENST00000338850 IGKV3D-15A0A087WSY6 115 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 BORCS7-ASMTA0A0B4J1R7 106 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 PQLC2LA1A4F0 135 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 FAM157AC9JC47 383 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 GPR31O00270 319 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 GPR137BO60478 399 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 PDCD6O75340 191 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 HTR3BO95264 441 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 CDS2O95674 445 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 ZNF728P0DKX0 622 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 MMP9P14780 707 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 KLK2P20151 261 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 COL8A1P27658 744 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 HOXA1P49639 335 aaPredicted RBP9.3□□□□□ -0.92
RTN3-201ENST00000338850 MTCP1P56278 107 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 RSU1Q15404 277 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 HYAL4Q2M3T9 481 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 GGNBP1Q5YKI7 109 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 LIAT1Q6ZQX7 453 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 COLCA1Q6ZS62 124 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 GGNQ86UU5 652 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 LURAP1LQ8IV03 231 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 IQCF2Q8IXL9 164 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 LGI3Q8N145 548 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 LRRC18Q8N456 261 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 OR51F2Q8NH61 342 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 C18orf12Q96KH6 178 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 MICU1Q9BPX6 476 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 CMSS1Q9BQ75 279 aaKnown RBP9.3□□□□□ -0.92
RTN3-201ENST00000338850 GINS3Q9BRX5 216 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 RSRP1Q9BUV0 290 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 RBM24Q9BX46 236 aaKnown RBP9.3□□□□□ -0.92
RTN3-201ENST00000338850 EGLN1Q9GZT9 426 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 OPA3Q9H6K4 179 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 TUBA4BQ9H853 241 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 FAM212BQ9NTI7 297 aaPredicted RBP9.3□□□□□ -0.92
RTN3-201ENST00000338850 ZNF701Q9NV72 531 aaPredicted RBP9.3□□□□□ -0.92
RTN3-201ENST00000338850 FBXO9Q9UK97 447 aaPredicted RBP9.3□□□□□ -0.92
RTN3-201ENST00000338850 SLC7A11Q9UPY5 501 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 STARD10Q9Y365 291 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 TIMM10BQ9Y5J6 103 aa9.3□□□□□ -0.92
RTN3-201ENST00000338850 IGKV1D-8A0A087WSZ0 117 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 ZNF816-ZNF321PA0A0X1KG74 233 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 C5orf63A6NC05 138 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 SDCBPO00560 298 aaPredicted RBP9.29□□□□□ -0.92
RTN3-201ENST00000338850 MSTNO14793 375 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 CYTIPO60759 359 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 IFNA4P05014 189 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 CELA2AP08217 269 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 TMEM225BP0DP42 221 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 EDN3P14138 238 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 PVALBP20472 110 aaPredicted RBP9.29□□□□□ -0.92
RTN3-201ENST00000338850 ACKR3P25106 362 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 DUSP1P28562 367 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 GLP1RP43220 463 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 CLDN15P56746 228 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 SNAI3Q3KNW1 292 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 ZNF787Q6DD87 383 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 C6orf201Q7Z4U5 140 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 LINC00596Q86U02 117 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 OSR2Q8N2R0 312 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 TMEM156Q8N614 296 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 OR2V1Q8NHB1 315 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 CPNE4Q96A23 557 aaPredicted RBP9.29□□□□□ -0.92
RTN3-201ENST00000338850 MARS2Q96GW9 593 aaKnown RBP9.29□□□□□ -0.92
RTN3-201ENST00000338850 SPIN2AQ99865 258 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 SPIN2BQ9BPZ2 258 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 C1QTNF5Q9BXJ0 243 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 SRXN1Q9BYN0 137 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 OR2H1Q9GZK4 316 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 PLA2G3Q9NZ20 509 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 FBXL17Q9UF56 701 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 AK3Q9UIJ7 227 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 NBPF19A0A087WUL8 3843 aa9.29□□□□□ -0.92
RTN3-201ENST00000338850 TRBV6-6A0A0A6YYG2 114 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 TRAV17A0A0B4J275 112 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 RNASEK-C17orf49H0YIS7 233 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 RPL36A-HNRNPH2H7BZ11 118 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 NRASP01111 189 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 P04436 131 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 HOXB5P09067 269 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 MMP7P09237 267 aaPredicted RBP9.28□□□□□ -0.92
RTN3-201ENST00000338850 DANCRP0C864 163 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 SPP1P10451 314 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 MUC1P15941 1255 aaPredicted RBP9.28□□□□□ -0.92
RTN3-201ENST00000338850 ZNF32P17041 273 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms