RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 DPPA3Q6W0C5 159 aa10.86□□□□□ -0.67
FN1-202ENST00000336916 ZNF793Q6ZN11 406 aa10.86□□□□□ -0.67
FN1-202ENST00000336916 SPACA5Q96QH8 159 aa10.86□□□□□ -0.67
FN1-202ENST00000336916 PLA2G2FQ9BZM2 168 aa10.86□□□□□ -0.67
FN1-202ENST00000336916 CFDP00746 253 aaPredicted RBP10.86□□□□□ -0.67
FN1-202ENST00000336916 M6PRP20645 277 aa10.86□□□□□ -0.67
FN1-202ENST00000336916 SLC38A11Q08AI6 406 aa10.86□□□□□ -0.67
FN1-202ENST00000336916 YIPF6Q96EC8 236 aa10.86□□□□□ -0.67
FN1-202ENST00000336916 ZDHHC11Q9H8X9 412 aa10.86□□□□□ -0.67
FN1-202ENST00000336916 HAND1O96004 215 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 NGFRP08138 427 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 MMP7P09237 267 aaPredicted RBP10.85□□□□□ -0.67
FN1-202ENST00000336916 FAM3AP98173 230 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 TMEM92Q6UXU6 159 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 ZNF788Q6ZQV5 615 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 GTF2H5Q6ZYL4 71 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 MRGPREQ86SM8 312 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 TMEM30AQ9NV96 361 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 YBX2Q9Y2T7 364 aaKnown RBP10.85□□□□□ -0.67
FN1-202ENST00000336916 ERRFI1Q9UJM3 462 aaPredicted RBP10.85□□□□□ -0.67
FN1-202ENST00000336916 IGSF23A1L1A6 192 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 LIPT2A6NK58 231 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 HSBP1O75506 76 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 ACAA1P09110 424 aaPredicted RBP10.85□□□□□ -0.67
FN1-202ENST00000336916 KIAA0141Q14154 515 aaPredicted RBP10.85□□□□□ -0.67
FN1-202ENST00000336916 OR2T2Q6IF00 324 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 ETV3LQ6ZN32 361 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 OR4A4PQ8NGN8 299 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 STARD10Q9Y365 291 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 GPX5O75715 221 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 PEX11BO96011 259 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 FAM106CPP0CH98 169 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 LIFP15018 202 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 IL24Q13007 206 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 GPR119Q8TDV5 335 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 NPAS1Q99742 590 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 TECRQ9NZ01 308 aaKnown RBP10.85□□□□□ -0.67
FN1-202ENST00000336916 CTDSPLO15194 276 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 RER1O15258 196 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 FCGR3BO75015 233 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 PCBP3P57721 371 aaKnown RBP10.85□□□□□ -0.67
FN1-202ENST00000336916 FABP9Q0Z7S8 132 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 C1orf185Q5T7R7 199 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 GLDNQ6ZMI3 551 aaPredicted RBP10.85□□□□□ -0.67
FN1-202ENST00000336916 NTF3P20783 257 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 CD80P33681 288 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 RAE1P78406 368 aaKnown RBP10.85□□□□□ -0.67
FN1-202ENST00000336916 C19orf57Q0VDD7 668 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 ARHGAP5-AS1Q96IT6 56 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 PIMREGQ9BSJ6 248 aa10.85□□□□□ -0.67
FN1-202ENST00000336916 A0A0U1RQV5 110 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 LOC102723971A0A1B0GUV8 181 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 MC5RP33032 325 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 CMBLQ96DG6 245 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 NOL4LQ96MY1 436 aaPredicted RBP10.84□□□□□ -0.67
FN1-202ENST00000336916 WDFY2Q96P53 400 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 COA4Q9NYJ1 87 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 PRR33A8MZF0 331 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 RAB29O14966 203 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 PDE6DO43924 150 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 LSM11P83369 360 aaKnown RBP eCLIP10.84□□□□□ -0.67
FN1-202ENST00000336916 LIAT1Q6ZQX7 453 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 SP7Q8TDD2 431 aaPredicted RBP10.84□□□□□ -0.67
FN1-202ENST00000336916 SRRQ9GZT4 340 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 B4DEV8 164 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 STPG1Q5TH74 334 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 OR1L8Q8NGR8 309 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 C20orf24Q9BUV8 137 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 SPRY1O43609 319 aaPredicted RBP10.84□□□□□ -0.67
FN1-202ENST00000336916 NDUFB6O95139 128 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 ZFP36L2P47974 494 aaKnown RBP10.84□□□□□ -0.67
FN1-202ENST00000336916 LINC01555Q8NAE3 123 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 UBE2FQ969M7 185 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 FLYWCH2Q96CP2 140 aaKnown RBP10.84□□□□□ -0.67
FN1-202ENST00000336916 ZNF426Q9BUY5 554 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 PSG11Q9UQ72 335 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 RCL1Q9Y2P8 373 aaKnown RBP10.84□□□□□ -0.67
FN1-202ENST00000336916 OCEL1Q9H607 264 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 TMEM272A0A1B0GTI8 110 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 RIGQ13278 110 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 WDR38Q5JTN6 314 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 ZNF770Q6IQ21 691 aaPredicted RBP10.84□□□□□ -0.67
FN1-202ENST00000336916 PRR27Q6MZM9 219 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 LRRTM1Q86UE6 522 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 SLC35B3Q9H1N7 401 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 ZNF71Q9NQZ8 489 aaPredicted RBP10.84□□□□□ -0.67
FN1-202ENST00000336916 ARL2-SNX15V9GYD0 113 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 TNCP24821 2201 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 WNT9BO14905 357 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 IGHA1P01876 353 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 IGHA2P01877 340 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 PPP1CCP36873 323 aaKnown RBP10.84□□□□□ -0.67
FN1-202ENST00000336916 GNG10P50151 68 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 RPEL1Q2QD12 228 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 Q3ZCU0 254 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 DHRS7BQ6IAN0 325 aaPredicted RBP10.84□□□□□ -0.67
FN1-202ENST00000336916 ZNF683Q8IZ20 524 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 LURAP1Q96LR2 239 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 TMUB1Q9BVT8 246 aa10.84□□□□□ -0.67
FN1-202ENST00000336916 AUNIPQ9H7T9 357 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms