RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 RPS2P15880 293 aaKnown RBP10.55□□□□□ -0.72
ZNF548-201ENST00000336128 FCGR2CP31995 323 aa10.55□□□□□ -0.72
ZNF548-201ENST00000336128 ZNF81P51508 661 aa10.55□□□□□ -0.72
ZNF548-201ENST00000336128 GMFBP60983 142 aa10.55□□□□□ -0.72
ZNF548-201ENST00000336128 C1QTNF12Q5T7M4 302 aa10.55□□□□□ -0.72
ZNF548-201ENST00000336128 PRAMEF6Q5VXH4 476 aa10.55□□□□□ -0.72
ZNF548-201ENST00000336128 C11orf53Q8IXP5 236 aa10.55□□□□□ -0.72
ZNF548-201ENST00000336128 MRPL30Q8TCC3 161 aaKnown RBP10.55□□□□□ -0.72
ZNF548-201ENST00000336128 TLNRD1Q9H1K6 362 aa10.55□□□□□ -0.72
ZNF548-201ENST00000336128 ELOVL5Q9NYP7 299 aa10.55□□□□□ -0.72
ZNF548-201ENST00000336128 SHPKQ9UHJ6 478 aa10.55□□□□□ -0.72
ZNF548-201ENST00000336128 ACACAQ13085 2346 aa10.55□□□□□ -0.72
ZNF548-201ENST00000336128 DBX1A6NMT0 343 aa10.55□□□□□ -0.72
ZNF548-201ENST00000336128 KNG1P01042 644 aa10.55□□□□□ -0.72
ZNF548-201ENST00000336128 ACAA1P09110 424 aaPredicted RBP10.55□□□□□ -0.72
ZNF548-201ENST00000336128 ZNF728P0DKX0 622 aa10.55□□□□□ -0.72
ZNF548-201ENST00000336128 SSTR2P30874 369 aa10.55□□□□□ -0.72
ZNF548-201ENST00000336128 FXYD4P59646 89 aa10.55□□□□□ -0.72
ZNF548-201ENST00000336128 SORDQ00796 357 aa10.55□□□□□ -0.72
ZNF548-201ENST00000336128 RBM39Q14498 530 aaKnown RBP10.55□□□□□ -0.72
ZNF548-201ENST00000336128 SPERTQ8NA61 448 aa10.55□□□□□ -0.72
ZNF548-201ENST00000336128 GTF3AQ92664 365 aaKnown RBP10.55□□□□□ -0.72
ZNF548-201ENST00000336128 TOMM40LQ969M1 308 aa10.55□□□□□ -0.72
ZNF548-201ENST00000336128 ELMOD3Q96FG2 381 aa10.55□□□□□ -0.72
ZNF548-201ENST00000336128 PDCD10Q9BUL8 212 aa10.55□□□□□ -0.72
ZNF548-201ENST00000336128 RIMS4Q9H426 269 aaPredicted RBP10.55□□□□□ -0.72
ZNF548-201ENST00000336128 PRR13Q9NZ81 148 aa10.55□□□□□ -0.72
ZNF548-201ENST00000336128 FXYD6-FXYD2A0A087WZ82 144 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 TRAV14DV4A0A0A6YYC5 116 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 TRBV6-6A0A0A6YYG2 114 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 A0A1B0GWJ7 208 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 A6NLC8 198 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 FAM25EA8MYX2 175 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 SIRPB1O00241 398 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 NOS1APO75052 506 aaPredicted RBP10.54□□□□□ -0.72
ZNF548-201ENST00000336128 SLC34A2O95436 690 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 OR2H2O95918 312 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 CD8AP01732 235 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 CXCL2P19875 107 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 AADACP22760 399 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 NKX6-1P78426 367 aaPredicted RBP10.54□□□□□ -0.72
ZNF548-201ENST00000336128 ANKRD55Q3KP44 614 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 PAN3Q58A45 887 aaKnown RBP10.54□□□□□ -0.72
ZNF548-201ENST00000336128 IGSF11Q5DX21 431 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 ZNF826PQ6ZT77 177 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 C22orf34Q6ZV56 151 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 C5orf24Q7Z6I8 188 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 LRP11Q86VZ4 500 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 COQ8AQ8NI60 647 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 MOB3AQ96BX8 217 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 HES4Q9HCC6 221 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 JKAMPQ9P055 326 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 KIR2DS1A0A191URI9 304 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 TRDCB7Z8K6 153 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 ATP6V1G2-DDX39BF2Z307 99 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 SLC33A1O00400 549 aaPredicted RBP10.54□□□□□ -0.72
ZNF548-201ENST00000336128 ZNF250P15622 560 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 NFYAP23511 347 aaPredicted RBP10.54□□□□□ -0.72
ZNF548-201ENST00000336128 GLRXP35754 106 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 KIR2DS4P43632 304 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 HERV-K104P61576 105 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 KIR2DS1Q14954 304 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 SPIN3Q5JUX0 258 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 SEC22AQ96IW7 307 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 DUSP13Q9UII6 198 aa10.54□□□□□ -0.72
ZNF548-201ENST00000336128 ANKRD11Q6UB99 2663 aaPredicted RBP10.54□□□□□ -0.72
ZNF548-201ENST00000336128 CFAP47Q6ZTR5 3102 aa10.53□□□□□ -0.72
ZNF548-201ENST00000336128 RFPL4AA6NLU0 287 aa10.53□□□□□ -0.72
ZNF548-201ENST00000336128 RFPL4AL1F8VTS6 287 aa10.53□□□□□ -0.72
ZNF548-201ENST00000336128 C16orf97H3BN30 126 aa10.53□□□□□ -0.72
ZNF548-201ENST00000336128 L7N2F9 121 aa10.53□□□□□ -0.72
ZNF548-201ENST00000336128 SH2D1BO14796 132 aa10.53□□□□□ -0.72
ZNF548-201ENST00000336128 SCTP09683 121 aa10.53□□□□□ -0.72
ZNF548-201ENST00000336128 SERPINF1P36955 418 aa10.53□□□□□ -0.72
ZNF548-201ENST00000336128 SEC61A1P61619 476 aaKnown RBP10.53□□□□□ -0.72
ZNF548-201ENST00000336128 MZT1Q08AG7 82 aa10.53□□□□□ -0.72
ZNF548-201ENST00000336128 ZNF146Q15072 292 aa10.53□□□□□ -0.72
ZNF548-201ENST00000336128 ZNF880Q6PDB4 577 aa10.53□□□□□ -0.72
ZNF548-201ENST00000336128 VHLLQ6RSH7 139 aa10.53□□□□□ -0.72
ZNF548-201ENST00000336128 FIP1L1Q6UN15 594 aaKnown RBP10.53□□□□□ -0.72
ZNF548-201ENST00000336128 HEXA-AS1Q9H8Q6 139 aa10.53□□□□□ -0.72
ZNF548-201ENST00000336128 UFSP2Q9NUQ7 469 aa10.53□□□□□ -0.72
ZNF548-201ENST00000336128 C5orf51A6NDU8 294 aa10.52□□□□□ -0.72
ZNF548-201ENST00000336128 CRYM-AS1A6NIL9 109 aa10.52□□□□□ -0.72
ZNF548-201ENST00000336128 HMSDA8MTL9 139 aa10.52□□□□□ -0.72
ZNF548-201ENST00000336128 WNT9BO14905 357 aa10.52□□□□□ -0.72
ZNF548-201ENST00000336128 ARPC5O15511 151 aa10.52□□□□□ -0.72
ZNF548-201ENST00000336128 HAND1O96004 215 aa10.52□□□□□ -0.72
ZNF548-201ENST00000336128 IFNA2P01563 188 aa10.52□□□□□ -0.72
ZNF548-201ENST00000336128 IGHV3-13P01766 116 aa10.52□□□□□ -0.72
ZNF548-201ENST00000336128 CD40P25942 277 aa10.52□□□□□ -0.72
ZNF548-201ENST00000336128 MDH2P40926 338 aaKnown RBP10.52□□□□□ -0.72
ZNF548-201ENST00000336128 UCP3P55916 312 aa10.52□□□□□ -0.72
ZNF548-201ENST00000336128 KLF3P57682 345 aaPredicted RBP10.52□□□□□ -0.72
ZNF548-201ENST00000336128 RPS23P62266 143 aaKnown RBP10.52□□□□□ -0.72
ZNF548-201ENST00000336128 HERPUD1Q15011 391 aa10.52□□□□□ -0.72
ZNF548-201ENST00000336128 NDUFA5Q16718 116 aa10.52□□□□□ -0.72
ZNF548-201ENST00000336128 SHEQ5VZ18 495 aa10.52□□□□□ -0.72
ZNF548-201ENST00000336128 WDR82Q6UXN9 313 aa10.52□□□□□ -0.72
ZNF548-201ENST00000336128 GSG1LQ6UXU4 331 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms