RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 GNG13Q9P2W3 67 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 TRAF3IP2O43734 574 aaPredicted RBP13.09□□□□□ -0.31
C9orf47-201ENST00000334490 OPN1MWP04001 364 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 ADRA2AP08913 450 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 CT45A10P0DMU9 189 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 OPN1MW2P0DN77 364 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 OPN1MW3P0DN78 364 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 OR13C7P0DN81 318 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 CD59P13987 128 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 RPS4XP62701 263 aaKnown RBP13.09□□□□□ -0.31
C9orf47-201ENST00000334490 BAP18Q8IXM2 172 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 IGKV1D-42A0A075B6H8 117 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 SLC25A6P12236 298 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 F2RP25116 425 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 KIR3DL2P43630 455 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 P2RX3P56373 397 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 FLI1Q01543 452 aaPredicted RBP13.09□□□□□ -0.31
C9orf47-201ENST00000334490 USF2Q15853 346 aaPredicted RBP13.09□□□□□ -0.31
C9orf47-201ENST00000334490 SSX2Q16385 188 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 ASCL5Q7RTU5 278 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 ZNF519Q8TB69 540 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 GREB1Q4ZG55 1949 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 A0A0U1RQV5 110 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 A0A1W2PNV4 684 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 COX7A2P2O60397 106 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 PRF1P14222 555 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 IRF3Q14653 427 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 RFLNBQ8N5W9 214 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 OR1K1Q8NGR3 316 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 ADTRPQ96IZ2 230 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 IMMP1LQ96LU5 166 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 AMELYQ99218 206 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 AICDAQ9GZX7 198 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 NAA60Q9H7X0 242 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 PI4KAP42356 2102 aa13.08□□□□□ -0.31
C9orf47-201ENST00000334490 IGLV1-36A0A0B4J1U3 117 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 CRYZL1O95825 349 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 RBP4P02753 201 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 CELA3AP09093 270 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 PMELP40967 661 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 GABRA6Q16445 453 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 TMEM91Q6ZNR0 172 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 ZFP82Q8N141 532 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 TMEM104Q8NE00 496 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 RASL12Q9NYN1 266 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 CACNG5Q9UF02 275 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 F2RL2O00254 374 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 SFT2D2O95562 160 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 MBP02144 154 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 HOXB1P14653 301 aaPredicted RBP13.08□□□□□ -0.32
C9orf47-201ENST00000334490 CBR1P16152 277 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 HMGN3Q15651 99 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 TMEM123Q8N131 208 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 MISP3Q96FF7 219 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 SFXN3Q9BWM7 321 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 ATP6V1G2-DDX39BF2Z307 99 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 CLN5O75503 358 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 ONECUT2O95948 504 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 FGF7P21781 194 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 CD80P33681 288 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 RPL31P62899 125 aaKnown RBP13.08□□□□□ -0.32
C9orf47-201ENST00000334490 Q56UQ5 140 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 OR2T6Q8NHC8 308 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 SOX7Q9BT81 388 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 ST6GALNAC2Q9UJ37 374 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 KRBOX1C9JBD0 128 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 PRSS44E7EML9 344 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 OR4A8P0C604 315 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 OR5AC1P0C628 307 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 OPRK1P41145 380 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 HAGHQ16775 308 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 CLEC2AQ6UVW9 174 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 LILRB4Q8NHJ6 448 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 OR2V2Q96R30 315 aa13.08□□□□□ -0.32
C9orf47-201ENST00000334490 ZNF703Q9H7S9 590 aaPredicted RBP13.08□□□□□ -0.32
C9orf47-201ENST00000334490 CA11O75493 328 aa13.07□□□□□ -0.32
C9orf47-201ENST00000334490 ZFP36L1Q07352 338 aaKnown RBP13.07□□□□□ -0.32
C9orf47-201ENST00000334490 AESQ08117 197 aa13.07□□□□□ -0.32
C9orf47-201ENST00000334490 C19orf57Q0VDD7 668 aa13.07□□□□□ -0.32
C9orf47-201ENST00000334490 OR4S2Q8NH73 311 aa13.07□□□□□ -0.32
C9orf47-201ENST00000334490 C17orf50Q8WW18 174 aa13.07□□□□□ -0.32
C9orf47-201ENST00000334490 PFDN5Q99471 154 aa13.07□□□□□ -0.32
C9orf47-201ENST00000334490 NPTNQ9Y639 398 aa13.07□□□□□ -0.32
C9orf47-201ENST00000334490 SPNP16150 400 aa13.07□□□□□ -0.32
C9orf47-201ENST00000334490 TNFSF10P50591 281 aa13.07□□□□□ -0.32
C9orf47-201ENST00000334490 ZBTB44Q8NCP5 570 aa13.07□□□□□ -0.32
C9orf47-201ENST00000334490 SIRT4Q9Y6E7 314 aaPredicted RBP13.07□□□□□ -0.32
C9orf47-201ENST00000334490 RLFQ13129 1914 aa13.07□□□□□ -0.32
C9orf47-201ENST00000334490 UMODP07911 640 aa13.07□□□□□ -0.32
C9orf47-201ENST00000334490 TGIF2LYQ8IUE0 185 aa13.07□□□□□ -0.32
C9orf47-201ENST00000334490 TGIF2LXQ8IUE1 241 aa13.07□□□□□ -0.32
C9orf47-201ENST00000334490 SAV1Q9H4B6 383 aaPredicted RBP13.07□□□□□ -0.32
C9orf47-201ENST00000334490 UBE2L5PA0A1B0GUS4 154 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 FGF2P09038 288 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 KIR2DS2P43631 304 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 MUC20Q8N307 709 aaPredicted RBP13.06□□□□□ -0.32
C9orf47-201ENST00000334490 WIPI2Q9Y4P8 454 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 ANKRD20A5PA0PJZ0 165 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 PRDX2P32119 198 aa13.06□□□□□ -0.32
C9orf47-201ENST00000334490 ITLN1Q8WWA0 313 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms