RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 WIPI1Q5MNZ9 446 aaPredicted RBP10.62□□□□□ -0.71
VPS33B-201ENST00000333371 DCAF12Q5T6F0 453 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 AAED1Q7RTV5 226 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 ABHD3Q8WU67 409 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 SLAMF9Q96A28 289 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 MOB3AQ96BX8 217 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 ARRDC1-AS1Q9H2J1 176 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 IFT22Q9H7X7 185 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 ZNF286AQ9HBT8 521 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 ZMAT5Q9UDW3 170 aaKnown RBP10.62□□□□□ -0.71
VPS33B-201ENST00000333371 hCG_38984A0A1B0GV85 526 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 IGSF23A1L1A6 192 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 OR6C6A6NF89 314 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 ZNF716A6NP11 495 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 TRAPPC6AO75865 159 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 MPLP40238 635 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 CEBPGP53567 150 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 CARD18P57730 90 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 HERV-K104P61576 105 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 EWSR1Q01844 656 aaKnown RBP eCLIP10.62□□□□□ -0.71
VPS33B-201ENST00000333371 ADAM5Q6NVV9 412 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 LHFPL2Q6ZUX7 228 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 GGNQ86UU5 652 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 LGI3Q8N145 548 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 ZNF611Q8N823 705 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 ZFP62Q8NB50 900 aaPredicted RBP10.62□□□□□ -0.71
VPS33B-201ENST00000333371 FOXB1Q99853 325 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 SUCNR1Q9BXA5 334 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 SH2D2AQ9NP31 389 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 ARHGAP21Q5T5U3 1957 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 PDCD6O75340 191 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 PPYP01298 95 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 TCN2P20062 427 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 OTX2P32243 289 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 CLDN15P56746 228 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 CXorf66Q5JRM2 361 aaPredicted RBP10.61□□□□□ -0.71
VPS33B-201ENST00000333371 SPIN3Q5JUX0 258 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 OR2H1Q9GZK4 316 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 EGLN1Q9GZT9 426 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 SLC7A10Q9NS82 523 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 PUS1Q9Y606 427 aaKnown RBP eCLIP10.61□□□□□ -0.71
VPS33B-201ENST00000333371 POMT1Q9Y6A1 747 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 C5orf52A6NGY3 159 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 SSSCA1O60232 199 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 CBR3O75828 277 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 S100A6P06703 90 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 CST2P09228 141 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 FOLR2P14207 255 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 ACP1P24666 158 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 RBM11P57052 281 aaKnown RBP10.61□□□□□ -0.71
VPS33B-201ENST00000333371 RAC3P60763 192 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 FABP9Q0Z7S8 132 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 MALLQ13021 153 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 TMEM42Q69YG0 159 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 ASCL4Q6XD76 172 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 CPEB3Q8NE35 698 aaKnown RBP10.61□□□□□ -0.71
VPS33B-201ENST00000333371 OR4D5Q8NGN0 318 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 TMEM171Q8WVE6 324 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 BOD1Q96IK1 185 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 LOXL2Q9Y4K0 774 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 CHD3Q12873 2000 aaKnown RBP10.61□□□□□ -0.71
VPS33B-201ENST00000333371 LOC400499M0QZD8 3231 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 MED12LQ86YW9 2145 aa10.61□□□□□ -0.71
VPS33B-201ENST00000333371 C3orf85A0A1B0GTC6 90 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 B4E171 279 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 CST7O76096 145 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 IFNA4P05014 189 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 FBP1P09467 338 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 ZNF806P0C7X5 589 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 ZNF14P17017 642 aaPredicted RBP10.6□□□□□ -0.71
VPS33B-201ENST00000333371 GNRHRP30968 328 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 TSPAN7P41732 249 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 GLP1RP43220 463 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 SULT1A1P50225 295 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 TMEM217Q8N7C4 229 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 LRTM2Q8N967 370 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 OR10D3Q8NH80 312 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 PAPOLGQ9BWT3 736 aaKnown RBP10.6□□□□□ -0.71
VPS33B-201ENST00000333371 FGF23Q9GZV9 251 aaPredicted RBP10.6□□□□□ -0.71
VPS33B-201ENST00000333371 KNTC1P50748 2209 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 A0A096LPE4 126 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 IGKV1D-13A0A0B4J2D9 117 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 A0A1W2PPZ6 126 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 ZNF724A8MTY0 619 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 M0R296 226 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 MPPED1O15442 326 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 TNFSF12O43508 249 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 SCTP09683 121 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 IGKV1-13P0DP09 117 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 NQO2P16083 231 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 BCL3P20749 454 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 MLF1P58340 268 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 RUNX1Q01196 453 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 TSC22D1Q15714 1073 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 IGFBP7Q16270 282 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 TBC1D26Q86UD7 250 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 STRADBQ9C0K7 418 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 SLC7A11Q9UPY5 501 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 GTF3C1Q12789 2109 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 DSPP15924 2871 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms