RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 CYB5BO43169 146 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 HIST1H2BKO60814 126 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 HIST1H2BJP06899 126 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 HIST1H2BOP23527 126 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 HIST1H2BBP33778 126 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 HIST1H2BDP58876 126 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 HIST1H2BCP62807 126 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 VAMP2P63027 116 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 HIST2H2BEQ16778 126 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 CXorf66Q5JRM2 361 aaPredicted RBP20.42■□□□□ 0.86
TSKU-201ENST00000333090 SPIN3Q5JUX0 258 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 HIST2H2BFQ5QNW6 126 aaPredicted RBP20.42■□□□□ 0.86
TSKU-201ENST00000333090 ZNF695Q8IW36 515 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 CCDC54Q8NEL0 328 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 HIST1H2BHQ93079 126 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 GPHA2Q96T91 129 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 HIST1H2BNQ99877 126 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 HIST1H2BMQ99879 126 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 SDK2Q58EX2 2172 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 PROB1E7EW31 1015 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 SCAF4O95104 1147 aaKnown RBP20.42■□□□□ 0.86
TSKU-201ENST00000333090 NXPH3O95157 252 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 ICAM4Q14773 271 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 RABEPKQ7Z6M1 372 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 TMEM123Q8N131 208 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 FADS6Q8N9I5 356 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 OR6C1Q96RD1 312 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 TMEM222Q9H0R3 208 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 HS3ST3B1Q9Y662 390 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 TRIOBPQ9H2D6 2365 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 A0A087WWC5 75 aa20.41■□□□□ 0.86
TSKU-201ENST00000333090 GFI1BQ5VTD9 330 aa20.41■□□□□ 0.86
TSKU-201ENST00000333090 ZNF774Q6NX45 483 aa20.41■□□□□ 0.86
TSKU-201ENST00000333090 FOXL2NBQ6ZUU3 175 aa20.41■□□□□ 0.86
TSKU-201ENST00000333090 TVP23CQ96ET8 276 aa20.41■□□□□ 0.86
TSKU-201ENST00000333090 LYRM2Q9NU23 88 aaPredicted RBP20.41■□□□□ 0.86
TSKU-201ENST00000333090 NRASP01111 189 aa20.41■□□□□ 0.86
TSKU-201ENST00000333090 KLK3P07288 261 aaPredicted RBP20.41■□□□□ 0.86
TSKU-201ENST00000333090 DYNLT3P51808 116 aa20.41■□□□□ 0.86
TSKU-201ENST00000333090 MALLQ13021 153 aa20.41■□□□□ 0.86
TSKU-201ENST00000333090 LHFPL2Q6ZUX7 228 aa20.41■□□□□ 0.86
TSKU-201ENST00000333090 OR8G5Q8NG78 346 aa20.41■□□□□ 0.86
TSKU-201ENST00000333090 SLC25A31Q9H0C2 315 aa20.41■□□□□ 0.86
TSKU-201ENST00000333090 OPA3Q9H6K4 179 aa20.41■□□□□ 0.86
TSKU-201ENST00000333090 TERTO14746 1132 aaKnown RBP20.4■□□□□ 0.86
TSKU-201ENST00000333090 TRGC2P03986 189 aa20.4■□□□□ 0.86
TSKU-201ENST00000333090 EPHA1P21709 976 aa20.4■□□□□ 0.86
TSKU-201ENST00000333090 RAET1LQ5VY80 246 aa20.4■□□□□ 0.86
TSKU-201ENST00000333090 MAML2Q8IZL2 1156 aaPredicted RBP20.4■□□□□ 0.86
TSKU-201ENST00000333090 ADAM20O43506 726 aa20.4■□□□□ 0.86
TSKU-201ENST00000333090 PDCD6O75340 191 aa20.4■□□□□ 0.86
TSKU-201ENST00000333090 SCRG1O75711 98 aa20.4■□□□□ 0.86
TSKU-201ENST00000333090 OR7C1O76099 320 aaPredicted RBP20.4■□□□□ 0.86
TSKU-201ENST00000333090 TCN2P20062 427 aa20.4■□□□□ 0.86
TSKU-201ENST00000333090 GPX4P36969 197 aaPredicted RBP20.4■□□□□ 0.86
TSKU-201ENST00000333090 AKR1C8PQ5T2L2 129 aa20.4■□□□□ 0.86
TSKU-201ENST00000333090 ZNF100Q8IYN0 542 aa20.4■□□□□ 0.86
TSKU-201ENST00000333090 GPR61Q9BZJ8 451 aa20.4■□□□□ 0.86
TSKU-201ENST00000333090 P4HTMQ9NXG6 502 aa20.4■□□□□ 0.86
TSKU-201ENST00000333090 CHCHD2Q9Y6H1 151 aaPredicted RBP20.4■□□□□ 0.86
TSKU-201ENST00000333090 CRYGSP22914 178 aa20.4■□□□□ 0.86
TSKU-201ENST00000333090 FKBP2P26885 142 aaKnown RBP20.4■□□□□ 0.86
TSKU-201ENST00000333090 GNRHRP30968 328 aa20.4■□□□□ 0.86
TSKU-201ENST00000333090 SRPXP78539 464 aa20.4■□□□□ 0.86
TSKU-201ENST00000333090 TBC1D26Q86UD7 250 aa20.4■□□□□ 0.86
TSKU-201ENST00000333090 SLC25A45Q8N413 288 aa20.4■□□□□ 0.86
TSKU-201ENST00000333090 PATE4P0C8F1 98 aa20.39■□□□□ 0.85
TSKU-201ENST00000333090 RPL23AP62750 156 aaKnown RBP20.39■□□□□ 0.85
TSKU-201ENST00000333090 WDR74Q6RFH5 385 aaPredicted RBP20.39■□□□□ 0.85
TSKU-201ENST00000333090 C5orf24Q7Z6I8 188 aa20.39■□□□□ 0.85
TSKU-201ENST00000333090 SLC7A10Q9NS82 523 aa20.39■□□□□ 0.85
TSKU-201ENST00000333090 SEC14L6B5MCN3 397 aa20.39■□□□□ 0.85
TSKU-201ENST00000333090 PPP1R2P9O14990 202 aa20.39■□□□□ 0.85
TSKU-201ENST00000333090 HSPB1P04792 205 aaKnown RBP20.39■□□□□ 0.85
TSKU-201ENST00000333090 NKX6-1P78426 367 aaPredicted RBP20.39■□□□□ 0.85
TSKU-201ENST00000333090 FAM27BQ5VT28 67 aa20.39■□□□□ 0.85
TSKU-201ENST00000333090 ASCL4Q6XD76 172 aa20.39■□□□□ 0.85
TSKU-201ENST00000333090 SPIN2AQ99865 258 aa20.39■□□□□ 0.85
TSKU-201ENST00000333090 SPIN2BQ9BPZ2 258 aa20.39■□□□□ 0.85
TSKU-201ENST00000333090 ZNF587BE7ETH6 402 aa20.38■□□□□ 0.85
TSKU-201ENST00000333090 TMEM50AO95807 157 aa20.38■□□□□ 0.85
TSKU-201ENST00000333090 SOD3P08294 240 aa20.38■□□□□ 0.85
TSKU-201ENST00000333090 ZNF506Q5JVG8 444 aa20.38■□□□□ 0.85
TSKU-201ENST00000333090 DPPA2Q7Z7J5 298 aa20.38■□□□□ 0.85
TSKU-201ENST00000333090 RHOVQ96L33 236 aa20.38■□□□□ 0.85
TSKU-201ENST00000333090 CMTM1Q8IZ96 169 aa20.38■□□□□ 0.85
TSKU-201ENST00000333090 GNPNAT1Q96EK6 184 aaPredicted RBP20.38■□□□□ 0.85
TSKU-201ENST00000333090 FOXD3Q9UJU5 478 aaPredicted RBP20.38■□□□□ 0.85
TSKU-201ENST00000333090 G3V3Y1 287 aa20.37■□□□□ 0.85
TSKU-201ENST00000333090 GLIPR1P48060 266 aa20.37■□□□□ 0.85
TSKU-201ENST00000333090 RAB35Q15286 201 aa20.37■□□□□ 0.85
TSKU-201ENST00000333090 CLDND2Q8NHS1 167 aa20.37■□□□□ 0.85
TSKU-201ENST00000333090 CPNE4Q96A23 557 aaPredicted RBP20.37■□□□□ 0.85
TSKU-201ENST00000333090 S100PBPQ96BU1 408 aa20.37■□□□□ 0.85
TSKU-201ENST00000333090 GFOD1Q9NXC2 390 aa20.37■□□□□ 0.85
TSKU-201ENST00000333090 ZNF732B4DXR9 585 aa20.37■□□□□ 0.85
TSKU-201ENST00000333090 SYNGR3O43761 229 aa20.37■□□□□ 0.85
TSKU-201ENST00000333090 MRPS34P82930 218 aaKnown RBP20.37■□□□□ 0.85
TSKU-201ENST00000333090 ZNF154Q13106 437 aa20.37■□□□□ 0.85
TSKU-201ENST00000333090 ODF3L1Q8IXM7 274 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms