RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 C16orf82Q7Z2V1 217 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 OR10G4Q8NGN3 311 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 OR10G9Q8NGN4 311 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 OR10G7Q8NGN6 311 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 TSPAN32Q96QS1 320 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 MMP15P51511 669 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 PIGYQ3MUY2 71 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 SLC6A13Q9NSD5 602 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 HAND1O96004 215 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 PLAUP00749 431 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 RAE1P78406 368 aaKnown RBP9.35□□□□□ -0.91
CLN8-201ENST00000331222 MOGAT2Q3SYC2 334 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 OR1N2Q8NGR9 330 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 ZNF519Q8TB69 540 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 FAM60AQ9NP50 221 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 TNFSF14O43557 240 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 CD1EP15812 388 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 NHLRC1Q6VVB1 395 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 TMEM229BQ8NBD8 167 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 OR8G5Q8NG78 346 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 VSTM2LQ96N03 204 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 TIMP4Q99727 224 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 IGHV1OR21-1A0A087WYE8 117 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 ITGBL1O95965 494 aaPredicted RBP9.34□□□□□ -0.91
CLN8-201ENST00000331222 PF4V1P10720 104 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 RPL29P47914 159 aaKnown RBP9.34□□□□□ -0.91
CLN8-201ENST00000331222 POLR2GP62487 172 aaKnown RBP eCLIP9.34□□□□□ -0.91
CLN8-201ENST00000331222 SLC35B1P78383 322 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 CCL8P80075 99 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 SH2D5Q6ZV89 423 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 D2HGDHQ8N465 521 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 ZNF561Q8N587 486 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 OR8B12Q8NGG6 310 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 SH2D2AQ9NP31 389 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 FANCMQ8IYD8 2048 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 HRKO00198 91 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 PLPP3O14495 311 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 LIMS3P0CW19 117 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 LIMS4P0CW20 117 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 EVX1P49640 407 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 C11orf87Q6NUJ2 197 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 OR1L6Q8NGR2 347 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 OR1L1Q8NH94 360 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 ADIPOR1Q96A54 375 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 MOGAT1Q96PD6 335 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 UCN2Q96RP3 112 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 DOCK7Q96N67 2140 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 SCGB1A1P11684 91 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 SPCS3P61009 180 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 TMEM128Q5BJH2 165 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 COL13A1Q5TAT6 717 aaPredicted RBP9.34□□□□□ -0.91
CLN8-201ENST00000331222 Q6ZNB5 142 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 TPRX1Q8N7U7 411 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 PTX4Q96A99 478 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 MS4A10Q96PG2 267 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 ZNF831Q5JPB2 1677 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 TRAV20A0A0B4J274 112 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 MFNGO00587 321 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 C1QBP02746 253 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 CD96P40200 585 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 GUK1Q16774 197 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 CLEC2AQ6UVW9 174 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 OVCH2Q7RTZ1 564 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 TMEM171Q8WVE6 324 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 CDCA4Q9BXL8 241 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 ZFP64Q9NPA5 681 aa9.34□□□□□ -0.91
CLN8-201ENST00000331222 TRPM3Q9HCF6 1732 aaPredicted RBP9.34□□□□□ -0.91
CLN8-201ENST00000331222 TMEM262E9PQX1 116 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 ZNF880Q6PDB4 577 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 FADS6Q8N9I5 356 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 OR4X1Q8NH49 305 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 R3HDM4Q96D70 268 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 RALYQ9UKM9 306 aaKnown RBP9.33□□□□□ -0.92
CLN8-201ENST00000331222 ADAMTS7Q9UKP4 1686 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 HMX2A2RU54 273 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 CDKN2AP42771 156 aaKnown RBP9.33□□□□□ -0.92
CLN8-201ENST00000331222 MRPS11P82912 194 aaKnown RBP9.33□□□□□ -0.92
CLN8-201ENST00000331222 DMRTA2Q96SC8 542 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 ATP5SQ99766 215 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 OR2T8A6NH00 312 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 CSF2RBP32927 897 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 PPP1R1AQ13522 171 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 MPV17LQ2QL34 196 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 CMPK2Q5EBM0 449 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 SPANXN1Q5VSR9 72 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 MRPL54Q6P161 138 aaKnown RBP9.33□□□□□ -0.92
CLN8-201ENST00000331222 CBLN3Q6UW01 205 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 Q8IYB0 196 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 FAM24BQ8N5W8 94 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 KLHDC1Q8N7A1 406 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 C16orf92Q96LL3 132 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 OR2J1Q9GZK6 312 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 GSX1Q9H4S2 264 aaPredicted RBP9.33□□□□□ -0.92
CLN8-201ENST00000331222 GPR27Q9NS67 375 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 OR6C3Q9NZP0 311 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 A0A1W2PRX2 142 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 ZNF324O75467 553 aaPredicted RBP9.33□□□□□ -0.92
CLN8-201ENST00000331222 GLULP15104 373 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 KCNMB1Q16558 191 aa9.33□□□□□ -0.92
CLN8-201ENST00000331222 RNF165Q6ZSG1 346 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms