RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 APLNRP35414 380 aa12.47□□□□□ -0.41
TPM3-206ENST00000330188 ARHGDIBP52566 201 aa12.47□□□□□ -0.41
TPM3-206ENST00000330188 AKR1C2P52895 323 aa12.47□□□□□ -0.41
TPM3-206ENST00000330188 AKR1C1Q04828 323 aa12.47□□□□□ -0.41
TPM3-206ENST00000330188 RNFT1Q5M7Z0 435 aa12.47□□□□□ -0.41
TPM3-206ENST00000330188 OR5P3Q8WZ94 311 aa12.47□□□□□ -0.41
TPM3-206ENST00000330188 SAT2Q96F10 170 aaPredicted RBP12.47□□□□□ -0.41
TPM3-206ENST00000330188 SMIM8Q96KF7 97 aa12.47□□□□□ -0.41
TPM3-206ENST00000330188 TP53RKQ96S44 253 aa12.47□□□□□ -0.41
TPM3-206ENST00000330188 PLEKHA2Q9HB19 425 aa12.47□□□□□ -0.41
TPM3-206ENST00000330188 TRGV5A0A0B4J1U4 118 aa12.47□□□□□ -0.41
TPM3-206ENST00000330188 E5RGE8 158 aa12.47□□□□□ -0.41
TPM3-206ENST00000330188 DNASE2O00115 360 aaPredicted RBP12.47□□□□□ -0.41
TPM3-206ENST00000330188 CDK2AP1O14519 115 aa12.47□□□□□ -0.41
TPM3-206ENST00000330188 NUPL2O15504 423 aaKnown RBP12.47□□□□□ -0.41
TPM3-206ENST00000330188 PHF1O43189 567 aaPredicted RBP12.47□□□□□ -0.41
TPM3-206ENST00000330188 GAPDHP04406 335 aaKnown RBP12.47□□□□□ -0.41
TPM3-206ENST00000330188 TMEM33P57088 247 aa12.47□□□□□ -0.41
TPM3-206ENST00000330188 SRSF3P84103 164 aaKnown RBP12.47□□□□□ -0.41
TPM3-206ENST00000330188 CLN3Q13286 438 aa12.47□□□□□ -0.41
TPM3-206ENST00000330188 ZNF766Q5HY98 468 aa12.47□□□□□ -0.41
TPM3-206ENST00000330188 BCL2L2Q92843 193 aaPredicted RBP12.47□□□□□ -0.41
TPM3-206ENST00000330188 HIST1H2AAQ96QV6 131 aa12.47□□□□□ -0.41
TPM3-206ENST00000330188 NSG2Q9Y328 171 aa12.47□□□□□ -0.41
TPM3-206ENST00000330188 CELSR3Q9NYQ7 3312 aa12.47□□□□□ -0.41
TPM3-206ENST00000330188 DIRAS3O95661 229 aa12.46□□□□□ -0.41
TPM3-206ENST00000330188 SCTP09683 121 aa12.46□□□□□ -0.41
TPM3-206ENST00000330188 ADCYAP1P18509 176 aa12.46□□□□□ -0.41
TPM3-206ENST00000330188 ATF4P18848 351 aaPredicted RBP12.46□□□□□ -0.41
TPM3-206ENST00000330188 DUSP1P28562 367 aa12.46□□□□□ -0.41
TPM3-206ENST00000330188 GNRHRP30968 328 aa12.46□□□□□ -0.41
TPM3-206ENST00000330188 KCNJ3P48549 501 aa12.46□□□□□ -0.41
TPM3-206ENST00000330188 SMUG1Q53HV7 270 aa12.46□□□□□ -0.41
TPM3-206ENST00000330188 FBXW9Q5XUX1 488 aa12.46□□□□□ -0.41
TPM3-206ENST00000330188 EIF5AL1Q6IS14 154 aaKnown RBP12.46□□□□□ -0.41
TPM3-206ENST00000330188 HAGHLQ6PII5 290 aaPredicted RBP12.46□□□□□ -0.41
TPM3-206ENST00000330188 IL34Q6ZMJ4 242 aa12.46□□□□□ -0.41
TPM3-206ENST00000330188 DPPA2Q7Z7J5 298 aa12.46□□□□□ -0.41
TPM3-206ENST00000330188 OR52M1Q8NGK5 317 aa12.46□□□□□ -0.41
TPM3-206ENST00000330188 ERGIC1Q969X5 290 aa12.46□□□□□ -0.41
TPM3-206ENST00000330188 C3orf85A0A1B0GTC6 90 aa12.46□□□□□ -0.42
TPM3-206ENST00000330188 SLC22A20A6NK97 555 aa12.46□□□□□ -0.42
TPM3-206ENST00000330188 ANKRD30BLA7E2S9 258 aa12.46□□□□□ -0.42
TPM3-206ENST00000330188 MPPED1O15442 326 aa12.46□□□□□ -0.42
TPM3-206ENST00000330188 ATG12O94817 140 aa12.46□□□□□ -0.42
TPM3-206ENST00000330188 PRKACAP17612 351 aa12.46□□□□□ -0.42
TPM3-206ENST00000330188 SPINK2P20155 84 aa12.46□□□□□ -0.42
TPM3-206ENST00000330188 SULT1A2P50226 295 aa12.46□□□□□ -0.42
TPM3-206ENST00000330188 NOVA1P51513 510 aaKnown RBP12.46□□□□□ -0.42
TPM3-206ENST00000330188 ARG2P78540 354 aa12.46□□□□□ -0.42
TPM3-206ENST00000330188 PJVKQ0ZLH3 352 aa12.46□□□□□ -0.42
TPM3-206ENST00000330188 HERPUD1Q15011 391 aa12.46□□□□□ -0.42
TPM3-206ENST00000330188 TSC22D1Q15714 1073 aa12.46□□□□□ -0.42
TPM3-206ENST00000330188 MDP1Q86V88 176 aa12.46□□□□□ -0.42
TPM3-206ENST00000330188 LDLRAD3Q86YD5 345 aa12.46□□□□□ -0.42
TPM3-206ENST00000330188 FAM185AQ8N0U4 392 aa12.46□□□□□ -0.42
TPM3-206ENST00000330188 SMIM3Q9BZL3 60 aa12.46□□□□□ -0.42
TPM3-206ENST00000330188 NKX6-2Q9C056 277 aaPredicted RBP12.46□□□□□ -0.42
TPM3-206ENST00000330188 OR51B6Q9H340 312 aa12.46□□□□□ -0.42
TPM3-206ENST00000330188 PLA2G2EQ9NZK7 142 aa12.46□□□□□ -0.42
TPM3-206ENST00000330188 FBXO9Q9UK97 447 aaPredicted RBP12.46□□□□□ -0.42
TPM3-206ENST00000330188 MPC1Q9Y5U8 109 aa12.46□□□□□ -0.42
TPM3-206ENST00000330188 HSPB6O14558 160 aa12.45□□□□□ -0.42
TPM3-206ENST00000330188 JTBO76095 146 aa12.45□□□□□ -0.42
TPM3-206ENST00000330188 FBXW12Q6X9E4 464 aa12.45□□□□□ -0.42
TPM3-206ENST00000330188 SLC35G3Q8N808 338 aa12.45□□□□□ -0.42
TPM3-206ENST00000330188 BSCL2Q96G97 398 aaPredicted RBP12.45□□□□□ -0.42
TPM3-206ENST00000330188 ZNF488Q96MN9 340 aa12.45□□□□□ -0.42
TPM3-206ENST00000330188 ZDHHC11Q9H8X9 412 aa12.45□□□□□ -0.42
TPM3-206ENST00000330188 ZDHHC8Q9ULC8 765 aa12.45□□□□□ -0.42
TPM3-206ENST00000330188 TMED3Q9Y3Q3 217 aa12.45□□□□□ -0.42
TPM3-206ENST00000330188 DOCK7Q96N67 2140 aa12.45□□□□□ -0.42
TPM3-206ENST00000330188 ARID1AO14497 2285 aa12.45□□□□□ -0.42
TPM3-206ENST00000330188 OR5B21A6NL26 309 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 TK1P04183 234 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 LPAR6P43657 344 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 RND3P61587 244 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 GNG3P63215 75 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 CLEC9AQ6UXN8 241 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 MEX3BQ6ZN04 569 aaKnown RBP12.44□□□□□ -0.42
TPM3-206ENST00000330188 TMPRSS7Q7RTY8 843 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 LINC00596Q86U02 117 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 OR4D5Q8NGN0 318 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 NANOS1Q8WY41 292 aaKnown RBP12.44□□□□□ -0.42
TPM3-206ENST00000330188 HRH4Q9H3N8 390 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 PLK3Q9H4B4 646 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 GP6Q9HCN6 339 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 LHX6Q9UPM6 363 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 ESPL1Q14674 2120 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 IGKV1-6A0A0C4DH72 117 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 PCNX2A6NKB5 2137 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 FAM74A7A6NL05 159 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 TRIM77I1YAP6 450 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 GPR31O00270 319 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 FBXO24O75426 580 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 MED6O75586 246 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 TUSC2O75896 110 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 GLAP06280 429 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 IL13RA2Q14627 380 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 TRIP6Q15654 476 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms