RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 RTP5Q14D33 572 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 TMEM41BQ5BJD5 291 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 CT45A2Q5DJT8 189 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 LRRC69Q6ZNQ3 347 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 CDC20BQ86Y33 519 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 OR8G5Q8NG78 346 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 OR4S2Q8NH73 311 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 FNDC9Q8TBE3 224 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 ZNF576Q9H609 170 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 SMPXQ9UHP9 88 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 TUBD1Q9UJT1 453 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 DOCK9Q9BZ29 2069 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 FANCMQ8IYD8 2048 aa10.33□□□□□ -0.76
SHMT2-201ENST00000328923 A0A1W2PNV4 684 aa10.33□□□□□ -0.76
SHMT2-201ENST00000328923 E5RGE8 158 aa10.33□□□□□ -0.76
SHMT2-201ENST00000328923 SUMO1P63165 101 aaKnown RBP10.33□□□□□ -0.76
SHMT2-201ENST00000328923 TMEM52BQ4KMG9 183 aa10.33□□□□□ -0.76
SHMT2-201ENST00000328923 FDX2Q6P4F2 183 aa10.33□□□□□ -0.76
SHMT2-201ENST00000328923 MRPL24Q96A35 216 aaKnown RBP10.33□□□□□ -0.76
SHMT2-201ENST00000328923 CYYR1Q96J86 154 aa10.33□□□□□ -0.76
SHMT2-201ENST00000328923 OR5B12Q96R08 314 aa10.33□□□□□ -0.76
SHMT2-201ENST00000328923 Q9N2K0 584 aa10.33□□□□□ -0.76
SHMT2-201ENST00000328923 EHFQ9NZC4 300 aa10.33□□□□□ -0.76
SHMT2-201ENST00000328923 NSG2Q9Y328 171 aa10.33□□□□□ -0.76
SHMT2-201ENST00000328923 FAM230AA0A1W2PPH8 454 aa10.33□□□□□ -0.76
SHMT2-201ENST00000328923 GAGE12BA1L429 117 aa10.33□□□□□ -0.76
SHMT2-201ENST00000328923 PPIAL4GP0DN37 164 aa10.33□□□□□ -0.76
SHMT2-201ENST00000328923 CPMP14384 443 aa10.33□□□□□ -0.76
SHMT2-201ENST00000328923 RPS27P42677 84 aaKnown RBP10.33□□□□□ -0.76
SHMT2-201ENST00000328923 GAB4Q2WGN9 574 aa10.33□□□□□ -0.76
SHMT2-201ENST00000328923 OR10G4Q8NGN3 311 aa10.33□□□□□ -0.76
SHMT2-201ENST00000328923 BTF3L4Q96K17 158 aa10.33□□□□□ -0.76
SHMT2-201ENST00000328923 SLC46A1Q96NT5 459 aa10.33□□□□□ -0.76
SHMT2-201ENST00000328923 ABHD6Q9BV23 337 aa10.33□□□□□ -0.76
SHMT2-201ENST00000328923 RYDENQ9NUL5 291 aaKnown RBP10.33□□□□□ -0.76
SHMT2-201ENST00000328923 PLA2G3Q9NZ20 509 aa10.33□□□□□ -0.76
SHMT2-201ENST00000328923 GRIFINA4D1Z8 144 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 ZFP92A6NM28 416 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 H7BYZ3 331 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 CDS2O95674 445 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 TSPOP30536 169 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 TPPP2P59282 170 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 SHBQ15464 509 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 PPP1R14AQ96A00 147 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 FAM46BQ96A09 425 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 TSSK2Q96PF2 358 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 PLK3Q9H4B4 646 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 PATZ1Q9HBE1 687 aaKnown RBP10.32□□□□□ -0.76
SHMT2-201ENST00000328923 FBXO34Q9NWN3 711 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 DNAJB12Q9NXW2 375 aaKnown RBP10.32□□□□□ -0.76
SHMT2-201ENST00000328923 TAS2R4Q9NYW5 299 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 BDP1A6H8Y1 2624 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 KIAA2026Q5HYC2 2103 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 MUC22E2RYF6 1773 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-201ENST00000328923 A0A1B0GV72 72 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 GPR89AB7ZAQ6 455 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 NUDT21O43809 227 aaKnown RBP10.32□□□□□ -0.76
SHMT2-201ENST00000328923 SEMA4FO95754 770 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 SERPINA7P05543 415 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 GPR89BP0CG08 455 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 GRK6P43250 576 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 METAP1P53582 386 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 PRRX1P54821 245 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 NSDHLQ15738 373 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 MLF2Q15773 248 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-201ENST00000328923 OR52R1Q8NGF1 315 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 OR1N2Q8NGR9 330 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 RASD2Q96D21 266 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 C4orf45Q96LM5 186 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 MRPL13Q9BYD1 178 aaKnown RBP10.32□□□□□ -0.76
SHMT2-201ENST00000328923 G6PC2Q9NQR9 355 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 DEC1Q9P2X7 70 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 TMEM14AQ9Y6G1 99 aa10.32□□□□□ -0.76
SHMT2-201ENST00000328923 GALR2O43603 387 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-201ENST00000328923 HRASP01112 189 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 PTGER4P35408 488 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 CEACAM3P40198 252 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 SLAQ13239 276 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 RAB30Q15771 203 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 WDR38Q5JTN6 314 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 C1QL3Q5VWW1 255 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 TMEM225Q6GV28 225 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 C1orf174Q8IYL3 243 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 OR10W1Q8NGF6 305 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 NT5CQ8TCD5 201 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 OR1E3Q8WZA6 343 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 RBMXL1Q96E39 390 aaKnown RBP10.31□□□□□ -0.76
SHMT2-201ENST00000328923 NKX2-4Q9H2Z4 354 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 TRAV26-1A0A087WT03 109 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 NSG1A0A0A6YYJ2 146 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 OR7C2O60412 319 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 ALOX5APP20292 161 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 CRYBA4P53673 196 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 SEC13P55735 322 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 LINC00310P59036 64 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 HNRNPA1L2Q32P51 320 aaKnown RBP10.31□□□□□ -0.76
SHMT2-201ENST00000328923 TRMT12Q53H54 448 aaKnown RBP10.31□□□□□ -0.76
SHMT2-201ENST00000328923 AMMECR1LQ6DCA0 310 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 FCRL6Q6DN72 434 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 PTCRAQ6ISU1 281 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms