RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 Q6ZPA2 131 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 Q6ZSR3 168 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 ZNF695Q8IW36 515 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 CCDC71LQ8N9Z2 235 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 RGCCQ9H4X1 137 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 SPACA1Q9HBV2 294 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 CRIM1Q9NZV1 1036 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 ZNF175Q9Y473 711 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 DNPH1O43598 174 aa12.11□□□□□ -0.47
ATP2C1-201ENST00000328560 GAPDHP04406 335 aaKnown RBP12.11□□□□□ -0.47
ATP2C1-201ENST00000328560 PLGLB1Q02325 96 aa12.11□□□□□ -0.47
ATP2C1-201ENST00000328560 MRPL21Q7Z2W9 205 aaKnown RBP12.11□□□□□ -0.47
ATP2C1-201ENST00000328560 ISOC2Q96AB3 205 aa12.11□□□□□ -0.47
ATP2C1-201ENST00000328560 MSI2Q96DH6 328 aaKnown RBP12.11□□□□□ -0.47
ATP2C1-201ENST00000328560 TAAR9Q96RI9 348 aa12.11□□□□□ -0.47
ATP2C1-201ENST00000328560 CLCC1Q96S66 551 aa12.11□□□□□ -0.47
ATP2C1-201ENST00000328560 HSD17B6O14756 317 aa12.11□□□□□ -0.47
ATP2C1-201ENST00000328560 GPR137BO60478 399 aa12.11□□□□□ -0.47
ATP2C1-201ENST00000328560 SCTP09683 121 aa12.11□□□□□ -0.47
ATP2C1-201ENST00000328560 GNRHRP30968 328 aa12.11□□□□□ -0.47
ATP2C1-201ENST00000328560 TMEM42Q69YG0 159 aa12.11□□□□□ -0.47
ATP2C1-201ENST00000328560 VASH2Q86V25 355 aa12.11□□□□□ -0.47
ATP2C1-201ENST00000328560 UBAC2Q8NBM4 344 aa12.11□□□□□ -0.47
ATP2C1-201ENST00000328560 MOB3AQ96BX8 217 aa12.11□□□□□ -0.47
ATP2C1-201ENST00000328560 ZPBPQ9BS86 351 aa12.11□□□□□ -0.47
ATP2C1-201ENST00000328560 DECR2Q9NUI1 292 aa12.11□□□□□ -0.47
ATP2C1-201ENST00000328560 LUZP4Q9P127 313 aa12.11□□□□□ -0.47
ATP2C1-201ENST00000328560 C3orf85A0A1B0GTC6 90 aa12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 GLAP06280 429 aa12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 PRDX4Q13162 271 aa12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 GUK1Q16774 197 aa12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 LINC00696Q6ZRV3 163 aa12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 TUSC5Q8IXB3 177 aa12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 TMEM217Q8N7C4 229 aa12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 GALNT14Q96FL9 552 aa12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 PLA2G3Q9NZ20 509 aa12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 H7C1Q1 480 aa12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 MPPED1O15442 326 aa12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 CD5P06127 495 aa12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 OR13C7P0DN81 318 aa12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 C3AR1Q16581 482 aa12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 KRBOX4Q5JUW0 171 aa12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 MCEMP1Q8IX19 187 aa12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 TMEM105Q8N8V8 129 aa12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 CPNE4Q96A23 557 aaPredicted RBP12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 ZNF488Q96MN9 340 aa12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 ZDHHC8Q9ULC8 765 aa12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 MEX3AA1L020 520 aaKnown RBP12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 SSSCA1O60232 199 aa12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 SYNGR4O95473 234 aa12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 IGFBP7Q16270 282 aa12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 DPPA2Q7Z7J5 298 aa12.1□□□□□ -0.47
ATP2C1-201ENST00000328560 C19orf67A6NJJ6 358 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 ZNF732B4DXR9 585 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 NGFP01138 241 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 TK1P04183 234 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 TBC1D26Q86UD7 250 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 ADGRG7Q96K78 797 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 C18orf12Q96KH6 178 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 C19orf12Q9NSK7 152 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 IGHV3-64DA0A0J9YX35 117 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 HS3ST1O14792 307 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 CST7O76096 145 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 CBR1P16152 277 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 OR8B8Q15620 311 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 ABLIM2Q6H8Q1 611 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 RDH5Q92781 318 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 BIN3Q9NQY0 253 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 SMCO4Q9NRQ5 59 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 TERTO14746 1132 aaKnown RBP12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 GPR37O15354 613 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 NDUFA2O43678 99 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 MMP7P09237 267 aaPredicted RBP12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 ZNF44P15621 663 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 EPHA1P21709 976 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 ACP1P24666 158 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 NKX2-1P43699 371 aaPredicted RBP12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 VAMP2P63027 116 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 CXorf66Q5JRM2 361 aaPredicted RBP12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 ASCL4Q6XD76 172 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 GAPTQ8N292 157 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 IP6K3Q96PC2 410 aa12.09□□□□□ -0.47
ATP2C1-201ENST00000328560 H2AFB1P0C5Y9 115 aa12.08□□□□□ -0.48
ATP2C1-201ENST00000328560 P2RY1P47900 373 aa12.08□□□□□ -0.48
ATP2C1-201ENST00000328560 RIPPLY2Q5TAB7 128 aa12.08□□□□□ -0.48
ATP2C1-201ENST00000328560 TMEM211Q6ICI0 200 aa12.08□□□□□ -0.48
ATP2C1-201ENST00000328560 SIGLEC12Q96PQ1 595 aa12.08□□□□□ -0.48
ATP2C1-201ENST00000328560 HIST1H2AAQ96QV6 131 aa12.08□□□□□ -0.48
ATP2C1-201ENST00000328560 NCKAP5O14513 1909 aa12.08□□□□□ -0.48
ATP2C1-201ENST00000328560 DOCK10Q96BY6 2186 aa12.08□□□□□ -0.48
ATP2C1-201ENST00000328560 CDRT15L2A8MXV6 281 aa12.08□□□□□ -0.48
ATP2C1-201ENST00000328560 ADAM20O43506 726 aa12.08□□□□□ -0.48
ATP2C1-201ENST00000328560 CYTIPO60759 359 aa12.08□□□□□ -0.48
ATP2C1-201ENST00000328560 PPP1CCP36873 323 aaKnown RBP12.08□□□□□ -0.48
ATP2C1-201ENST00000328560 EWSR1Q01844 656 aaKnown RBP eCLIP12.08□□□□□ -0.48
ATP2C1-201ENST00000328560 AWAT1Q58HT5 328 aa12.08□□□□□ -0.48
ATP2C1-201ENST00000328560 IL22RA1Q8N6P7 574 aa12.08□□□□□ -0.48
ATP2C1-201ENST00000328560 ZFP62Q8NB50 900 aaPredicted RBP12.08□□□□□ -0.48
ATP2C1-201ENST00000328560 DMBX1Q8NFW5 382 aa12.08□□□□□ -0.48
ATP2C1-201ENST00000328560 C12orf57Q99622 126 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms