RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 OR1A1Q9P1Q5 309 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 APOBEC3BQ9UH17 382 aaKnown RBP6.27□□□□□ -1.41
SMC1A-201ENST00000322213 ST6GALNAC2Q9UJ37 374 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 K7ESM1 405 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 DHRS3O75911 302 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 OR5G3P0C626 314 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 RPS4Y1P22090 263 aaKnown RBP6.27□□□□□ -1.41
SMC1A-201ENST00000322213 TGFBR3Q03167 851 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 TMEM176BQ3YBM2 270 aaPredicted RBP6.27□□□□□ -1.41
SMC1A-201ENST00000322213 VAX1Q5SQQ9 334 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 MMACHCQ9Y4U1 282 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 TRBV11-1A0A0K0K1C0 115 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 HAND1O96004 215 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 SCGB1C2P0DMR2 95 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 OR3A4PP47883 348 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 RHOBP62745 196 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 SERF2P84101 59 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 KISS1Q15726 138 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 HLA-DRB5Q30154 266 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 OR4N2Q8NGD1 307 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 FGF14Q92915 247 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 LINC00615Q96LM1 132 aaPredicted RBP6.27□□□□□ -1.41
SMC1A-201ENST00000322213 LINC00597Q9H2U6 94 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 MCTS1Q9ULC4 181 aaKnown RBP6.27□□□□□ -1.41
SMC1A-201ENST00000322213 NPTNQ9Y639 398 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 LILRA3Q8N6C8 439 aaPredicted RBP6.27□□□□□ -1.41
SMC1A-201ENST00000322213 OR52L2PQ8NGH6 319 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 WNT2BQ93097 391 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 GMPPAQ96IJ6 420 aaPredicted RBP6.27□□□□□ -1.41
SMC1A-201ENST00000322213 HSPB9Q9BQS6 159 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 B9D1Q9UPM9 204 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 ASCL1P50553 236 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 CLEC2AQ6UVW9 174 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 TNFRSF14Q92956 283 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 PKIBQ9C010 78 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 WDR61Q9GZS3 305 aaKnown RBP6.27□□□□□ -1.41
SMC1A-201ENST00000322213 DTX4Q9Y2E6 619 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 DHRS7CA6NNS2 312 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 SIRPB1O00241 398 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 ZNF573Q86YE8 665 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 OR8G5Q8NG78 346 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 ABHD14BQ96IU4 210 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 C4orf45Q96LM5 186 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 CDCA3Q99618 268 aaPredicted RBP6.27□□□□□ -1.41
SMC1A-201ENST00000322213 MRM2Q9UI43 246 aaKnown RBP6.27□□□□□ -1.41
SMC1A-201ENST00000322213 H3BP45 60 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 FUT3P21217 361 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 MDH2P40926 338 aaKnown RBP6.27□□□□□ -1.41
SMC1A-201ENST00000322213 PPICP45877 212 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 SUCLG1P53597 346 aaKnown RBP6.27□□□□□ -1.41
SMC1A-201ENST00000322213 SRYQ05066 204 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 SP6Q3SY56 376 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 MARCH3Q86UD3 253 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 ZCCHC14Q8WYQ9 949 aaKnown RBP6.27□□□□□ -1.41
SMC1A-201ENST00000322213 APOOQ9BUR5 198 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 SETD2Q9BYW2 2564 aaPredicted RBP6.27□□□□□ -1.41
SMC1A-201ENST00000322213 LTBP3Q9NS15 1303 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 RHBDL1O75783 438 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 KLK2P20151 261 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 LAIR2Q6ISS4 152 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 LINC01465Q8N7H1 131 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 BCL2L2Q92843 193 aaPredicted RBP6.26□□□□□ -1.41
SMC1A-201ENST00000322213 PGLYRP3Q96LB9 341 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 SAP30LQ9HAJ7 183 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 DNAJB12Q9NXW2 375 aaKnown RBP6.26□□□□□ -1.41
SMC1A-201ENST00000322213 KLK13Q9UKR3 277 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 A0A1W2PN81 502 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 FAM24AA6NFZ4 105 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 DLEU1O43261 78 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 CDS2O95674 445 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 TIMP1P01033 207 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 MT-ND6P03923 174 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 RAC1P63000 192 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 NPEPL1Q8NDH3 523 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 MISP3Q96FF7 219 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 MMP25Q9NPA2 562 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 SLC22A20A6NK97 555 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 CXorf1O96002 111 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 ZP1P60852 638 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 ARSJQ5FYB0 599 aaPredicted RBP6.26□□□□□ -1.41
SMC1A-201ENST00000322213 KLHDC9Q8NEP7 349 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 PTPMT1Q8WUK0 201 aaPredicted RBP6.26□□□□□ -1.41
SMC1A-201ENST00000322213 TMEM147Q9BVK8 224 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 HEXA-AS1Q9H8Q6 139 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 CISD1Q9NZ45 108 aaKnown RBP6.26□□□□□ -1.41
SMC1A-201ENST00000322213 AQP7P3A6NL99 342 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 BMPR1BO00238 502 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 SH2D1BO14796 132 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 KLKB1P03952 638 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 MMP9P14780 707 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 RFLNAQ6ZTI6 216 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 GALMQ96C23 342 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 C10orf35Q96D05 121 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 CES1P1Q9UKY3 287 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 SRPK3Q9UPE1 567 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 KCNE3Q9Y6H6 103 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 TMIGD3P0DMS9 266 aaPredicted RBP6.26□□□□□ -1.41
SMC1A-201ENST00000322213 FUT6P51993 359 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 DHRS13Q6UX07 377 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 LIAT1Q6ZQX7 453 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms