RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 PTPRFP10586 1907 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 TCTAP57738 103 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 TBC1D26Q86UD7 250 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 OR1N2Q8NGR9 330 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 DOK5Q9P104 306 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 HCSTQ9UBK5 93 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 TRBV5-4A0A0C4DH59 114 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 MED19A0JLT2 244 aaPredicted RBP15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 DEFB108AA8MXU0 73 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 SMPD2O60906 423 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 COL8A1P27658 744 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 CCR5P51681 352 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 TMEM65Q6PI78 240 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 CNTD2Q9H8S5 307 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 TMEM38BQ9NVV0 291 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 LINC01553A4QN01 128 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 MTURNQ8N3F0 131 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 FGF14Q92915 247 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 MOGAT1Q96PD6 335 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 ZNF275Q9NSD4 429 aaPredicted RBP15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 ADTRPQ96IZ2 230 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 CEP250Q9BV73 2442 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 TCRBV16S1A1N1A0A5B0 115 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 MCHR2Q969V1 340 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 LPAR5Q9H1C0 372 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 NEU3Q9UQ49 428 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 DOPEY2Q9Y3R5 2298 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 NSUN5P2Q63ZY6 315 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 OR5B21A6NL26 309 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 IGLV3-27P01718 113 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 CXorf67Q86X51 503 aaPredicted RBP15□□□□□ -0.01
SMCHD1-201ENST00000320876 H3BQ15 152 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 CXCL13O43927 109 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 SRSF10O75494 262 aaKnown RBP15□□□□□ -0.01
SMCHD1-201ENST00000320876 MRGPRGQ86SM5 289 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 LHFPL5Q8TAF8 219 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 COPS9Q8WXC6 57 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 ST6GAL2Q96JF0 529 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 QSER1Q2KHR3 1735 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 SPINK9Q5DT21 86 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 FAM109BQ6ICB4 259 aaPredicted RBP15□□□□□ -0.01
SMCHD1-201ENST00000320876 VSTM2AQ8TAG5 236 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 MTCH2Q9Y6C9 303 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 SPRY3O43610 288 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 MPV17LQ2QL34 196 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 OR6C3Q9NZP0 311 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 GEMIN2O14893 280 aaKnown RBP15□□□□□ -0.01
SMCHD1-201ENST00000320876 HFEQ30201 348 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 NPEPL1Q8NDH3 523 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 OR13G1Q8NGZ3 307 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 RAB37Q96AX2 223 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 CA10Q9NS85 328 aa15□□□□□ -0.01
SMCHD1-201ENST00000320876 ALG1L2C9J202 215 aa14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 RPL34P49207 117 aaKnown RBP14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 C12orf54Q6X4T0 127 aa14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 FOXB1Q99853 325 aa14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 GPR61Q9BZJ8 451 aa14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 PARP11Q9NR21 331 aa14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 GREB1Q4ZG55 1949 aa14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 OR5R1Q8NH85 324 aa14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 ZNF707Q96C28 371 aaPredicted RBP14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 ANXA10Q9UJ72 324 aa14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 CTSDP07339 412 aaPredicted RBP14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 CD226Q15762 336 aa14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 RER1O15258 196 aa14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 INSL4Q14641 139 aa14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 SH2D5Q6ZV89 423 aa14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 TRILQ7L0X0 811 aa14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 C10orf35Q96D05 121 aa14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 CA2P00918 260 aa14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 AMMECR1LQ6DCA0 310 aa14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 ZNF788Q6ZQV5 615 aa14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 SLC25A42Q86VD7 318 aa14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 COL25A1Q9BXS0 654 aaPredicted RBP14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 OOEPA6NGQ2 149 aa14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 DMRTC1Q5HYR2 192 aa14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 ETFBKMTQ8IXQ9 262 aa14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 CA5BP1Q8WTZ4 195 aa14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 RSG1Q9BU20 258 aa14.99□□□□□ -0.01
SMCHD1-201ENST00000320876 STXBP6Q8NFX7 210 aa14.98□□□□□ -0.01
SMCHD1-201ENST00000320876 CNRIP1Q96F85 164 aaPredicted RBP14.98□□□□□ -0.01
SMCHD1-201ENST00000320876 NPTNQ9Y639 398 aa14.98□□□□□ -0.01
SMCHD1-201ENST00000320876 LINC00862A6NCI5 91 aa14.98□□□□□ -0.01
SMCHD1-201ENST00000320876 LBX1P52954 281 aa14.98□□□□□ -0.01
SMCHD1-201ENST00000320876 ZXDAP98168 799 aa14.98□□□□□ -0.01
SMCHD1-201ENST00000320876 CRHP06850 196 aa14.98□□□□□ -0.01
SMCHD1-201ENST00000320876 CA6P23280 308 aa14.98□□□□□ -0.01
SMCHD1-201ENST00000320876 PLP1P60201 277 aa14.98□□□□□ -0.01
SMCHD1-201ENST00000320876 GABRA6Q16445 453 aa14.98□□□□□ -0.01
SMCHD1-201ENST00000320876 SLC25A33Q9BSK2 321 aa14.98□□□□□ -0.01
SMCHD1-201ENST00000320876 MRPL13Q9BYD1 178 aaKnown RBP14.98□□□□□ -0.01
SMCHD1-201ENST00000320876 CEACAM3P40198 252 aa14.98□□□□□ -0.01
SMCHD1-201ENST00000320876 LGALS7P47929 136 aa14.98□□□□□ -0.01
SMCHD1-201ENST00000320876 PIPOXQ9P0Z9 390 aa14.98□□□□□ -0.01
SMCHD1-201ENST00000320876 OTPQ5XKR4 325 aa14.98□□□□□ -0.01
SMCHD1-201ENST00000320876 ASB16Q96NS5 453 aa14.98□□□□□ -0.01
SMCHD1-201ENST00000320876 hADV38S2A0JD32 116 aa14.97□□□□□ -0.01
SMCHD1-201ENST00000320876 SMUG1Q53HV7 270 aa14.97□□□□□ -0.01
SMCHD1-201ENST00000320876 TBX15Q96SF7 602 aa14.97□□□□□ -0.01
SMCHD1-201ENST00000320876 MIEN1Q9BRT3 115 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms