RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 OR14J1Q9UGF5 321 aa10.58□□□□□ -0.72
SYCN-201ENST00000318438 DIMT1Q9UNQ2 313 aaKnown RBP10.58□□□□□ -0.72
SYCN-201ENST00000318438 TRBV2A0A0J9YWF9 115 aa10.57□□□□□ -0.72
SYCN-201ENST00000318438 RBMY1BA6NDE4 496 aaKnown RBP10.57□□□□□ -0.72
SYCN-201ENST00000318438 RBMY1EA6NEQ0 496 aaKnown RBP10.57□□□□□ -0.72
SYCN-201ENST00000318438 F8VVB4 439 aa10.57□□□□□ -0.72
SYCN-201ENST00000318438 F8VWA3 439 aa10.57□□□□□ -0.72
SYCN-201ENST00000318438 CYB5AP00167 134 aa10.57□□□□□ -0.72
SYCN-201ENST00000318438 RBMY1DP0C7P1 496 aaKnown RBP10.57□□□□□ -0.72
SYCN-201ENST00000318438 OCM2P0CE71 109 aa10.57□□□□□ -0.72
SYCN-201ENST00000318438 OCMP0CE72 109 aaPredicted RBP10.57□□□□□ -0.72
SYCN-201ENST00000318438 MYL12AP19105 171 aa10.57□□□□□ -0.72
SYCN-201ENST00000318438 CAPGP40121 348 aa10.57□□□□□ -0.72
SYCN-201ENST00000318438 VDAC2P45880 294 aaPredicted RBP10.57□□□□□ -0.72
SYCN-201ENST00000318438 ETV1P50549 477 aa10.57□□□□□ -0.72
SYCN-201ENST00000318438 MTCP1P56278 107 aa10.57□□□□□ -0.72
SYCN-201ENST00000318438 BLMHQ13867 455 aa10.57□□□□□ -0.72
SYCN-201ENST00000318438 AANATQ16613 207 aa10.57□□□□□ -0.72
SYCN-201ENST00000318438 TMPRSS11AQ6ZMR5 421 aa10.57□□□□□ -0.72
SYCN-201ENST00000318438 TMEM219Q86XT9 240 aa10.57□□□□□ -0.72
SYCN-201ENST00000318438 MRPL41Q8IXM3 137 aaKnown RBP10.57□□□□□ -0.72
SYCN-201ENST00000318438 MKXQ8IYA7 352 aa10.57□□□□□ -0.72
SYCN-201ENST00000318438 OR13C9Q8NGT0 318 aa10.57□□□□□ -0.72
SYCN-201ENST00000318438 PDCD1LG2Q9BQ51 273 aa10.57□□□□□ -0.72
SYCN-201ENST00000318438 PRSS22Q9GZN4 317 aa10.57□□□□□ -0.72
SYCN-201ENST00000318438 DCLRE1BQ9H816 532 aa10.57□□□□□ -0.72
SYCN-201ENST00000318438 NEK6Q9HC98 313 aa10.57□□□□□ -0.72
SYCN-201ENST00000318438 C19orf12Q9NSK7 152 aa10.57□□□□□ -0.72
SYCN-201ENST00000318438 SF3B6Q9Y3B4 125 aaKnown RBP10.57□□□□□ -0.72
SYCN-201ENST00000318438 TSSC4Q9Y5U2 329 aaPredicted RBP10.57□□□□□ -0.72
SYCN-201ENST00000318438 A0A1W2PPH5 198 aa10.56□□□□□ -0.72
SYCN-201ENST00000318438 TK1P04183 234 aa10.56□□□□□ -0.72
SYCN-201ENST00000318438 POU3F4P49335 361 aa10.56□□□□□ -0.72
SYCN-201ENST00000318438 RAB13P51153 203 aa10.56□□□□□ -0.72
SYCN-201ENST00000318438 RPL31P62899 125 aaKnown RBP10.56□□□□□ -0.72
SYCN-201ENST00000318438 PDZK1IP1Q13113 114 aa10.56□□□□□ -0.72
SYCN-201ENST00000318438 CDK5R1Q15078 307 aa10.56□□□□□ -0.72
SYCN-201ENST00000318438 PLA1AQ53H76 456 aa10.56□□□□□ -0.72
SYCN-201ENST00000318438 RPL22L1Q6P5R6 122 aaKnown RBP10.56□□□□□ -0.72
SYCN-201ENST00000318438 SERPINA12Q8IW75 414 aa10.56□□□□□ -0.72
SYCN-201ENST00000318438 C8orf59Q8N0T1 100 aaPredicted RBP10.56□□□□□ -0.72
SYCN-201ENST00000318438 FAM185AQ8N0U4 392 aa10.56□□□□□ -0.72
SYCN-201ENST00000318438 PARP16Q8N5Y8 322 aa10.56□□□□□ -0.72
SYCN-201ENST00000318438 OR5D14Q8NGL3 314 aa10.56□□□□□ -0.72
SYCN-201ENST00000318438 OR5D13Q8NGL4 314 aa10.56□□□□□ -0.72
SYCN-201ENST00000318438 RPS4Y2Q8TD47 263 aa10.56□□□□□ -0.72
SYCN-201ENST00000318438 TSEN15Q8WW01 171 aaKnown RBP10.56□□□□□ -0.72
SYCN-201ENST00000318438 EMG1Q92979 244 aaKnown RBP10.56□□□□□ -0.72
SYCN-201ENST00000318438 MYDGFQ969H8 173 aa10.56□□□□□ -0.72
SYCN-201ENST00000318438 PRR25Q96S07 402 aa10.56□□□□□ -0.72
SYCN-201ENST00000318438 ZCCHC4Q9H5U6 513 aa10.56□□□□□ -0.72
SYCN-201ENST00000318438 SEBOXQ9HB31 216 aaPredicted RBP10.56□□□□□ -0.72
SYCN-201ENST00000318438 DHDHQ9UQ10 334 aa10.56□□□□□ -0.72
SYCN-201ENST00000318438 EXOSC1Q9Y3B2 195 aaKnown RBP10.56□□□□□ -0.72
SYCN-201ENST00000318438 K7N7A8 449 aa10.55□□□□□ -0.72
SYCN-201ENST00000318438 SULT1B1O43704 296 aa10.55□□□□□ -0.72
SYCN-201ENST00000318438 ZNF737O75373 536 aa10.55□□□□□ -0.72
SYCN-201ENST00000318438 GNAO1P09471 354 aa10.55□□□□□ -0.72
SYCN-201ENST00000318438 PIPP12273 146 aaPredicted RBP10.55□□□□□ -0.72
SYCN-201ENST00000318438 BCL3P20749 454 aa10.55□□□□□ -0.72
SYCN-201ENST00000318438 NPBWR2P48146 333 aa10.55□□□□□ -0.72
SYCN-201ENST00000318438 GTF2A1P52655 376 aaPredicted RBP10.55□□□□□ -0.72
SYCN-201ENST00000318438 BLCAPP62952 87 aa10.55□□□□□ -0.72
SYCN-201ENST00000318438 MED21Q13503 144 aa10.55□□□□□ -0.72
SYCN-201ENST00000318438 KHDC1LQ5JSQ8 128 aa10.55□□□□□ -0.72
SYCN-201ENST00000318438 SPIN3Q5JUX0 258 aa10.55□□□□□ -0.72
SYCN-201ENST00000318438 OR2G6Q5TZ20 316 aa10.55□□□□□ -0.72
SYCN-201ENST00000318438 XAF1Q6GPH4 301 aa10.55□□□□□ -0.72
SYCN-201ENST00000318438 UNQ9370/PRO34162Q6UXP9 181 aa10.55□□□□□ -0.72
SYCN-201ENST00000318438 ETV3LQ6ZN32 361 aa10.55□□□□□ -0.72
SYCN-201ENST00000318438 ASCC1Q8N9N2 400 aaKnown RBP10.55□□□□□ -0.72
SYCN-201ENST00000318438 OR52N1Q8NH53 320 aa10.55□□□□□ -0.72
SYCN-201ENST00000318438 FBLIM1Q8WUP2 373 aa10.55□□□□□ -0.72
SYCN-201ENST00000318438 TMEM80Q96HE8 168 aa10.55□□□□□ -0.72
SYCN-201ENST00000318438 RBFOX1Q9NWB1 397 aaKnown RBP10.55□□□□□ -0.72
SYCN-201ENST00000318438 CNOT2Q9NZN8 540 aaKnown RBP10.55□□□□□ -0.72
SYCN-201ENST00000318438 INMTO95050 263 aa10.54□□□□□ -0.72
SYCN-201ENST00000318438 HAND1O96004 215 aa10.54□□□□□ -0.72
SYCN-201ENST00000318438 ZNF146Q15072 292 aa10.54□□□□□ -0.72
SYCN-201ENST00000318438 TMEM200BQ69YZ2 307 aa10.54□□□□□ -0.72
SYCN-201ENST00000318438 SAXO1Q8IYX7 474 aa10.54□□□□□ -0.72
SYCN-201ENST00000318438 OR8H2Q8N162 312 aa10.54□□□□□ -0.72
SYCN-201ENST00000318438 FAM58AQ8N1B3 248 aa10.54□□□□□ -0.72
SYCN-201ENST00000318438 OR4M1Q8NGD0 313 aa10.54□□□□□ -0.72
SYCN-201ENST00000318438 GPR148Q8TDV2 347 aa10.54□□□□□ -0.72
SYCN-201ENST00000318438 RGP1Q92546 391 aaPredicted RBP10.54□□□□□ -0.72
SYCN-201ENST00000318438 RFT1Q96AA3 541 aa10.54□□□□□ -0.72
SYCN-201ENST00000318438 SMIM19Q96E16 107 aa10.54□□□□□ -0.72
SYCN-201ENST00000318438 CPNE2Q96FN4 548 aaPredicted RBP10.54□□□□□ -0.72
SYCN-201ENST00000318438 SPACA5Q96QH8 159 aa10.54□□□□□ -0.72
SYCN-201ENST00000318438 RHOFQ9HBH0 211 aa10.54□□□□□ -0.72
SYCN-201ENST00000318438 CHCHD3Q9NX63 227 aaKnown RBP10.54□□□□□ -0.72
SYCN-201ENST00000318438 BABAM2Q9NXR7 383 aa10.54□□□□□ -0.72
SYCN-201ENST00000318438 IL36RNQ9UBH0 155 aa10.54□□□□□ -0.72
SYCN-201ENST00000318438 TCF19Q9Y242 345 aa10.54□□□□□ -0.72
SYCN-201ENST00000318438 IGKV1-12A0A0C4DH73 117 aa10.53□□□□□ -0.72
SYCN-201ENST00000318438 hCG_1809904A0A1W2PP81 198 aa10.53□□□□□ -0.72
SYCN-201ENST00000318438 A0A1W2PPE2 198 aa10.53□□□□□ -0.72
SYCN-201ENST00000318438 A0A1W2PR64 198 aa10.53□□□□□ -0.72
SYCN-201ENST00000318438 A0A1W2PRV1 198 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms