RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 MDH2P40926 338 aaKnown RBP12.98□□□□□ -0.33
HNF4A-202ENST00000316673 PLAC9Q5JTB6 97 aa12.98□□□□□ -0.33
HNF4A-202ENST00000316673 OLFML2AQ68BL7 652 aa12.98□□□□□ -0.33
HNF4A-202ENST00000316673 CLEC2AQ6UVW9 174 aa12.98□□□□□ -0.33
HNF4A-202ENST00000316673 Q6ZNX1 250 aa12.98□□□□□ -0.33
HNF4A-202ENST00000316673 ITLN1Q8WWA0 313 aa12.98□□□□□ -0.33
HNF4A-202ENST00000316673 ST8SIA4Q92187 359 aa12.98□□□□□ -0.33
HNF4A-202ENST00000316673 CMSS1Q9BQ75 279 aaKnown RBP12.98□□□□□ -0.33
HNF4A-202ENST00000316673 CHODLQ9H9P2 273 aa12.98□□□□□ -0.33
HNF4A-202ENST00000316673 NPTNQ9Y639 398 aa12.98□□□□□ -0.33
HNF4A-202ENST00000316673 CHD3Q12873 2000 aaKnown RBP12.98□□□□□ -0.33
HNF4A-202ENST00000316673 PDZD2O15018 2839 aa12.98□□□□□ -0.33
HNF4A-202ENST00000316673 MEIOCA2RUB1 952 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 NDUFS7O75251 213 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 DTYMKP23919 212 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 PDLIM4P50479 330 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 TMEM33P57088 247 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 TAS2R46P59540 309 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 ERVK11-1P61568 191 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 ZMYND11Q15326 602 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 STEAP1BQ6NZ63 245 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 CCBE1Q6UXH8 406 aaPredicted RBP12.97□□□□□ -0.33
HNF4A-202ENST00000316673 NRARPQ7Z6K4 114 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 WDR86Q86TI4 376 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 C1orf87Q8N0U7 546 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 DUSP18Q8NEJ0 188 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 Q8TCH9 128 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 NEK7Q8TDX7 302 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 GCDHQ92947 438 aaPredicted RBP12.97□□□□□ -0.33
HNF4A-202ENST00000316673 GCM1Q9NP62 436 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 MCUBQ9NWR8 336 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 C1orf123Q9NWV4 160 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 SCP2D1Q9UJQ7 156 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 DISC1C4P0D8 188 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 DEGS1O15121 323 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 RHBDL1O75783 438 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 KNG1P01042 644 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 IFNA6P05013 189 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 GUCA2AQ02747 115 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 ZNF146Q15072 292 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 RNASE10Q5GAN6 216 aaKnown RBP12.97□□□□□ -0.33
HNF4A-202ENST00000316673 PRAMEF6Q5VXH4 476 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 WDR82Q6UXN9 313 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 GDPD3Q7L5L3 318 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 C6orf201Q7Z4U5 140 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 PEG10Q86TG7 708 aaKnown RBP12.97□□□□□ -0.33
HNF4A-202ENST00000316673 TMEM17Q86X19 198 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 NUDCD2Q8WVJ2 157 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 FAM168AQ92567 244 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 HES4Q9HCC6 221 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 HRASLSQ9HDD0 168 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 C12orf4Q9NQ89 552 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 UFSP2Q9NUQ7 469 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 RCC2Q9P258 522 aaKnown RBP12.97□□□□□ -0.33
HNF4A-202ENST00000316673 MGAT4AQ9UM21 535 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 NUBP2Q9Y5Y2 271 aa12.97□□□□□ -0.33
HNF4A-202ENST00000316673 RAB3DO95716 219 aa12.96□□□□□ -0.34
HNF4A-202ENST00000316673 PTHLHP12272 177 aa12.96□□□□□ -0.34
HNF4A-202ENST00000316673 ZNF44P15621 663 aa12.96□□□□□ -0.34
HNF4A-202ENST00000316673 SLC6A1P30531 599 aa12.96□□□□□ -0.34
HNF4A-202ENST00000316673 KCNJ3P48549 501 aa12.96□□□□□ -0.34
HNF4A-202ENST00000316673 Q5PR19 223 aa12.96□□□□□ -0.34
HNF4A-202ENST00000316673 ZNF782Q6ZMW2 699 aaPredicted RBP12.96□□□□□ -0.34
HNF4A-202ENST00000316673 PPP1R35Q8TAP8 253 aa12.96□□□□□ -0.34
HNF4A-202ENST00000316673 LRRC29Q8WV35 223 aa12.96□□□□□ -0.34
HNF4A-202ENST00000316673 CCL17Q92583 94 aa12.96□□□□□ -0.34
HNF4A-202ENST00000316673 CREB3L1Q96BA8 519 aa12.96□□□□□ -0.34
HNF4A-202ENST00000316673 TIMD4Q96H15 378 aa12.96□□□□□ -0.34
HNF4A-202ENST00000316673 PRRT1Q99946 306 aa12.96□□□□□ -0.34
HNF4A-202ENST00000316673 SEBOXQ9HB31 216 aaPredicted RBP12.96□□□□□ -0.34
HNF4A-202ENST00000316673 CHMP1AQ9HD42 196 aaPredicted RBP12.96□□□□□ -0.34
HNF4A-202ENST00000316673 TREM2Q9NZC2 230 aa12.96□□□□□ -0.34
HNF4A-202ENST00000316673 RNF7Q9UBF6 113 aa12.96□□□□□ -0.34
HNF4A-202ENST00000316673 TEP1Q99973 2627 aaKnown RBP12.96□□□□□ -0.34
HNF4A-202ENST00000316673 NAT1P18440 290 aa12.95□□□□□ -0.34
HNF4A-202ENST00000316673 AMY2BP19961 511 aa12.95□□□□□ -0.34
HNF4A-202ENST00000316673 GIFP27352 417 aa12.95□□□□□ -0.34
HNF4A-202ENST00000316673 OR3A3P47888 321 aa12.95□□□□□ -0.34
HNF4A-202ENST00000316673 SNU13P55769 128 aaKnown RBP12.95□□□□□ -0.34
HNF4A-202ENST00000316673 SRSF7Q16629 238 aaKnown RBP eCLIP12.95□□□□□ -0.341e-7■■■■■ 37.8
HNF4A-202ENST00000316673 CLEC12BQ2HXU8 276 aa12.95□□□□□ -0.34
HNF4A-202ENST00000316673 MOGAT3Q86VF5 341 aa12.95□□□□□ -0.34
HNF4A-202ENST00000316673 HOGA1Q86XE5 327 aa12.95□□□□□ -0.34
HNF4A-202ENST00000316673 ZNF525Q8N782 197 aa12.95□□□□□ -0.34
HNF4A-202ENST00000316673 PIMREGQ9BSJ6 248 aa12.95□□□□□ -0.34
HNF4A-202ENST00000316673 TMEM106BQ9NUM4 274 aa12.95□□□□□ -0.34
HNF4A-202ENST00000316673 DNAJB11Q9UBS4 358 aa12.95□□□□□ -0.34
HNF4A-202ENST00000316673 KCNK7Q9Y2U2 307 aa12.95□□□□□ -0.34
HNF4A-202ENST00000316673 DYSFO75923 2080 aa12.94□□□□□ -0.34
HNF4A-202ENST00000316673 MEIS3P1A6NDR6 274 aa12.94□□□□□ -0.34
HNF4A-202ENST00000316673 SRRM5B3KS81 715 aa12.94□□□□□ -0.34
HNF4A-202ENST00000316673 RP2O75695 350 aa12.94□□□□□ -0.34
HNF4A-202ENST00000316673 LY6HO94772 140 aa12.94□□□□□ -0.34
HNF4A-202ENST00000316673 FSTL3O95633 263 aa12.94□□□□□ -0.34
HNF4A-202ENST00000316673 DHFRP00374 187 aa12.94□□□□□ -0.34
HNF4A-202ENST00000316673 CD74P04233 296 aa12.94□□□□□ -0.34
HNF4A-202ENST00000316673 COL8A2P25067 703 aa12.94□□□□□ -0.34
HNF4A-202ENST00000316673 RFX2P48378 723 aa12.94□□□□□ -0.34
HNF4A-202ENST00000316673 RIPPLY3P57055 190 aa12.94□□□□□ -0.34
HNF4A-202ENST00000316673 ARPC4P59998 168 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms