RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 ANXA10Q9UJ72 324 aa13.34□□□□□ -0.27
CALR-201ENST00000316448 ITGB1BP2Q9UKP3 347 aa13.34□□□□□ -0.27
CALR-201ENST00000316448 SDCBPO00560 298 aaPredicted RBP13.33□□□□□ -0.28
CALR-201ENST00000316448 TPD52L2O43399 206 aaKnown RBP13.33□□□□□ -0.28
CALR-201ENST00000316448 SLC22A5O76082 557 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 OR7C1O76099 320 aaPredicted RBP13.33□□□□□ -0.28
CALR-201ENST00000316448 SIX6O95475 246 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 NPY4RP50391 375 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 BSPH1Q075Z2 132 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 FBXL19-AS1Q494R0 122 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 PRAMEF6Q5VXH4 476 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 LPCAT3Q6P1A2 487 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 UXS1Q8NBZ7 420 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 TMEM185AQ8NFB2 350 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 OR5M8Q8NGP6 311 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 MRPL37Q9BZE1 423 aaKnown RBP13.33□□□□□ -0.28
CALR-201ENST00000316448 C12orf4Q9NQ89 552 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 SPEF1Q9Y4P9 236 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 IGLV3-9A0A075B6K5 115 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 ZSCAN5BA6NJL1 495 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 ABCD4O14678 606 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 PPP3CBP16298 524 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 PTAFRP25105 342 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 CD34P28906 385 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 UQCRFS1P47985 274 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 ERVK11-1P61568 191 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 SURF2Q15527 256 aaPredicted RBP13.33□□□□□ -0.28
CALR-201ENST00000316448 GRK1Q15835 563 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 MPV17LQ2QL34 196 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 ZNF660Q6AZW8 331 aaPredicted RBP13.33□□□□□ -0.28
CALR-201ENST00000316448 TMEM108Q6UXF1 575 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 Q6ZPA2 131 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 LINC01560Q8TB33 94 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 TMEM230Q96A57 120 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 CXXC4Q9H2H0 198 aa13.33□□□□□ -0.28
CALR-201ENST00000316448 NOP16Q9Y3C1 178 aaKnown RBP13.33□□□□□ -0.28
CALR-201ENST00000316448 DUS4LO95620 317 aaKnown RBP13.32□□□□□ -0.28
CALR-201ENST00000316448 PRKACAP17612 351 aa13.32□□□□□ -0.28
CALR-201ENST00000316448 HLA-GP17693 338 aa13.32□□□□□ -0.28
CALR-201ENST00000316448 IL13RA1P78552 427 aa13.32□□□□□ -0.28
CALR-201ENST00000316448 SRSF4Q08170 494 aaKnown RBP13.32□□□□□ -0.28
CALR-201ENST00000316448 LGALSLQ3ZCW2 172 aaPredicted RBP13.32□□□□□ -0.28
CALR-201ENST00000316448 TMEM128Q5BJH2 165 aa13.32□□□□□ -0.28
CALR-201ENST00000316448 C11orf88Q6PI97 169 aa13.32□□□□□ -0.28
CALR-201ENST00000316448 SCGB3A2Q96PL1 93 aa13.32□□□□□ -0.28
CALR-201ENST00000316448 DECR2Q9NUI1 292 aa13.32□□□□□ -0.28
CALR-201ENST00000316448 PLSCR5A0PG75 271 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 FAM221AA4D161 298 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 OR5H14A6NHG9 310 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 ARPC4P59998 168 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 GMFBP60983 142 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 LINC00596Q86U02 117 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 FAM58AQ8N1B3 248 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 RNASE6Q93091 150 aaKnown RBP13.31□□□□□ -0.28
CALR-201ENST00000316448 PHB2Q99623 299 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 RTBDNQ9BSG5 229 aaPredicted RBP13.31□□□□□ -0.28
CALR-201ENST00000316448 PLK3Q9H4B4 646 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 SMG1Q96Q15 3661 aaKnown RBP13.31□□□□□ -0.28
CALR-201ENST00000316448 ADGRG4Q8IZF6 3080 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 TMEM210A6NLX4 147 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 PGA5P0DJD9 388 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 AKR1C4P17516 323 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 VAMP1P23763 118 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 ECI1P42126 302 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 KLF3P57682 345 aaPredicted RBP13.31□□□□□ -0.28
CALR-201ENST00000316448 NDUFA5Q16718 116 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 NUP37Q8NFH4 326 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 OR2Z1Q8NG97 314 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 PRR7Q8TB68 274 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 NRIP2Q9BQI9 281 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 TLNRD1Q9H1K6 362 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 HEXA-AS1Q9H8Q6 139 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 RHOFQ9HBH0 211 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 UFSP2Q9NUQ7 469 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 COQ3Q9NZJ6 369 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 TAAR3PQ9P1P4 343 aa13.31□□□□□ -0.28
CALR-201ENST00000316448 ERRFI1Q9UJM3 462 aaPredicted RBP13.31□□□□□ -0.28
CALR-201ENST00000316448 ICE1Q9Y2F5 2266 aa13.3□□□□□ -0.28
CALR-201ENST00000316448 DBX1A6NMT0 343 aa13.3□□□□□ -0.28
CALR-201ENST00000316448 WNT9BO14905 357 aa13.3□□□□□ -0.28
CALR-201ENST00000316448 CD8AP01732 235 aa13.3□□□□□ -0.28
CALR-201ENST00000316448 GNLYP22749 145 aa13.3□□□□□ -0.28
CALR-201ENST00000316448 BAMBIQ13145 260 aa13.3□□□□□ -0.28
CALR-201ENST00000316448 SLC22A25Q6T423 547 aa13.3□□□□□ -0.28
CALR-201ENST00000316448 DMRTC2Q8IXT2 367 aaPredicted RBP13.3□□□□□ -0.28
CALR-201ENST00000316448 NEUROG1Q92886 237 aa13.3□□□□□ -0.28
CALR-201ENST00000316448 ZNF442Q9H7R0 627 aa13.3□□□□□ -0.28
CALR-201ENST00000316448 NECAP2Q9NVZ3 263 aa13.3□□□□□ -0.28
CALR-201ENST00000316448 SLC23A1Q9UHI7 598 aa13.3□□□□□ -0.28
CALR-201ENST00000316448 OR5H8P0DN80 308 aa13.29□□□□□ -0.28
CALR-201ENST00000316448 RPS2P15880 293 aaKnown RBP13.29□□□□□ -0.28
CALR-201ENST00000316448 ZNF81P51508 661 aa13.29□□□□□ -0.28
CALR-201ENST00000316448 SUPT4H1P63272 117 aaKnown RBP13.29□□□□□ -0.28
CALR-201ENST00000316448 IL13RA2Q14627 380 aa13.29□□□□□ -0.28
CALR-201ENST00000316448 ADAM5Q6NVV9 412 aa13.29□□□□□ -0.28
CALR-201ENST00000316448 Q6P435 159 aa13.29□□□□□ -0.28
CALR-201ENST00000316448 Q6ZS49 121 aa13.29□□□□□ -0.28
CALR-201ENST00000316448 C5orf24Q7Z6I8 188 aa13.29□□□□□ -0.28
CALR-201ENST00000316448 MRPL24Q96A35 216 aaKnown RBP13.29□□□□□ -0.28
CALR-201ENST00000316448 CNTNAP3BQ96NU0 1288 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms