RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 DYNLT3P51808 116 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 FHL5Q5TD97 284 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 CTRB2Q6GPI1 263 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 C17orf78Q8N4C9 275 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 UBAC2Q8NBM4 344 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 MRGPRDQ8TDS7 321 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 LRRC29Q8WV35 223 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 DUSP15Q9H1R2 295 aaPredicted RBP12.1□□□□□ -0.47
SPAST-201ENST00000315285 WDR54Q9H977 334 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 GPR35Q9HC97 309 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 IGHV3-43A0A0B4J1X8 118 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 RBFOX3A6NFN3 312 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 PHOX2AO14813 284 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 IGHV3-43DP0DP04 118 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 PIGYQ3MUY2 71 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 TRAT1Q6PIZ9 186 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 ZNF66Q6ZN08 573 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 GAPTQ8N292 157 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 MPGP29372 298 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 PRR27Q6MZM9 219 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 CBLN2Q8IUK8 224 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 CTHRC1Q96CG8 243 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 MS4A7Q9GZW8 240 aaPredicted RBP12.09□□□□□ -0.47
SPAST-201ENST00000315285 ZMIZ1Q9ULJ6 1067 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 PIN1P1O15428 100 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 DNPH1O43598 174 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 SYNGR2O43760 224 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 CRYABP02511 175 aaKnown RBP12.09□□□□□ -0.47
SPAST-201ENST00000315285 AWAT1Q58HT5 328 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 TMEM211Q6ICI0 200 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 FAM219AQ8IW50 185 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 LYG1Q8N1E2 194 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 SEC11CQ9BY50 192 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 SLC25A22Q9H936 323 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 KCNK7Q9Y2U2 307 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 ST8SIA5O15466 376 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 ZNF737O75373 536 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 BCL3P20749 454 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 ERVFC1-1P60608 527 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 MOGAT2Q3SYC2 334 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 LYZL2Q7Z4W2 148 aa12.09□□□□□ -0.47
SPAST-201ENST00000315285 PLXNA1Q9UIW2 1896 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 CHST1O43916 411 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 SCN4AP35499 1836 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 SPP1P10451 314 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 CNN1P51911 297 aaKnown RBP12.08□□□□□ -0.48
SPAST-201ENST00000315285 IFITM2Q01629 132 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 ETV3LQ6ZN32 361 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 TMEM37Q8WXS4 190 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 GINS3Q9BRX5 216 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 GNB4Q9HAV0 340 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 CCL28Q9NRJ3 127 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 AMDHD2Q9Y303 409 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 LIPGQ9Y5X9 500 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 PNPP00491 289 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 FABP4P15090 132 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 RAB5AP20339 215 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 MAGEA5P43359 124 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 FGF8P55075 233 aaPredicted RBP12.08□□□□□ -0.48
SPAST-201ENST00000315285 CEBPEQ15744 281 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 IFT22Q9H7X7 185 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 IGLV1-36A0A0B4J1U3 117 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 CDRT15L2A8MXV6 281 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 CDS2O95674 445 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 HLA-DRB3P79483 266 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 MPV17LQ2QL34 196 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 STUMQ69YW2 141 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 OR10D4PQ8NGN7 298 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 LRFN3Q9BTN0 628 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 ZNF835Q9Y2P0 537 aa12.08□□□□□ -0.48
SPAST-201ENST00000315285 GNG10P50151 68 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 TMEM65Q6PI78 240 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 SLC36A1Q7Z2H8 476 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 OR10G4Q8NGN3 311 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 OR10G9Q8NGN4 311 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 OR10G7Q8NGN6 311 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 FAM210BQ96KR6 192 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 ATP5SQ99766 215 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 HDHD3Q9BSH5 251 aaPredicted RBP12.07□□□□□ -0.48
SPAST-201ENST00000315285 TMEM147Q9BVK8 224 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 GPR87Q9BY21 358 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 CLCF1Q9UBD9 225 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 BRCA1P38398 1863 aaKnown RBP12.07□□□□□ -0.48
SPAST-201ENST00000315285 NDUFB3O43676 98 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 CDC34P49427 236 aaPredicted RBP12.07□□□□□ -0.48
SPAST-201ENST00000315285 SPINK9Q5DT21 86 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 FBXO17Q96EF6 278 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 CHRDL1Q9BU40 450 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 TMPRSS5Q9H3S3 457 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 TRGV8A0A0C4DH27 118 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 SOX15O60248 233 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 ARL16Q0P5N6 197 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 FOXO1Q12778 655 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 C3AR1Q16581 482 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 ATP6V1FQ16864 119 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 LRRC10Q5BKY1 277 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 DYRK2Q92630 601 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 GALR1P47211 349 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 RAB7AP51149 207 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 CXXC4Q9H2H0 198 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms