RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 TMEM38BQ9NVV0 291 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 CABIN1Q9Y6J0 2220 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 LOC102723996A0A087X1L8 192 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 ZNF816-ZNF321PA0A0X1KG74 233 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 IGSF23A1L1A6 192 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 CLEC18AA5D8T8 446 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 ZNF729A6NN14 1252 aaPredicted RBP11.97□□□□□ -0.49
MKS1-201ENST00000313863 B4DEV8 164 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 F10P00742 488 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 TK1P04183 234 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 SRP19P09132 144 aaKnown RBP11.97□□□□□ -0.49
MKS1-201ENST00000313863 CEACAM1P13688 526 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 HTR5AP47898 357 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 SSTP61278 116 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 PLCXD3Q63HM9 321 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 MRPL14Q6P1L8 145 aaKnown RBP11.97□□□□□ -0.49
MKS1-201ENST00000313863 SLC35E3Q7Z769 313 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 TMEM252Q8N6L7 170 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 ZFP62Q8NB50 900 aaPredicted RBP11.97□□□□□ -0.49
MKS1-201ENST00000313863 CLEC18CQ8NCF0 446 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 DYRK2Q92630 601 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 SLAMF9Q96A28 289 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 RAB39BQ96DA2 213 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 TVP23CQ96ET8 276 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 RARRES2Q99969 163 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 NIPSNAP3BQ9BS92 247 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 DUSP23Q9BVJ7 150 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 PARPBPQ9NWS1 579 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 MED12Q93074 2177 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 CEP290O15078 2479 aa11.97□□□□□ -0.49
MKS1-201ENST00000313863 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 IGKV1-12A0A0C4DH73 117 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 A0A1B0GV50 99 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 hCG_38984A0A1B0GV85 526 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 FAM221AA4D161 298 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 RPL36A-HNRNPH2H7BZ11 118 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 GPR37O15354 613 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 TGOLN2O43493 480 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 CBR3O75828 277 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 IGKV1D-12P01611 117 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 GLI4P10075 376 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 S100GP29377 79 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 SSR4P51571 173 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 CLDN15P56746 228 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 PCOLCEQ15113 449 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 SPSB3Q6PJ21 355 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 TBC1D26Q86UD7 250 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 ZNF429Q86V71 674 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 ZNF610Q8N9Z0 462 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 OR10G4Q8NGN3 311 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 OR13D1Q8NGV5 346 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 MR1Q95460 341 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 IL22RA2Q969J5 263 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 SHANK1Q9Y566 2161 aa11.96□□□□□ -0.49
MKS1-201ENST00000313863 ZNF724A8MTY0 619 aa11.96□□□□□ -0.5
MKS1-201ENST00000313863 SSSCA1O60232 199 aa11.96□□□□□ -0.5
MKS1-201ENST00000313863 ZIC3O60481 467 aa11.96□□□□□ -0.5
MKS1-201ENST00000313863 DFFBO76075 338 aa11.96□□□□□ -0.5
MKS1-201ENST00000313863 SCAF4O95104 1147 aaKnown RBP11.96□□□□□ -0.5
MKS1-201ENST00000313863 ZNF205O95201 554 aa11.96□□□□□ -0.5
MKS1-201ENST00000313863 CTXN2P0C2S0 81 aa11.96□□□□□ -0.5
MKS1-201ENST00000313863 VDAC1P21796 283 aa11.96□□□□□ -0.5
MKS1-201ENST00000313863 RAC3P60763 192 aa11.96□□□□□ -0.5
MKS1-201ENST00000313863 IL24Q13007 206 aa11.96□□□□□ -0.5
MKS1-201ENST00000313863 KHDC3LQ587J8 217 aa11.96□□□□□ -0.5
MKS1-201ENST00000313863 SPIN3Q5JUX0 258 aa11.96□□□□□ -0.5
MKS1-201ENST00000313863 SELENOHQ8IZQ5 122 aaKnown RBP11.96□□□□□ -0.5
MKS1-201ENST00000313863 IL22RA1Q8N6P7 574 aa11.96□□□□□ -0.5
MKS1-201ENST00000313863 OR5C1Q8NGR4 320 aa11.96□□□□□ -0.5
MKS1-201ENST00000313863 KCNE4Q8WWG9 221 aa11.96□□□□□ -0.5
MKS1-201ENST00000313863 GGACTQ9BVM4 153 aa11.96□□□□□ -0.5
MKS1-201ENST00000313863 A0A0J9YW62 118 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 HSD17B6O14756 317 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 TNFSF11O14788 317 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 OR7C1O76099 320 aaPredicted RBP11.95□□□□□ -0.5
MKS1-201ENST00000313863 ZNF32P17041 273 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 GNRHRP30968 328 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 ZNF674Q2M3X9 581 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 ACER2Q5QJU3 275 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 BRICD5Q6PL45 260 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 M1APQ8TC57 530 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 CPNE4Q96A23 557 aaPredicted RBP11.95□□□□□ -0.5
MKS1-201ENST00000313863 CRLF2Q9HC73 371 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 GAR1Q9NY12 217 aaKnown RBP11.95□□□□□ -0.5
MKS1-201ENST00000313863 ZNF581Q9P0T4 197 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 CA14Q9ULX7 337 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 WSB1Q9Y6I7 421 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 ELOA3CA0A087WX78 387 aaPredicted RBP11.95□□□□□ -0.5
MKS1-201ENST00000313863 IGHV5-10-1A0A0J9YXX1 117 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 KIR2DS1A0A191URI9 304 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 SEC14L6B5MCN3 397 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 KIR2DS4P43632 304 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 DYNLT3P51808 116 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 ICAM4Q14773 271 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 KIR2DS1Q14954 304 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 NCMAPQ5T1S8 102 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 CMTM1Q8IZ96 169 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 Q8NFD4 153 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 AKR7LQ8NHP1 331 aa11.95□□□□□ -0.5
MKS1-201ENST00000313863 PIGCQ92535 297 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms