RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.81□□□□□ -1.16
COL6A5-202ENST00000312481 AMIGO3Q86WK7 504 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 OR5B3Q8NH48 314 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 GSX1Q9H4S2 264 aaPredicted RBP7.81□□□□□ -1.16
COL6A5-202ENST00000312481 MRM2Q9UI43 246 aaKnown RBP7.81□□□□□ -1.16
COL6A5-202ENST00000312481 TRBV5-7A0A0A0MS05 114 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 CRYAAP02489 173 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 OR5G3P0C626 314 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 RPS20P60866 119 aaKnown RBP7.81□□□□□ -1.16
COL6A5-202ENST00000312481 MAMSTRQ6ZN01 415 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 BADQ92934 168 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 HINT2Q9BX68 163 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 FBXL17Q9UF56 701 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 FCMRO60667 390 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 HOXD11P31277 338 aaPredicted RBP7.81□□□□□ -1.16
COL6A5-202ENST00000312481 CDC34P49427 236 aaPredicted RBP7.81□□□□□ -1.16
COL6A5-202ENST00000312481 MARCH3Q86UD3 253 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.81□□□□□ -1.16
COL6A5-202ENST00000312481 ZNF737O75373 536 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 MEF2BQ02080 365 aaPredicted RBP7.81□□□□□ -1.16
COL6A5-202ENST00000312481 LRRC10Q5BKY1 277 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 NKAIN2Q5VXU1 208 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 OR8G2PQ6IF36 304 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 EXTL1Q92935 676 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 MS4A10Q96PG2 267 aa7.81□□□□□ -1.16
COL6A5-202ENST00000312481 STATHP02808 62 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 DEFA4P12838 97 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 GNB3P16520 340 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 MAT1AQ00266 395 aaKnown RBP7.8□□□□□ -1.16
COL6A5-202ENST00000312481 ACSF3Q4G176 576 aaPredicted RBP7.8□□□□□ -1.16
COL6A5-202ENST00000312481 PDZD11Q5EBL8 140 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 BEX5Q5H9J7 111 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 Q6AWC8 147 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 THNSL2Q86YJ6 484 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 IFI44Q8TCB0 444 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 PLSCR2Q9NRY7 297 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 ATG2AQ2TAZ0 1938 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 A0A087X0M5 115 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 A0A1B0GX30 115 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 LIPT2A6NK58 231 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 PPP2CBP62714 309 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 PPP2CAP67775 309 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 FAM90A1Q86YD7 464 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 DOLPP1Q86YN1 238 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 PKIBQ9C010 78 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 MIXL1Q9H2W2 232 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 B4E171 279 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 NUPL2O15504 423 aaKnown RBP7.8□□□□□ -1.16
COL6A5-202ENST00000312481 TLE1Q04724 770 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 RIGQ13278 110 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 CDKN3Q16667 212 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 OR4C5Q8NGB2 326 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 ZCCHC14Q8WYQ9 949 aaKnown RBP7.8□□□□□ -1.16
COL6A5-202ENST00000312481 PIPOXQ9P0Z9 390 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 TUBD1Q9UJT1 453 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 EXPH5Q8NEV8 1989 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 hADV38S2A0JD32 116 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 RND3P61587 244 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 TMEM217Q8N7C4 229 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 TRAV17A0A0B4J275 112 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 SIRPB1O00241 398 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 RER1O15258 196 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 GAMTQ14353 236 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 HFEQ30201 348 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 ZNF362Q5T0B9 420 aaPredicted RBP7.8□□□□□ -1.16
COL6A5-202ENST00000312481 METTL27Q8N6F8 245 aaPredicted RBP7.8□□□□□ -1.16
COL6A5-202ENST00000312481 TCRBV16S1A1N1A0A5B0 115 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 SYNGR2O43760 224 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 FABP9Q0Z7S8 132 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 PRSS50Q9UI38 385 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 PRRX1P54821 245 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 AKR7A3O95154 331 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 CLDN2P57739 230 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 FAM122AQ96E09 287 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 DYNLRB1Q9NP97 96 aa7.8□□□□□ -1.16
COL6A5-202ENST00000312481 RCC2Q9P258 522 aaKnown RBP7.8□□□□□ -1.16
COL6A5-202ENST00000312481 ANKHD1Q8IWZ3 2542 aaKnown RBP7.79□□□□□ -1.16
COL6A5-202ENST00000312481 MALRD1Q5VYJ5 2156 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 NDUFA2O43678 99 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 ASAH2BP0C7U1 165 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 DANCRP0C864 163 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 EMDP50402 254 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 OR10X1Q8NGY0 326 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 WFDC5Q8TCV5 224 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 FITM1A5D6W6 292 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 SLC2A10O95528 541 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 PPYP01298 95 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 AGFG1P52594 562 aaKnown RBP7.79□□□□□ -1.16
COL6A5-202ENST00000312481 PRSS45Q7RTY3 260 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 ZNF547Q8IVP9 402 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 TMEM222Q9H0R3 208 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 SLC6A13Q9NSD5 602 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 CISD1Q9NZ45 108 aaKnown RBP7.79□□□□□ -1.16
COL6A5-202ENST00000312481 OR2J2O76002 312 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 OR5AL1P0C617 328 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 FOLR2P14207 255 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 CA7P43166 264 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 ETFDHQ16134 617 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 FFAR4Q5NUL3 377 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 D2HGDHQ8N465 521 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms