RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 ADAP1O75689 374 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 PDGFBP01127 241 aaPredicted RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 MMP9P14780 707 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 SHC1P29353 583 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 HRH1P35367 487 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 BAK1Q16611 211 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 OR2G6Q5TZ20 316 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 DPPA3Q6W0C5 159 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 Q6ZT83 130 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 RIMKLAQ8IXN7 391 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF683Q8IZ20 524 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 LINC01555Q8NAE3 123 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 RXFP4Q8TDU9 374 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 ROBO4Q8WZ75 1007 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 RBPMSQ93062 196 aaKnown RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 SCARF2Q96GP6 870 aaPredicted RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF714Q96N38 554 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 GSX2Q9BZM3 304 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 NYNRINQ9P2P1 1898 aaKnown RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 FAM74A7A6NL05 159 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 NPIPB6E9PJ23 425 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 K7ESF4 209 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 CTSVO60911 334 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 MITFO75030 526 aaPredicted RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 CPN1P15169 458 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 HTR1DP28221 377 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 CD96P40200 585 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 BAMBIQ13145 260 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 HLXQ14774 488 aaPredicted RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 TMEM215Q68D42 235 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 MRM1Q6IN84 353 aaKnown RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 RBPMS2Q6ZRY4 209 aaKnown RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 NCCRP1Q6ZVX7 275 aaPredicted RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 OR8I2Q8N0Y5 310 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 PNPLA1Q8N8W4 532 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 OR4C13Q8NGP0 309 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 TAS2R4Q9NYW5 299 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 SLC25A10Q9UBX3 287 aaPredicted RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 OPN4Q9UHM6 478 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 GOLT1BQ9Y3E0 138 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 CBY1Q9Y3M2 126 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 A0A0U1RQK1 487 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 J3QT63 122 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 BMPR1BO00238 502 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 PPP6CO00743 305 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 SYNGR1O43759 233 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 LYZL6O75951 148 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 MYOD1P15172 320 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 HIST1H1DP16402 221 aaKnown RBP2.81□□□□□ -1.96
CLOCK-201ENST00000309964 GCAP28676 217 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 AMTP48728 403 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF117Q03924 483 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 FAM106AQ4KMX7 169 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF385CQ66K41 422 aaPredicted RBP2.81□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF770Q6IQ21 691 aaPredicted RBP2.81□□□□□ -1.96
CLOCK-201ENST00000309964 PDPNQ86YL7 162 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 LAX1Q8IWV1 398 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 MMD2Q8IY49 270 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 TMEM130Q8N3G9 435 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 GCSAMQ8N6F7 178 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 ANGPTL4Q9BY76 406 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 EXOGQ9Y2C4 368 aaKnown RBP2.81□□□□□ -1.96
CLOCK-201ENST00000309964 MRPS16Q9Y3D3 137 aaKnown RBP2.81□□□□□ -1.96
CLOCK-201ENST00000309964 A0A1B0GU03 582 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 B3GALT4O96024 378 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 CTSDP07339 412 aaPredicted RBP2.81□□□□□ -1.96
CLOCK-201ENST00000309964 STAG3L2P0CL84 134 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 CTRB1P17538 263 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 TMEM268Q5VZI3 342 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 CTRB2Q6GPI1 263 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 MRGPRGQ86SM5 289 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 LILRA3Q8N6C8 439 aaPredicted RBP2.81□□□□□ -1.96
CLOCK-201ENST00000309964 WDR31Q8NA23 367 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 UBE2FQ969M7 185 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 ABHD1Q96SE0 405 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 RNF122Q9H9V4 155 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 RANGRFQ9HD47 186 aaPredicted RBP2.81□□□□□ -1.96
CLOCK-201ENST00000309964 SLC7A10Q9NS82 523 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 TMEM38BQ9NVV0 291 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 SLC2A8Q9NY64 477 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 MED13Q9UHV7 2174 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 NCOA6Q14686 2063 aaPredicted RBP2.81□□□□□ -1.96
CLOCK-201ENST00000309964 B4DEV8 164 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 MGST3O14880 152 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 SSSCA1O60232 199 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 DEDDO75618 318 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 MUC1P15941 1255 aaPredicted RBP2.81□□□□□ -1.96
CLOCK-201ENST00000309964 CA6P23280 308 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 EMDP50402 254 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 ZIC1Q15915 447 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 RRN3P1Q2M238 152 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 CYB5R2Q6BCY4 276 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 EBLN2Q6P2I7 272 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 ACSM6Q6P461 480 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 SYT8Q8NBV8 401 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 ZPLD1Q8TCW7 415 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 RPS4Y2Q8TD47 263 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 GPR119Q8TDV5 335 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 MZB1Q8WU39 189 aa2.81□□□□□ -1.96
CLOCK-201ENST00000309964 ASB10Q8WXI3 467 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms