RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 SCGB1C1Q8TD33 95 aa12.69□□□□□ -0.38
PTPN9-201ENST00000306726 NECAP2Q9NVZ3 263 aa12.69□□□□□ -0.38
PTPN9-201ENST00000306726 LNP1A1A4G5 178 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 H3BQ15 152 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 MSTNO14793 375 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 ACP1P24666 158 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 HAAOP46952 286 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 OPN5Q6U736 354 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 C5orf46Q6UWT4 87 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 SEMA5BQ9P283 1151 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 E5RGE8 158 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 GPM6AP51674 278 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 DLK1P80370 383 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 RAB39BQ96DA2 213 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 SLC35B3Q9H1N7 401 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 ZNF286AQ9HBT8 521 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 SRPK3Q9UPE1 567 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 NSG2Q9Y328 171 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 ASPMQ8IZT6 3477 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 AP4M1O00189 453 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 NRASP01111 189 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 ZNF32P17041 273 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 DYNLT3P51808 116 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 OR1J1Q8NGS3 322 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 ZNF251Q9BRH9 671 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 OPA3Q9H6K4 179 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 CACFD1Q9UGQ2 172 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 WSB1Q9Y6I7 421 aa12.68□□□□□ -0.38
PTPN9-201ENST00000306726 TUSC2O75896 110 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 IL2RAP01589 272 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 IFNA4P05014 189 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 RBP2P50120 134 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 CFHR1Q03591 330 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 ZNF808Q8N4W9 903 aaPredicted RBP12.67□□□□□ -0.38
PTPN9-201ENST00000306726 PIEZO2Q9H5I5 2752 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 DHHO43323 396 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 CYTIPO60759 359 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 SELEP16581 610 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 SULT1A2P50226 295 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 SPEM2Q0P670 501 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 SPNS3Q6ZMD2 512 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 OR5L2Q8NGL0 311 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 TMEM204Q9BSN7 226 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 LIME1Q9H400 295 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 GAR1Q9NY12 217 aaKnown RBP12.67□□□□□ -0.38
PTPN9-201ENST00000306726 DOK5Q9P104 306 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 GTF3C1Q12789 2109 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 ANKUB1A6NFN9 424 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 GPR137BO60478 399 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 IFNA5P01569 189 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 KLK3P07288 261 aaPredicted RBP12.67□□□□□ -0.38
PTPN9-201ENST00000306726 ERVS71-1P61550 626 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 AAED1Q7RTV5 226 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 RHBDD1Q8TEB9 315 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 RBMXL1Q96E39 390 aaKnown RBP12.67□□□□□ -0.38
PTPN9-201ENST00000306726 MYOTQ9UBF9 498 aa12.67□□□□□ -0.38
PTPN9-201ENST00000306726 A0A1W2PPQ1 181 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 CCL3P10147 92 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 FSTP19883 344 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 CEACAM16Q2WEN9 425 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 HIST1H2AAQ96QV6 131 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 TP53RKQ96S44 253 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 SMOC1Q9H4F8 434 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 CCL28Q9NRJ3 127 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 BDP1A6H8Y1 2624 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 FTCDNL1E5RQL4 147 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 MFNGO00587 321 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 CHST1O43916 411 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 EGR1P18146 543 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 SCAND1P57086 179 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 ECH1Q13011 328 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 WIPI1Q5MNZ9 446 aaPredicted RBP12.66□□□□□ -0.38
PTPN9-201ENST00000306726 ANKRD37Q7Z713 158 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 CXorf67Q86X51 503 aaPredicted RBP12.66□□□□□ -0.38
PTPN9-201ENST00000306726 C12orf49Q9H741 205 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 MSL2Q9HCI7 577 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 DLL1O00548 723 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 LDLRAD4O15165 306 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 FGF16O43320 207 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 TK1P04183 234 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 SCTP09683 121 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 OR2C3Q8N628 320 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 IFI44Q8TCB0 444 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 GGACTQ9BVM4 153 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 SLC7A10Q9NS82 523 aa12.66□□□□□ -0.38
PTPN9-201ENST00000306726 TMEM131Q92545 1883 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 TP53I11O14683 189 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 MSX1P28360 303 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 UBE2G2P60604 165 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 DCDP81605 110 aaKnown RBP12.65□□□□□ -0.38
PTPN9-201ENST00000306726 C3AR1Q16581 482 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 MCEMP1Q8IX19 187 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 LYZL4Q96KX0 146 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 NAA60Q9H7X0 242 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 B3GAT1Q9P2W7 334 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 BLACEA4D250 179 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 EWSR1Q01844 656 aaKnown RBP eCLIP12.65□□□□□ -0.38
PTPN9-201ENST00000306726 SURF2Q15527 256 aaPredicted RBP12.65□□□□□ -0.38
PTPN9-201ENST00000306726 GAPTQ8N292 157 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 RASL10BQ96S79 203 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms