RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 B3GALNT1O75752 331 aa14□□□□□ -0.17
USP42-201ENST00000306177 SPP1P10451 314 aa14□□□□□ -0.17
USP42-201ENST00000306177 FAM3AP98173 230 aa14□□□□□ -0.17
USP42-201ENST00000306177 MPV17LQ2QL34 196 aa14□□□□□ -0.17
USP42-201ENST00000306177 FAM103A1Q9BTL3 118 aaKnown RBP14□□□□□ -0.17
USP42-201ENST00000306177 ST6GALNAC2Q9UJ37 374 aa14□□□□□ -0.17
USP42-201ENST00000306177 SLC45A2Q9UMX9 530 aa14□□□□□ -0.17
USP42-201ENST00000306177 ZNF785A8K8V0 405 aa14□□□□□ -0.17
USP42-201ENST00000306177 SEC14L6B5MCN3 397 aa14□□□□□ -0.17
USP42-201ENST00000306177 SP1P08047 785 aa14□□□□□ -0.17
USP42-201ENST00000306177 ASAH2BP0C7U1 165 aa14□□□□□ -0.17
USP42-201ENST00000306177 CEACAM3P40198 252 aa14□□□□□ -0.17
USP42-201ENST00000306177 ZFP36L2P47974 494 aaKnown RBP14□□□□□ -0.17
USP42-201ENST00000306177 RGPD3A6NKT7 1758 aaPredicted RBP14□□□□□ -0.17
USP42-201ENST00000306177 LANCL1O43813 399 aa14□□□□□ -0.17
USP42-201ENST00000306177 COX7A1P24310 79 aa14□□□□□ -0.17
USP42-201ENST00000306177 TMEM18Q96B42 140 aa14□□□□□ -0.17
USP42-201ENST00000306177 TMEM147Q9BVK8 224 aa14□□□□□ -0.17
USP42-201ENST00000306177 TINAGQ9UJW2 476 aa14□□□□□ -0.17
USP42-201ENST00000306177 SRCAPQ6ZRS2 3230 aa14□□□□□ -0.17
USP42-201ENST00000306177 FOXO1Q12778 655 aa13.99□□□□□ -0.17
USP42-201ENST00000306177 IL24Q13007 206 aa13.99□□□□□ -0.17
USP42-201ENST00000306177 FBXW9Q5XUX1 488 aa13.99□□□□□ -0.17
USP42-201ENST00000306177 ZPLD1Q8TCW7 415 aa13.99□□□□□ -0.17
USP42-201ENST00000306177 RND1Q92730 232 aa13.99□□□□□ -0.17
USP42-201ENST00000306177 GMPPAQ96IJ6 420 aaPredicted RBP13.99□□□□□ -0.17
USP42-201ENST00000306177 APC2O95996 2303 aa13.99□□□□□ -0.17
USP42-201ENST00000306177 HIKESHIQ53FT3 197 aa13.99□□□□□ -0.17
USP42-201ENST00000306177 INO80CQ6PI98 192 aaPredicted RBP13.99□□□□□ -0.17
USP42-201ENST00000306177 CLRN3Q8NCR9 226 aa13.99□□□□□ -0.17
USP42-201ENST00000306177 SEBOXQ9HB31 216 aaPredicted RBP13.99□□□□□ -0.17
USP42-201ENST00000306177 DXOO77932 396 aaKnown RBP13.99□□□□□ -0.17
USP42-201ENST00000306177 VSIG8P0DPA2 414 aa13.99□□□□□ -0.17
USP42-201ENST00000306177 ACSM6Q6P461 480 aa13.99□□□□□ -0.17
USP42-201ENST00000306177 OR5A2Q8NGI9 324 aa13.99□□□□□ -0.17
USP42-201ENST00000306177 GDF15Q99988 308 aa13.99□□□□□ -0.17
USP42-201ENST00000306177 TGIF2Q9GZN2 237 aa13.99□□□□□ -0.17
USP42-201ENST00000306177 CA10Q9NS85 328 aa13.99□□□□□ -0.17
USP42-201ENST00000306177 TMEM33P57088 247 aa13.99□□□□□ -0.17
USP42-201ENST00000306177 MRPS11P82912 194 aaKnown RBP13.99□□□□□ -0.17
USP42-201ENST00000306177 ZNF385AQ96PM9 386 aaKnown RBP13.99□□□□□ -0.17
USP42-201ENST00000306177 TTTY12Q9BZ98 90 aa13.99□□□□□ -0.17
USP42-201ENST00000306177 ZMIZ1Q9ULJ6 1067 aa13.99□□□□□ -0.17
USP42-201ENST00000306177 CSF2RBP32927 897 aa13.98□□□□□ -0.17
USP42-201ENST00000306177 OR4F17Q8NGA8 305 aa13.98□□□□□ -0.17
USP42-201ENST00000306177 ST6GAL2Q96JF0 529 aa13.98□□□□□ -0.17
USP42-201ENST00000306177 ZNF426Q9BUY5 554 aa13.98□□□□□ -0.17
USP42-201ENST00000306177 LRRC3CA6NJW4 275 aa13.98□□□□□ -0.17
USP42-201ENST00000306177 AGFG2O95081 481 aa13.98□□□□□ -0.17
USP42-201ENST00000306177 CD1AP06126 327 aa13.98□□□□□ -0.17
USP42-201ENST00000306177 POLR2GP62487 172 aaKnown RBP eCLIP13.98□□□□□ -0.17
USP42-201ENST00000306177 KLF9Q13886 244 aaPredicted RBP13.98□□□□□ -0.17
USP42-201ENST00000306177 TIPARPQ7Z3E1 657 aaKnown RBP13.98□□□□□ -0.17
USP42-201ENST00000306177 SLC25A42Q86VD7 318 aa13.98□□□□□ -0.17
USP42-201ENST00000306177 PMELP40967 661 aa13.98□□□□□ -0.17
USP42-201ENST00000306177 P2RY1P47900 373 aa13.98□□□□□ -0.17
USP42-201ENST00000306177 BTNL3Q6UXE8 466 aa13.98□□□□□ -0.17
USP42-201ENST00000306177 BCL2L2Q92843 193 aaPredicted RBP13.98□□□□□ -0.17
USP42-201ENST00000306177 PLXNA1Q9UIW2 1896 aa13.98□□□□□ -0.17
USP42-201ENST00000306177 TMPRSS2O15393 492 aa13.98□□□□□ -0.17
USP42-201ENST00000306177 TSPAN2O60636 221 aa13.98□□□□□ -0.17
USP42-201ENST00000306177 PPYP01298 95 aa13.98□□□□□ -0.17
USP42-201ENST00000306177 RPS4XP62701 263 aaKnown RBP13.98□□□□□ -0.17
USP42-201ENST00000306177 RHOBP62745 196 aa13.98□□□□□ -0.17
USP42-201ENST00000306177 SPINK9Q5DT21 86 aa13.98□□□□□ -0.17
USP42-201ENST00000306177 VSTM2AQ8TAG5 236 aa13.98□□□□□ -0.17
USP42-201ENST00000306177 DHRS9Q9BPW9 319 aa13.98□□□□□ -0.17
USP42-201ENST00000306177 SLC35B3Q9H1N7 401 aa13.98□□□□□ -0.17
USP42-201ENST00000306177 CRHP06850 196 aa13.97□□□□□ -0.17
USP42-201ENST00000306177 BMI1P35226 326 aa13.97□□□□□ -0.17
USP42-201ENST00000306177 LIMS1P48059 325 aa13.97□□□□□ -0.17
USP42-201ENST00000306177 CDC34P49427 236 aaPredicted RBP13.97□□□□□ -0.17
USP42-201ENST00000306177 TSPO2Q5TGU0 170 aa13.97□□□□□ -0.17
USP42-201ENST00000306177 MOGAT3Q86VF5 341 aa13.97□□□□□ -0.17
USP42-201ENST00000306177 ZNRF4Q8WWF5 429 aa13.97□□□□□ -0.17
USP42-201ENST00000306177 ADAT3Q96EY9 351 aaPredicted RBP13.97□□□□□ -0.17
USP42-201ENST00000306177 SLC31A2O15432 143 aa13.97□□□□□ -0.17
USP42-201ENST00000306177 RAB5AP20339 215 aa13.97□□□□□ -0.17
USP42-201ENST00000306177 GZMHP20718 246 aa13.97□□□□□ -0.17
USP42-201ENST00000306177 STARD6P59095 220 aa13.97□□□□□ -0.17
USP42-201ENST00000306177 SLC25A45Q8N413 288 aa13.97□□□□□ -0.17
USP42-201ENST00000306177 RNF7Q9UBF6 113 aa13.97□□□□□ -0.17
USP42-201ENST00000306177 IGHV3-13P01766 116 aa13.97□□□□□ -0.17
USP42-201ENST00000306177 IGHV3-7P01780 117 aa13.97□□□□□ -0.17
USP42-201ENST00000306177 SPINK2P20155 84 aa13.97□□□□□ -0.17
USP42-201ENST00000306177 VDAC1P21796 283 aa13.97□□□□□ -0.17
USP42-201ENST00000306177 LINC00596Q86U02 117 aa13.97□□□□□ -0.17
USP42-201ENST00000306177 R3HDM4Q96D70 268 aa13.97□□□□□ -0.17
USP42-201ENST00000306177 THYN1Q9P016 225 aa13.97□□□□□ -0.17
USP42-201ENST00000306177 SYNGR2O43760 224 aa13.97□□□□□ -0.17
USP42-201ENST00000306177 IFI6P09912 130 aa13.97□□□□□ -0.17
USP42-201ENST00000306177 INPP5JQ15735 1006 aaPredicted RBP13.97□□□□□ -0.17
USP42-201ENST00000306177 GAPTQ8N292 157 aa13.97□□□□□ -0.17
USP42-201ENST00000306177 SLC25A40Q8TBP6 338 aa13.97□□□□□ -0.17
USP42-201ENST00000306177 TMEM210A6NLX4 147 aa13.96□□□□□ -0.17
USP42-201ENST00000306177 CA11O75493 328 aa13.96□□□□□ -0.17
USP42-201ENST00000306177 OR10G4Q8NGN3 311 aa13.96□□□□□ -0.17
USP42-201ENST00000306177 OR10G9Q8NGN4 311 aa13.96□□□□□ -0.17
USP42-201ENST00000306177 OR10G7Q8NGN6 311 aa13.96□□□□□ -0.17
USP42-201ENST00000306177 SAP30LQ9HAJ7 183 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms